RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 WAPLQ7Z5K2 1190 aa20.34■□□□□ 0.85
CDK5RAP3-236ENST00000584991 MINK1Q8N4C8 1332 aaPredicted RBP20.32■□□□□ 0.84
CDK5RAP3-236ENST00000584991 PLEKHH1Q9ULM0 1364 aa20.32■□□□□ 0.84
CDK5RAP3-236ENST00000584991 TECPR2O15040 1411 aa20.32■□□□□ 0.84
CDK5RAP3-236ENST00000584991 TULP4Q9NRJ4 1543 aa20.32■□□□□ 0.84
CDK5RAP3-236ENST00000584991 EVC2Q86UK5 1308 aa20.32■□□□□ 0.84
CDK5RAP3-236ENST00000584991 PTPRUQ92729 1446 aa20.32■□□□□ 0.84
CDK5RAP3-236ENST00000584991 CPS1P31327 1500 aa20.31■□□□□ 0.84
CDK5RAP3-236ENST00000584991 MYOM1P52179 1685 aa20.31■□□□□ 0.84
CDK5RAP3-236ENST00000584991 SIRT1Q96EB6 747 aa20.3■□□□□ 0.84
CDK5RAP3-236ENST00000584991 PANK3Q9H999 370 aa20.29■□□□□ 0.84
CDK5RAP3-236ENST00000584991 FAM135BQ49AJ0 1406 aa20.28■□□□□ 0.84
CDK5RAP3-236ENST00000584991 NCKAP5LQ9HCH0 1330 aa20.28■□□□□ 0.84
CDK5RAP3-236ENST00000584991 ROBO2Q9HCK4 1378 aa20.28■□□□□ 0.84
CDK5RAP3-236ENST00000584991 AMOTL2Q9Y2J4 779 aa20.28■□□□□ 0.84
CDK5RAP3-236ENST00000584991 NPHP4O75161 1426 aaPredicted RBP20.27■□□□□ 0.84
CDK5RAP3-236ENST00000584991 CABP2Q9NPB3 220 aa20.26■□□□□ 0.83
CDK5RAP3-236ENST00000584991 ZBED9Q6R2W3 1325 aa20.25■□□□□ 0.83
CDK5RAP3-236ENST00000584991 PUS7Q96PZ0 661 aaKnown RBP20.25■□□□□ 0.83
CDK5RAP3-236ENST00000584991 PIK3R4Q99570 1358 aa20.25■□□□□ 0.83
CDK5RAP3-236ENST00000584991 PER1O15534 1290 aaPredicted RBP20.24■□□□□ 0.83
CDK5RAP3-236ENST00000584991 SRPK2P78362 688 aaKnown RBP20.24■□□□□ 0.83
CDK5RAP3-236ENST00000584991 CNGB1Q14028 1251 aaPredicted RBP20.24■□□□□ 0.83
CDK5RAP3-236ENST00000584991 XRN1Q8IZH2 1706 aaKnown RBP20.24■□□□□ 0.83
CDK5RAP3-236ENST00000584991 HSPA2P54652 639 aa20.23■□□□□ 0.83
CDK5RAP3-236ENST00000584991 CDK19Q9BWU1 502 aa20.23■□□□□ 0.83
CDK5RAP3-236ENST00000584991 CHD2O14647 1828 aaKnown RBP20.23■□□□□ 0.83
CDK5RAP3-236ENST00000584991 TMC1Q8TDI8 760 aa20.22■□□□□ 0.83
CDK5RAP3-236ENST00000584991 PTCH1Q13635 1447 aa20.21■□□□□ 0.83
CDK5RAP3-236ENST00000584991 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.2■□□□□ 0.83
CDK5RAP3-236ENST00000584991 SLC12A5Q9H2X9 1139 aa20.2■□□□□ 0.82
CDK5RAP3-236ENST00000584991 MRS2Q9HD23 443 aa20.2■□□□□ 0.82
CDK5RAP3-236ENST00000584991 LMTK3Q96Q04 1460 aa20.2■□□□□ 0.82
CDK5RAP3-236ENST00000584991 KCNA6P17658 529 aa20.2■□□□□ 0.82
CDK5RAP3-236ENST00000584991 KTN1Q86UP2 1357 aaKnown RBP20.18■□□□□ 0.82
CDK5RAP3-236ENST00000584991 ATAD2Q6PL18 1390 aa20.18■□□□□ 0.82
CDK5RAP3-236ENST00000584991 WASLO00401 505 aaPredicted RBP20.18■□□□□ 0.82
CDK5RAP3-236ENST00000584991 KNSTRNQ9Y448 316 aa20.17■□□□□ 0.82
CDK5RAP3-236ENST00000584991 ADGRB2O60241 1585 aa20.15■□□□□ 0.82
CDK5RAP3-236ENST00000584991 CARD14Q9BXL6 1004 aa20.14■□□□□ 0.81
CDK5RAP3-236ENST00000584991 CCDC184Q52MB2 194 aa20.13■□□□□ 0.81
CDK5RAP3-236ENST00000584991 CC2D1BQ5T0F9 858 aaKnown RBP20.13■□□□□ 0.81
CDK5RAP3-236ENST00000584991 NINLQ9Y2I6 1382 aa20.13■□□□□ 0.81
CDK5RAP3-236ENST00000584991 PPP4R2Q9NY27 417 aa20.12■□□□□ 0.81
CDK5RAP3-236ENST00000584991 STRCQ7RTU9 1775 aa20.11■□□□□ 0.81
CDK5RAP3-236ENST00000584991 ANKRD36BQ8N2N9 1353 aa20.11■□□□□ 0.81
CDK5RAP3-236ENST00000584991 RALBP1Q15311 655 aa20.11■□□□□ 0.81
CDK5RAP3-236ENST00000584991 AMER1Q5JTC6 1135 aaPredicted RBP20.11■□□□□ 0.81
CDK5RAP3-236ENST00000584991 FAM9BQ8IZU0 186 aa20.1■□□□□ 0.81
CDK5RAP3-236ENST00000584991 NUDT16Q96DE0 195 aaKnown RBP20.1■□□□□ 0.81
CDK5RAP3-236ENST00000584991 CABP1Q9NZU7 370 aa20.1■□□□□ 0.81
CDK5RAP3-236ENST00000584991 RBM19Q9Y4C8 960 aaKnown RBP20.1■□□□□ 0.81
CDK5RAP3-236ENST00000584991 PARD3Q8TEW0 1356 aa20.1■□□□□ 0.81
CDK5RAP3-236ENST00000584991 NSD3Q9BZ95 1437 aa20.09■□□□□ 0.81
CDK5RAP3-236ENST00000584991 NWD1Q149M9 1564 aa20.09■□□□□ 0.81
CDK5RAP3-236ENST00000584991 A0A1W2PP64 1363 aa20.08■□□□□ 0.8
CDK5RAP3-236ENST00000584991 SMG6Q86US8 1419 aaKnown RBP20.07■□□□□ 0.8
CDK5RAP3-236ENST00000584991 PRR36Q9H6K5 1346 aa20.07■□□□□ 0.8
CDK5RAP3-236ENST00000584991 CD163L1Q9NR16 1453 aa20.07■□□□□ 0.8
CDK5RAP3-236ENST00000584991 RBM33Q96EV2 1170 aaKnown RBP20.07■□□□□ 0.8
CDK5RAP3-236ENST00000584991 ANP32EQ9BTT0 268 aa20.07■□□□□ 0.8
CDK5RAP3-236ENST00000584991 TERF2IPQ9NYB0 399 aa20.07■□□□□ 0.8
CDK5RAP3-236ENST00000584991 ATP7BP35670 1465 aa20.06■□□□□ 0.8
CDK5RAP3-236ENST00000584991 NUTM2FA1L443 756 aa20.06■□□□□ 0.8
CDK5RAP3-236ENST00000584991 PPIP5K1Q6PFW1 1433 aa20.06■□□□□ 0.8
CDK5RAP3-236ENST00000584991 NPC1L1Q9UHC9 1359 aa20.06■□□□□ 0.8
CDK5RAP3-236ENST00000584991 MYBBP1AQ9BQG0 1328 aaKnown RBP20.06■□□□□ 0.8
CDK5RAP3-236ENST00000584991 NALCNQ8IZF0 1738 aa20.05■□□□□ 0.8
CDK5RAP3-236ENST00000584991 CCDC61Q9Y6R9 512 aa20.05■□□□□ 0.8
CDK5RAP3-236ENST00000584991 HDGFL2Q7Z4V5 671 aaPredicted RBP20.05■□□□□ 0.8
CDK5RAP3-236ENST00000584991 USP32Q8NFA0 1604 aa20.03■□□□□ 0.8
CDK5RAP3-236ENST00000584991 STRCP1A6NGW2 1772 aa20.03■□□□□ 0.8
CDK5RAP3-236ENST00000584991 RGPD8O14715 1765 aaPredicted RBP20.02■□□□□ 0.8
CDK5RAP3-236ENST00000584991 PROSER2Q86WR7 435 aaPredicted RBP20.02■□□□□ 0.8
CDK5RAP3-236ENST00000584991 TOPAZ1Q8N9V7 1692 aa20.02■□□□□ 0.79
CDK5RAP3-236ENST00000584991 CGNL1Q0VF96 1302 aa20.01■□□□□ 0.79
CDK5RAP3-236ENST00000584991 FMN2Q9NZ56 1722 aa20.01■□□□□ 0.79
CDK5RAP3-236ENST00000584991 NKTRP30414 1462 aaKnown RBP20.01■□□□□ 0.79
CDK5RAP3-236ENST00000584991 BRD4O60885 1362 aaPredicted RBP20.01■□□□□ 0.79
CDK5RAP3-236ENST00000584991 CDC42BPGQ6DT37 1551 aa20■□□□□ 0.79
CDK5RAP3-236ENST00000584991 ADGRL3Q9HAR2 1447 aa20■□□□□ 0.79
CDK5RAP3-236ENST00000584991 ITSN1Q15811 1721 aa19.99■□□□□ 0.79
CDK5RAP3-236ENST00000584991 C14orf37Q86TY3 774 aa19.99■□□□□ 0.79
CDK5RAP3-236ENST00000584991 CPSF1Q10570 1443 aaKnown RBP19.99■□□□□ 0.79
CDK5RAP3-236ENST00000584991 AKAP12Q02952 1782 aa19.98■□□□□ 0.79
CDK5RAP3-236ENST00000584991 NLRP13Q86W25 1043 aa19.98■□□□□ 0.79
CDK5RAP3-236ENST00000584991 PNISRQ8TF01 805 aaKnown RBP19.98■□□□□ 0.79
CDK5RAP3-236ENST00000584991 RNF123Q5XPI4 1314 aa19.98■□□□□ 0.79
CDK5RAP3-236ENST00000584991 FANCIQ9NVI1 1328 aa19.98■□□□□ 0.79
CDK5RAP3-236ENST00000584991 PLEKHG3A1L390 1219 aa19.96■□□□□ 0.79
CDK5RAP3-236ENST00000584991 PPP2R1AP30153 589 aa19.96■□□□□ 0.79
CDK5RAP3-236ENST00000584991 NUDCQ9Y266 331 aa19.96■□□□□ 0.79
CDK5RAP3-236ENST00000584991 ANKARQ7Z5J8 1434 aa19.96■□□□□ 0.79
CDK5RAP3-236ENST00000584991 MON2Q7Z3U7 1717 aa19.95■□□□□ 0.78
CDK5RAP3-236ENST00000584991 MORC1Q86VD1 984 aa19.95■□□□□ 0.78
CDK5RAP3-236ENST00000584991 NSD2O96028 1365 aa19.95■□□□□ 0.78
CDK5RAP3-236ENST00000584991 ACEP12821 1306 aa19.94■□□□□ 0.78
CDK5RAP3-236ENST00000584991 KIF20BQ96Q89 1820 aa19.94■□□□□ 0.78
CDK5RAP3-236ENST00000584991 INSRP06213 1382 aa19.94■□□□□ 0.78
CDK5RAP3-236ENST00000584991 PMFBP1Q8TBY8 1022 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms