RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 XPCQ01831 940 aaPredicted RBP21.74■■□□□ 1.07
CSNK1D-224ENST00000584672 KIF1BO60333 1816 aa21.72■■□□□ 1.07
CSNK1D-224ENST00000584672 CCDC125Q86Z20 511 aa21.72■■□□□ 1.07
CSNK1D-224ENST00000584672 GJD4Q96KN9 370 aaPredicted RBP21.71■■□□□ 1.07
CSNK1D-224ENST00000584672 ESCO1Q5FWF5 840 aa21.7■■□□□ 1.06
CSNK1D-224ENST00000584672 DEFB132Q7Z7B7 95 aa21.7■■□□□ 1.06
CSNK1D-224ENST00000584672 BRWD3Q6RI45 1802 aa21.69■■□□□ 1.06
CSNK1D-224ENST00000584672 PXDNQ92626 1479 aa21.69■■□□□ 1.06
CSNK1D-224ENST00000584672 GLI3P10071 1580 aa21.68■■□□□ 1.06
CSNK1D-224ENST00000584672 BLMP54132 1417 aaPredicted RBP21.67■■□□□ 1.06
CSNK1D-224ENST00000584672 NPHP3Q7Z494 1330 aa21.67■■□□□ 1.06
CSNK1D-224ENST00000584672 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.66■■□□□ 1.06
CSNK1D-224ENST00000584672 RALGAPBQ86X10 1494 aa21.66■■□□□ 1.06
CSNK1D-224ENST00000584672 NUTM2FA1L443 756 aa21.66■■□□□ 1.06
CSNK1D-224ENST00000584672 FOXO3O43524 673 aa21.66■■□□□ 1.06
CSNK1D-224ENST00000584672 HFM1A2PYH4 1435 aa21.63■■□□□ 1.05
CSNK1D-224ENST00000584672 CDC42BPGQ6DT37 1551 aa21.63■■□□□ 1.05
CSNK1D-224ENST00000584672 PLEKHG5O94827 1062 aa21.61■■□□□ 1.05
CSNK1D-224ENST00000584672 SF3B2Q13435 895 aaKnown RBP21.61■■□□□ 1.05
CSNK1D-224ENST00000584672 UNC5CLQ8IV45 518 aa21.61■■□□□ 1.05
CSNK1D-224ENST00000584672 LRP5O75197 1615 aa21.61■■□□□ 1.05
CSNK1D-224ENST00000584672 VGFO15240 615 aaPredicted RBP21.6■■□□□ 1.05
CSNK1D-224ENST00000584672 SLIT2O94813 1529 aa21.6■■□□□ 1.05
CSNK1D-224ENST00000584672 PRAG1Q86YV5 1406 aa21.59■■□□□ 1.05
CSNK1D-224ENST00000584672 PSDA5PKW4 1024 aaPredicted RBP21.58■■□□□ 1.05
CSNK1D-224ENST00000584672 NAIPQ13075 1403 aa21.57■■□□□ 1.04
CSNK1D-224ENST00000584672 PPLO60437 1756 aa21.57■■□□□ 1.04
CSNK1D-224ENST00000584672 SEPT12Q8IYM1 358 aa21.57■■□□□ 1.04
CSNK1D-224ENST00000584672 USP32Q8NFA0 1604 aa21.57■■□□□ 1.04
CSNK1D-224ENST00000584672 PPARGC1BQ86YN6 1023 aaKnown RBP21.55■■□□□ 1.04
CSNK1D-224ENST00000584672 STK26Q9P289 416 aa21.55■■□□□ 1.04
CSNK1D-224ENST00000584672 CCDC9Q9Y3X0 531 aaKnown RBP21.55■■□□□ 1.04
CSNK1D-224ENST00000584672 LRPPRCP42704 1394 aaKnown RBP21.54■■□□□ 1.04
CSNK1D-224ENST00000584672 HAP1P54257 671 aaPredicted RBP21.54■■□□□ 1.04
CSNK1D-224ENST00000584672 WAPLQ7Z5K2 1190 aa21.54■■□□□ 1.04
CSNK1D-224ENST00000584672 PLCH1Q4KWH8 1693 aa21.53■■□□□ 1.04
CSNK1D-224ENST00000584672 SPATA31A3Q5VYP0 1347 aa21.53■■□□□ 1.04
CSNK1D-224ENST00000584672 A0A0G2JS52 829 aa21.51■■□□□ 1.03
CSNK1D-224ENST00000584672 MYT1Q01538 1121 aa21.51■■□□□ 1.03
CSNK1D-224ENST00000584672 CABLES1Q8TDN4 633 aa21.51■■□□□ 1.03
CSNK1D-224ENST00000584672 FMN2Q9NZ56 1722 aa21.5■■□□□ 1.03
CSNK1D-224ENST00000584672 PLEKHH1Q9ULM0 1364 aa21.49■■□□□ 1.03
CSNK1D-224ENST00000584672 KRT27Q7Z3Y8 459 aa21.49■■□□□ 1.03
CSNK1D-224ENST00000584672 KIF1AQ12756 1690 aa21.49■■□□□ 1.03
CSNK1D-224ENST00000584672 RPGRIP1LQ68CZ1 1315 aa21.49■■□□□ 1.03
CSNK1D-224ENST00000584672 HRCP23327 699 aa21.48■■□□□ 1.03
CSNK1D-224ENST00000584672 VPS72Q15906 364 aa21.48■■□□□ 1.03
CSNK1D-224ENST00000584672 KRT28Q7Z3Y7 464 aa21.48■■□□□ 1.03
CSNK1D-224ENST00000584672 CCDC144AA2RUR9 1427 aa21.47■■□□□ 1.03
CSNK1D-224ENST00000584672 ABCA3Q99758 1704 aa21.46■■□□□ 1.03
CSNK1D-224ENST00000584672 NWD2Q9ULI1 1742 aa21.46■■□□□ 1.03
CSNK1D-224ENST00000584672 RGPD8O14715 1765 aaPredicted RBP21.46■■□□□ 1.03
CSNK1D-224ENST00000584672 ADGRF5Q8IZF2 1346 aa21.46■■□□□ 1.03
CSNK1D-224ENST00000584672 BAG6P46379 1132 aa21.45■■□□□ 1.02
CSNK1D-224ENST00000584672 LMOD2Q6P5Q4 547 aa21.45■■□□□ 1.02
CSNK1D-224ENST00000584672 TNS3Q68CZ2 1445 aa21.45■■□□□ 1.02
CSNK1D-224ENST00000584672 TMEM132EQ6IEE7 984 aa21.44■■□□□ 1.02
CSNK1D-224ENST00000584672 KNDC1Q76NI1 1749 aa21.43■■□□□ 1.02
CSNK1D-224ENST00000584672 IFT172Q9UG01 1749 aa21.43■■□□□ 1.02
CSNK1D-224ENST00000584672 TECPR2O15040 1411 aa21.42■■□□□ 1.02
CSNK1D-224ENST00000584672 RRBP1Q9P2E9 1410 aaKnown RBP21.41■■□□□ 1.02
CSNK1D-224ENST00000584672 EN1Q05925 392 aaPredicted RBP21.41■■□□□ 1.02
CSNK1D-224ENST00000584672 FAM182BQ5T319 152 aa21.41■■□□□ 1.02
CSNK1D-224ENST00000584672 ONECUT3O60422 494 aaPredicted RBP21.4■■□□□ 1.02
CSNK1D-224ENST00000584672 R3HDM1Q15032 1099 aaKnown RBP21.4■■□□□ 1.02
CSNK1D-224ENST00000584672 FAM98CQ17RN3 349 aaKnown RBP21.4■■□□□ 1.02
CSNK1D-224ENST00000584672 RGL3Q3MIN7 710 aa21.4■■□□□ 1.02
CSNK1D-224ENST00000584672 SLC4A1APQ9BWU0 796 aaKnown RBP21.39■■□□□ 1.01
CSNK1D-224ENST00000584672 RGPD1P0DJD0 1748 aa21.38■■□□□ 1.01
CSNK1D-224ENST00000584672 NRAPQ86VF7 1730 aa21.38■■□□□ 1.01
CSNK1D-224ENST00000584672 PHF8Q9UPP1 1060 aa21.38■■□□□ 1.01
CSNK1D-224ENST00000584672 ABCC11Q96J66 1382 aa21.36■■□□□ 1.01
CSNK1D-224ENST00000584672 FAM83GA6ND36 823 aa21.36■■□□□ 1.01
CSNK1D-224ENST00000584672 PSME1Q06323 249 aa21.36■■□□□ 1.01
CSNK1D-224ENST00000584672 YTHDC2Q9H6S0 1430 aaKnown RBP21.34■■□□□ 1.01
CSNK1D-224ENST00000584672 TNS1Q9HBL0 1735 aaKnown RBP21.33■■□□□ 1.01
CSNK1D-224ENST00000584672 BTG4Q9NY30 223 aa21.33■■□□□ 1.01
CSNK1D-224ENST00000584672 NRXN1Q9ULB1 1477 aa21.32■■□□□ 1
CSNK1D-224ENST00000584672 SAFB2Q14151 953 aaKnown RBP eCLIP21.32■■□□□ 1
CSNK1D-224ENST00000584672 ARHGEF10O15013 1369 aa21.32■■□□□ 1
CSNK1D-224ENST00000584672 PMFBP1Q8TBY8 1022 aa21.31■■□□□ 1
CSNK1D-224ENST00000584672 SBNO1A3KN83 1393 aa21.31■■□□□ 1
CSNK1D-224ENST00000584672 EZH2Q15910 746 aaKnown RBP21.3■■□□□ 1
CSNK1D-224ENST00000584672 PIK3C2GO75747 1445 aa21.29■■□□□ 1
CSNK1D-224ENST00000584672 COL14A1Q05707 1796 aaKnown RBP21.28■■□□□ 1
CSNK1D-224ENST00000584672 SPATA31E1Q6ZUB1 1445 aa21.28■■□□□ 1
CSNK1D-224ENST00000584672 ANKRD30BQ9BXX2 1392 aa21.27■■□□□ 1
CSNK1D-224ENST00000584672 THSD7AQ9UPZ6 1657 aa21.26■□□□□ 0.99
CSNK1D-224ENST00000584672 TRPM3Q9HCF6 1732 aaPredicted RBP21.26■□□□□ 0.99
CSNK1D-224ENST00000584672 YY1P25490 414 aa21.24■□□□□ 0.99
CSNK1D-224ENST00000584672 PRAM1Q96QH2 718 aa21.24■□□□□ 0.99
CSNK1D-224ENST00000584672 ADGRB2O60241 1585 aa21.23■□□□□ 0.99
CSNK1D-224ENST00000584672 DISP2A7MBM2 1401 aa21.23■□□□□ 0.99
CSNK1D-224ENST00000584672 ALS2Q96Q42 1657 aa21.23■□□□□ 0.99
CSNK1D-224ENST00000584672 SPATA31A5Q5VU36 1347 aa21.23■□□□□ 0.99
CSNK1D-224ENST00000584672 SPATA31A7Q8IWB4 1347 aa21.23■□□□□ 0.99
CSNK1D-224ENST00000584672 TRIM37O94972 964 aa21.22■□□□□ 0.99
CSNK1D-224ENST00000584672 CFAP70Q5T0N1 1121 aa21.2■□□□□ 0.98
CSNK1D-224ENST00000584672 CRYBG1Q9Y4K1 1723 aa21.19■□□□□ 0.98
CSNK1D-224ENST00000584672 SIRT1Q96EB6 747 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms