RNA–Protein interactions for RNA: ENST00000584811.5

TVP23C-210, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-210ENST00000584811 TULP4Q9NRJ4 1543 aa20.75■□□□□ 0.91
TVP23C-210ENST00000584811 RIMBP3CA6NJZ7 1639 aa20.74■□□□□ 0.91
TVP23C-210ENST00000584811 RIMBP3BA6NNM3 1639 aa20.74■□□□□ 0.91
TVP23C-210ENST00000584811 RIMBP3Q9UFD9 1639 aa20.74■□□□□ 0.91
TVP23C-210ENST00000584811 MTHFSP49914 203 aa20.74■□□□□ 0.91
TVP23C-210ENST00000584811 SLC52A1Q9NWF4 448 aa20.74■□□□□ 0.91
TVP23C-210ENST00000584811 ARHGAP31Q2M1Z3 1444 aa20.73■□□□□ 0.91
TVP23C-210ENST00000584811 ZC3H13Q5T200 1668 aaKnown RBP20.73■□□□□ 0.91
TVP23C-210ENST00000584811 SRPK2P78362 688 aaKnown RBP20.73■□□□□ 0.91
TVP23C-210ENST00000584811 EVC2Q86UK5 1308 aa20.73■□□□□ 0.91
TVP23C-210ENST00000584811 PRAM1Q96QH2 718 aa20.73■□□□□ 0.91
TVP23C-210ENST00000584811 BCAR3O75815 825 aa20.72■□□□□ 0.91
TVP23C-210ENST00000584811 STAG3Q9UJ98 1225 aa20.71■□□□□ 0.91
TVP23C-210ENST00000584811 ARHGEF28Q8N1W1 1705 aaKnown RBP20.69■□□□□ 0.9
TVP23C-210ENST00000584811 GGNBP2Q9H3C7 697 aa20.69■□□□□ 0.9
TVP23C-210ENST00000584811 CGNL1Q0VF96 1302 aa20.68■□□□□ 0.9
TVP23C-210ENST00000584811 DIP2BQ9P265 1576 aa20.68■□□□□ 0.9
TVP23C-210ENST00000584811 PREX1Q8TCU6 1659 aa20.68■□□□□ 0.9
TVP23C-210ENST00000584811 TRMT2AQ8IZ69 625 aaKnown RBP20.67■□□□□ 0.9
TVP23C-210ENST00000584811 POLR3AO14802 1390 aaPredicted RBP20.67■□□□□ 0.9
TVP23C-210ENST00000584811 POGKQ9P215 609 aa20.67■□□□□ 0.9
TVP23C-210ENST00000584811 TMEM131LA2VDJ0 1609 aa20.66■□□□□ 0.9
TVP23C-210ENST00000584811 WWC1Q8IX03 1113 aa20.66■□□□□ 0.9
TVP23C-210ENST00000584811 A0A1W2PP64 1363 aa20.66■□□□□ 0.9
TVP23C-210ENST00000584811 WAPLQ7Z5K2 1190 aa20.65■□□□□ 0.9
TVP23C-210ENST00000584811 FBLN1P23142 703 aa20.64■□□□□ 0.89
TVP23C-210ENST00000584811 TCP11L2Q8N4U5 519 aa20.64■□□□□ 0.89
TVP23C-210ENST00000584811 ANKRD36BQ8N2N9 1353 aa20.64■□□□□ 0.89
TVP23C-210ENST00000584811 PAK3O75914 559 aaPredicted RBP20.63■□□□□ 0.89
TVP23C-210ENST00000584811 PTPRMP28827 1452 aa20.62■□□□□ 0.89
TVP23C-210ENST00000584811 YTHDC2Q9H6S0 1430 aaKnown RBP20.61■□□□□ 0.89
TVP23C-210ENST00000584811 NPM2Q86SE8 214 aaKnown RBP20.61■□□□□ 0.89
TVP23C-210ENST00000584811 SHPRHQ149N8 1683 aa20.61■□□□□ 0.89
TVP23C-210ENST00000584811 E9PSI1 815 aa20.61■□□□□ 0.89
TVP23C-210ENST00000584811 U2AF1L5P0DN76 240 aaPredicted RBP20.6■□□□□ 0.89
TVP23C-210ENST00000584811 U2AF1Q01081 240 aaKnown RBP eCLIP20.6■□□□□ 0.89
TVP23C-210ENST00000584811 ZFYVE9O95405 1425 aa20.6■□□□□ 0.89
TVP23C-210ENST00000584811 NKTRP30414 1462 aaKnown RBP20.59■□□□□ 0.89
TVP23C-210ENST00000584811 CDK19Q9BWU1 502 aa20.59■□□□□ 0.89
TVP23C-210ENST00000584811 CABP1Q9NZU7 370 aa20.59■□□□□ 0.89
TVP23C-210ENST00000584811 ERICH6Q7L0X2 663 aa20.58■□□□□ 0.89
TVP23C-210ENST00000584811 RUNDC1Q96C34 613 aa20.58■□□□□ 0.89
TVP23C-210ENST00000584811 BCL2L13Q9BXK5 485 aa20.58■□□□□ 0.89
TVP23C-210ENST00000584811 FYB1O15117 783 aa20.58■□□□□ 0.88
TVP23C-210ENST00000584811 PDE4AP27815 886 aa20.57■□□□□ 0.88
TVP23C-210ENST00000584811 CLTCQ00610 1675 aaKnown RBP20.56■□□□□ 0.88
TVP23C-210ENST00000584811 U2SURPO15042 1029 aaKnown RBP20.56■□□□□ 0.88
TVP23C-210ENST00000584811 TNNQ9UQP3 1299 aa20.56■□□□□ 0.88
TVP23C-210ENST00000584811 ALKQ9UM73 1620 aa20.56■□□□□ 0.88
TVP23C-210ENST00000584811 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.55■□□□□ 0.886e-8■■■■□ 26.3
TVP23C-210ENST00000584811 PANK1Q8TE04 598 aa20.55■□□□□ 0.88
TVP23C-210ENST00000584811 CD163L1Q9NR16 1453 aa20.54■□□□□ 0.88
TVP23C-210ENST00000584811 KDM2BQ8NHM5 1336 aa20.54■□□□□ 0.88
TVP23C-210ENST00000584811 TCERG1O14776 1098 aaKnown RBP20.54■□□□□ 0.88
TVP23C-210ENST00000584811 NCKAP5LQ9HCH0 1330 aa20.54■□□□□ 0.88
TVP23C-210ENST00000584811 FRAT1Q92837 279 aaPredicted RBP20.54■□□□□ 0.88
TVP23C-210ENST00000584811 CFAP53Q96M91 514 aa20.54■□□□□ 0.88
TVP23C-210ENST00000584811 ABCC11Q96J66 1382 aa20.53■□□□□ 0.88
TVP23C-210ENST00000584811 A2ML1A8K2U0 1454 aa20.53■□□□□ 0.88
TVP23C-210ENST00000584811 PUS7Q96PZ0 661 aaKnown RBP20.52■□□□□ 0.88
TVP23C-210ENST00000584811 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.51■□□□□ 0.87
TVP23C-210ENST00000584811 BACH2Q9BYV9 841 aa20.51■□□□□ 0.87
TVP23C-210ENST00000584811 COG6Q9Y2V7 657 aa20.51■□□□□ 0.87
TVP23C-210ENST00000584811 IQSEC2Q5JU85 1478 aa20.51■□□□□ 0.87
TVP23C-210ENST00000584811 PPM1GO15355 546 aaPredicted RBP20.5■□□□□ 0.87
TVP23C-210ENST00000584811 TXNDC2Q86VQ3 553 aa20.5■□□□□ 0.87
TVP23C-210ENST00000584811 RIMS2Q9UQ26 1411 aa20.5■□□□□ 0.87
TVP23C-210ENST00000584811 ANP32AP39687 249 aaKnown RBP20.49■□□□□ 0.87
TVP23C-210ENST00000584811 TERF2IPQ9NYB0 399 aa20.49■□□□□ 0.87
TVP23C-210ENST00000584811 NOP58Q9Y2X3 529 aaKnown RBP20.49■□□□□ 0.87
TVP23C-210ENST00000584811 USP32Q8NFA0 1604 aa20.49■□□□□ 0.87
TVP23C-210ENST00000584811 PLPPR3Q6T4P5 718 aa20.49■□□□□ 0.87
TVP23C-210ENST00000584811 TSR2Q969E8 191 aaKnown RBP20.49■□□□□ 0.87
TVP23C-210ENST00000584811 PHF23Q9BUL5 403 aaPredicted RBP20.49■□□□□ 0.87
TVP23C-210ENST00000584811 METP08581 1390 aa20.48■□□□□ 0.87
TVP23C-210ENST00000584811 ATAD2Q6PL18 1390 aa20.47■□□□□ 0.87
TVP23C-210ENST00000584811 ARHGEF40Q8TER5 1519 aa20.47■□□□□ 0.87
TVP23C-210ENST00000584811 CANXP27824 592 aaKnown RBP20.47■□□□□ 0.87
TVP23C-210ENST00000584811 RGS3P49796 1198 aa20.47■□□□□ 0.87
TVP23C-210ENST00000584811 IGHDP01880 384 aa20.47■□□□□ 0.87
TVP23C-210ENST00000584811 ZRANB1Q9UGI0 708 aa20.47■□□□□ 0.87
TVP23C-210ENST00000584811 CLUAP1Q96AJ1 413 aa20.46■□□□□ 0.87
TVP23C-210ENST00000584811 IPO9Q96P70 1041 aaKnown RBP20.46■□□□□ 0.87
TVP23C-210ENST00000584811 NLRP1Q9C000 1473 aa20.46■□□□□ 0.87
TVP23C-210ENST00000584811 ZMYM3Q14202 1370 aa20.46■□□□□ 0.87
TVP23C-210ENST00000584811 RLBP1P12271 317 aa20.46■□□□□ 0.87
TVP23C-210ENST00000584811 RARSP54136 660 aaKnown RBP20.46■□□□□ 0.87
TVP23C-210ENST00000584811 NSD2O96028 1365 aa20.46■□□□□ 0.87
TVP23C-210ENST00000584811 ESF1Q9H501 851 aaKnown RBP20.45■□□□□ 0.86
TVP23C-210ENST00000584811 AGLP35573 1532 aa20.45■□□□□ 0.86
TVP23C-210ENST00000584811 HDGFL2Q7Z4V5 671 aaPredicted RBP20.44■□□□□ 0.86
TVP23C-210ENST00000584811 PLEKHF1Q96S99 279 aa20.44■□□□□ 0.86
TVP23C-210ENST00000584811 CENPQQ7L2Z9 268 aaPredicted RBP20.44■□□□□ 0.86
TVP23C-210ENST00000584811 NBR1Q14596 966 aa20.43■□□□□ 0.86
TVP23C-210ENST00000584811 SPATA31D1Q6ZQQ2 1576 aa20.42■□□□□ 0.86
TVP23C-210ENST00000584811 CEBPAP49715 358 aaPredicted RBP20.42■□□□□ 0.86
TVP23C-210ENST00000584811 NGEFQ8N5V2 710 aa20.42■□□□□ 0.86
TVP23C-210ENST00000584811 NUTM2FA1L443 756 aa20.41■□□□□ 0.86
TVP23C-210ENST00000584811 MS4A1P11836 297 aa20.41■□□□□ 0.86
TVP23C-210ENST00000584811 WDR63Q8IWG1 891 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms