RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-229ENST00000584754 GRIPAP1Q4V328 841 aa8.02□□□□□ -1.13
PPP4R1-229ENST00000584754 TBC1D2Q9BYX2 928 aa8.02□□□□□ -1.13
PPP4R1-229ENST00000584754 PCDHGC3Q9UN70 934 aa8.02□□□□□ -1.13
PPP4R1-229ENST00000584754 FMNL1O95466 1100 aaPredicted RBP8.01□□□□□ -1.13
PPP4R1-229ENST00000584754 SLC6A16Q9GZN6 736 aa8.01□□□□□ -1.13
PPP4R1-229ENST00000584754 USP46P62068 366 aa8□□□□□ -1.13
PPP4R1-229ENST00000584754 FDX1P10109 184 aa7.99□□□□□ -1.13
PPP4R1-229ENST00000584754 EMID1Q96A84 441 aaPredicted RBP7.99□□□□□ -1.13
PPP4R1-229ENST00000584754 KDM4CQ9H3R0 1056 aa7.99□□□□□ -1.13
PPP4R1-229ENST00000584754 PCDHB15Q9Y5E8 787 aa7.99□□□□□ -1.13
PPP4R1-229ENST00000584754 CSPP1Q1MSJ5 1256 aa7.98□□□□□ -1.13
PPP4R1-229ENST00000584754 PLA2G2CQ5R387 149 aa7.98□□□□□ -1.13
PPP4R1-229ENST00000584754 SLC19A1P41440 591 aa7.97□□□□□ -1.13
PPP4R1-229ENST00000584754 FAM117AQ9C073 453 aa7.97□□□□□ -1.13
PPP4R1-229ENST00000584754 C6orf229H3BNL8 230 aa7.96□□□□□ -1.14
PPP4R1-229ENST00000584754 Q3C1V9 767 aa7.96□□□□□ -1.14
PPP4R1-229ENST00000584754 PKDCCQ504Y2 493 aa7.96□□□□□ -1.14
PPP4R1-229ENST00000584754 USB1Q9BQ65 265 aaKnown RBP7.96□□□□□ -1.14
PPP4R1-229ENST00000584754 SALL2Q9Y467 1007 aaPredicted RBP7.96□□□□□ -1.14
PPP4R1-229ENST00000584754 LIAT1Q6ZQX7 453 aa7.95□□□□□ -1.14
PPP4R1-229ENST00000584754 ZNF775Q96BV0 537 aaPredicted RBP7.95□□□□□ -1.14
PPP4R1-229ENST00000584754 POLR3EQ9NVU0 708 aa7.95□□□□□ -1.14
PPP4R1-229ENST00000584754 FCF1Q9Y324 198 aaKnown RBP7.95□□□□□ -1.14
PPP4R1-229ENST00000584754 NEUROD2Q15784 382 aa7.94□□□□□ -1.14
PPP4R1-229ENST00000584754 MYSM1Q5VVJ2 828 aa7.94□□□□□ -1.14
PPP4R1-229ENST00000584754 RSBN1LQ6PCB5 846 aaPredicted RBP7.94□□□□□ -1.14
PPP4R1-229ENST00000584754 RIC3Q7Z5B4 369 aa7.94□□□□□ -1.14
PPP4R1-229ENST00000584754 LIMD1Q9UGP4 676 aa7.94□□□□□ -1.14
PPP4R1-229ENST00000584754 ANKLE1Q8NAG6 615 aa7.93□□□□□ -1.14
PPP4R1-229ENST00000584754 CABLES1Q8TDN4 633 aa7.93□□□□□ -1.14
PPP4R1-229ENST00000584754 PLEKHG3A1L390 1219 aa7.92□□□□□ -1.14
PPP4R1-229ENST00000584754 SPTLC1O15269 473 aa7.91□□□□□ -1.14
PPP4R1-229ENST00000584754 QPCTQ16769 361 aa7.91□□□□□ -1.14
PPP4R1-229ENST00000584754 MSS51Q4VC12 460 aa7.91□□□□□ -1.14
PPP4R1-229ENST00000584754 CCDC24Q8N4L8 307 aa7.91□□□□□ -1.14
PPP4R1-229ENST00000584754 IL27Q8NEV9 243 aa7.91□□□□□ -1.14
PPP4R1-229ENST00000584754 BRPF1P55201 1214 aaPredicted RBP7.9□□□□□ -1.14
PPP4R1-229ENST00000584754 TRIM67Q6ZTA4 783 aa7.9□□□□□ -1.14
PPP4R1-229ENST00000584754 DGAT1O75907 488 aa7.89□□□□□ -1.15
PPP4R1-229ENST00000584754 DXOO77932 396 aaKnown RBP7.89□□□□□ -1.15
PPP4R1-229ENST00000584754 HRCP23327 699 aa7.89□□□□□ -1.15
PPP4R1-229ENST00000584754 MMP16P51512 607 aa7.89□□□□□ -1.15
PPP4R1-229ENST00000584754 MTMR2Q13614 643 aa7.89□□□□□ -1.15
PPP4R1-229ENST00000584754 SPRYD7Q5W111 196 aa7.89□□□□□ -1.15
PPP4R1-229ENST00000584754 FBXO31Q5XUX0 539 aaPredicted RBP7.89□□□□□ -1.15
PPP4R1-229ENST00000584754 ZNF598Q86UK7 904 aaKnown RBP7.89□□□□□ -1.15
PPP4R1-229ENST00000584754 RETREG3Q86VR2 466 aa7.89□□□□□ -1.15
PPP4R1-229ENST00000584754 PROCA1Q8NCQ7 364 aaPredicted RBP7.89□□□□□ -1.15
PPP4R1-229ENST00000584754 PRR7Q8TB68 274 aa7.89□□□□□ -1.15
PPP4R1-229ENST00000584754 FAM187AA6NFU0 413 aa7.88□□□□□ -1.15
PPP4R1-229ENST00000584754 CFAP99D6REC4 459 aa7.88□□□□□ -1.15
PPP4R1-229ENST00000584754 MYT1Q01538 1121 aa7.88□□□□□ -1.15
PPP4R1-229ENST00000584754 DIXDC1Q155Q3 683 aa7.88□□□□□ -1.15
PPP4R1-229ENST00000584754 ZNF697Q5TEC3 545 aa7.88□□□□□ -1.15
PPP4R1-229ENST00000584754 ATP1B4Q9UN42 357 aaPredicted RBP7.88□□□□□ -1.15
PPP4R1-229ENST00000584754 TNFRSF10AO00220 468 aa7.87□□□□□ -1.15
PPP4R1-229ENST00000584754 JUNDP17535 347 aa7.87□□□□□ -1.15
PPP4R1-229ENST00000584754 RTL5Q5HYW3 569 aaPredicted RBP7.87□□□□□ -1.15
PPP4R1-229ENST00000584754 NUTM2BA6NNL0 878 aaPredicted RBP7.86□□□□□ -1.15
PPP4R1-229ENST00000584754 NUTM2EB1AL46 878 aaPredicted RBP7.86□□□□□ -1.15
PPP4R1-229ENST00000584754 CLK2P49760 499 aaKnown RBP7.86□□□□□ -1.15
PPP4R1-229ENST00000584754 NUTM2DQ5VT03 806 aaPredicted RBP7.86□□□□□ -1.15
PPP4R1-229ENST00000584754 PTCRAQ6ISU1 281 aaPredicted RBP7.86□□□□□ -1.15
PPP4R1-229ENST00000584754 NUTM2AQ8IVF1 878 aaPredicted RBP7.86□□□□□ -1.15
PPP4R1-229ENST00000584754 TSC1Q92574 1164 aa7.86□□□□□ -1.15
PPP4R1-229ENST00000584754 ZBTB3Q9H5J0 574 aa7.85□□□□□ -1.15
PPP4R1-229ENST00000584754 POTECB2RU33 542 aa7.84□□□□□ -1.15
PPP4R1-229ENST00000584754 GJA5P36382 358 aa7.84□□□□□ -1.15
PPP4R1-229ENST00000584754 PRR20EP86478 221 aa7.84□□□□□ -1.15
PPP4R1-229ENST00000584754 PRR20CP86479 221 aa7.84□□□□□ -1.15
PPP4R1-229ENST00000584754 PRR20DP86480 221 aa7.84□□□□□ -1.15
PPP4R1-229ENST00000584754 PRR20BP86481 221 aa7.84□□□□□ -1.15
PPP4R1-229ENST00000584754 PRR20AP86496 221 aa7.84□□□□□ -1.15
PPP4R1-229ENST00000584754 FOXC1Q12948 553 aa7.84□□□□□ -1.15
PPP4R1-229ENST00000584754 DDRGK1Q96HY6 314 aa7.84□□□□□ -1.15
PPP4R1-229ENST00000584754 RSPH6AQ9H0K4 717 aa7.84□□□□□ -1.15
PPP4R1-229ENST00000584754 PER1O15534 1290 aaPredicted RBP7.83□□□□□ -1.16
PPP4R1-229ENST00000584754 LILRB3O75022 631 aa7.83□□□□□ -1.16
PPP4R1-229ENST00000584754 NUDT12Q9BQG2 462 aa7.83□□□□□ -1.16
PPP4R1-229ENST00000584754 ZBTB24O43167 697 aaPredicted RBP7.82□□□□□ -1.16
PPP4R1-229ENST00000584754 SKIV2LQ15477 1246 aaKnown RBP7.82□□□□□ -1.16
PPP4R1-229ENST00000584754 SPDYE5A6NIY4 337 aa7.81□□□□□ -1.16
PPP4R1-229ENST00000584754 SH3D19Q5HYK7 790 aa7.81□□□□□ -1.16
PPP4R1-229ENST00000584754 PRPF38BQ5VTL8 546 aaKnown RBP7.81□□□□□ -1.16
PPP4R1-229ENST00000584754 ST8SIA5O15466 376 aa7.8□□□□□ -1.16
PPP4R1-229ENST00000584754 CD2BP2O95400 341 aaKnown RBP7.8□□□□□ -1.16
PPP4R1-229ENST00000584754 RPIAP49247 311 aa7.8□□□□□ -1.16
PPP4R1-229ENST00000584754 TRIM32Q13049 653 aa7.8□□□□□ -1.16
PPP4R1-229ENST00000584754 PKD2L1Q9P0L9 805 aa7.8□□□□□ -1.16
PPP4R1-229ENST00000584754 GDF9O60383 454 aa7.79□□□□□ -1.16
PPP4R1-229ENST00000584754 CCNYL3P0C7X3 344 aa7.79□□□□□ -1.16
PPP4R1-229ENST00000584754 LYPD8Q6UX82 237 aa7.79□□□□□ -1.16
PPP4R1-229ENST00000584754 MAP10Q9P2G4 905 aa7.79□□□□□ -1.16
PPP4R1-229ENST00000584754 CTHP32929 405 aa7.78□□□□□ -1.16
PPP4R1-229ENST00000584754 SKOR1P84550 965 aa7.78□□□□□ -1.16
PPP4R1-229ENST00000584754 CTDSPL2Q05D32 466 aa7.78□□□□□ -1.16
PPP4R1-229ENST00000584754 PTPRNQ16849 979 aa7.78□□□□□ -1.16
PPP4R1-229ENST00000584754 TUSC1Q2TAM9 212 aa7.78□□□□□ -1.16
PPP4R1-229ENST00000584754 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.78□□□□□ -1.16
PPP4R1-229ENST00000584754 EVA1BQ9NVM1 165 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms