RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 NEXMIFQ5QGS0 1516 aa15.61■□□□□ 0.09
GGA3-219ENST00000584550 ROCK1Q13464 1354 aa15.6■□□□□ 0.09
GGA3-219ENST00000584550 MARF1Q9Y4F3 1742 aaKnown RBP15.6■□□□□ 0.09
GGA3-219ENST00000584550 MYOM2P54296 1465 aa15.59■□□□□ 0.09
GGA3-219ENST00000584550 FOXO3O43524 673 aa15.59■□□□□ 0.09
GGA3-219ENST00000584550 BLMP54132 1417 aaPredicted RBP15.59■□□□□ 0.09
GGA3-219ENST00000584550 CLTCL1P53675 1640 aa15.58■□□□□ 0.09
GGA3-219ENST00000584550 NUTM2FA1L443 756 aa15.58■□□□□ 0.08
GGA3-219ENST00000584550 SF3B2Q13435 895 aaKnown RBP15.57■□□□□ 0.08
GGA3-219ENST00000584550 NPHP3Q7Z494 1330 aa15.57■□□□□ 0.08
GGA3-219ENST00000584550 BRWD3Q6RI45 1802 aa15.57■□□□□ 0.08
GGA3-219ENST00000584550 PSDA5PKW4 1024 aaPredicted RBP15.56■□□□□ 0.08
GGA3-219ENST00000584550 PLEKHG5O94827 1062 aa15.56■□□□□ 0.08
GGA3-219ENST00000584550 UNC5CLQ8IV45 518 aa15.56■□□□□ 0.08
GGA3-219ENST00000584550 RALGAPBQ86X10 1494 aa15.56■□□□□ 0.08
GGA3-219ENST00000584550 GLI3P10071 1580 aa15.55■□□□□ 0.08
GGA3-219ENST00000584550 PXDNQ92626 1479 aa15.55■□□□□ 0.08
GGA3-219ENST00000584550 KIF1BO60333 1816 aa15.54■□□□□ 0.08
GGA3-219ENST00000584550 VGFO15240 615 aaPredicted RBP15.54■□□□□ 0.08
GGA3-219ENST00000584550 SEPT12Q8IYM1 358 aa15.54■□□□□ 0.08
GGA3-219ENST00000584550 CCDC9Q9Y3X0 531 aaKnown RBP15.52■□□□□ 0.08
GGA3-219ENST00000584550 HFM1A2PYH4 1435 aa15.51■□□□□ 0.07
GGA3-219ENST00000584550 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.51■□□□□ 0.07
GGA3-219ENST00000584550 LRP5O75197 1615 aa15.5■□□□□ 0.07
GGA3-219ENST00000584550 SLIT2O94813 1529 aa15.5■□□□□ 0.07
GGA3-219ENST00000584550 WAPLQ7Z5K2 1190 aa15.5■□□□□ 0.07
GGA3-219ENST00000584550 STK26Q9P289 416 aa15.5■□□□□ 0.07
GGA3-219ENST00000584550 LRPPRCP42704 1394 aaKnown RBP15.49■□□□□ 0.07
GGA3-219ENST00000584550 HAP1P54257 671 aaPredicted RBP15.49■□□□□ 0.07
GGA3-219ENST00000584550 PPARGC1BQ86YN6 1023 aaKnown RBP15.49■□□□□ 0.07
GGA3-219ENST00000584550 CABLES1Q8TDN4 633 aa15.49■□□□□ 0.07
GGA3-219ENST00000584550 A0A0G2JS52 829 aa15.48■□□□□ 0.07
GGA3-219ENST00000584550 HRCP23327 699 aa15.48■□□□□ 0.07
GGA3-219ENST00000584550 MYT1Q01538 1121 aa15.48■□□□□ 0.07
GGA3-219ENST00000584550 KRT27Q7Z3Y8 459 aa15.48■□□□□ 0.07
GGA3-219ENST00000584550 SPATA31A3Q5VYP0 1347 aa15.47■□□□□ 0.07
GGA3-219ENST00000584550 NAIPQ13075 1403 aa15.47■□□□□ 0.07
GGA3-219ENST00000584550 CDC42BPGQ6DT37 1551 aa15.47■□□□□ 0.07
GGA3-219ENST00000584550 VPS72Q15906 364 aa15.46■□□□□ 0.07
GGA3-219ENST00000584550 KRT28Q7Z3Y7 464 aa15.46■□□□□ 0.07
GGA3-219ENST00000584550 BAG6P46379 1132 aa15.45■□□□□ 0.06
GGA3-219ENST00000584550 USP32Q8NFA0 1604 aa15.45■□□□□ 0.06
GGA3-219ENST00000584550 PRAG1Q86YV5 1406 aa15.44■□□□□ 0.06
GGA3-219ENST00000584550 LMOD2Q6P5Q4 547 aa15.44■□□□□ 0.06
GGA3-219ENST00000584550 RPGRIP1LQ68CZ1 1315 aa15.43■□□□□ 0.06
GGA3-219ENST00000584550 ONECUT3O60422 494 aaPredicted RBP15.43■□□□□ 0.06
GGA3-219ENST00000584550 EN1Q05925 392 aaPredicted RBP15.43■□□□□ 0.06
GGA3-219ENST00000584550 FAM182BQ5T319 152 aa15.43■□□□□ 0.06
GGA3-219ENST00000584550 PLEKHH1Q9ULM0 1364 aa15.43■□□□□ 0.06
GGA3-219ENST00000584550 PPLO60437 1756 aa15.43■□□□□ 0.06
GGA3-219ENST00000584550 R3HDM1Q15032 1099 aaKnown RBP15.42■□□□□ 0.06
GGA3-219ENST00000584550 TMEM132EQ6IEE7 984 aa15.42■□□□□ 0.06
GGA3-219ENST00000584550 PLCH1Q4KWH8 1693 aa15.41■□□□□ 0.06
GGA3-219ENST00000584550 FAM98CQ17RN3 349 aaKnown RBP15.41■□□□□ 0.06
GGA3-219ENST00000584550 ADGRF5Q8IZF2 1346 aa15.41■□□□□ 0.06
GGA3-219ENST00000584550 FAM83GA6ND36 823 aa15.4■□□□□ 0.06
GGA3-219ENST00000584550 CCDC144AA2RUR9 1427 aa15.4■□□□□ 0.06
GGA3-219ENST00000584550 RGPD8O14715 1765 aaPredicted RBP15.39■□□□□ 0.05
GGA3-219ENST00000584550 RGL3Q3MIN7 710 aa15.39■□□□□ 0.05
GGA3-219ENST00000584550 FMN2Q9NZ56 1722 aa15.38■□□□□ 0.05
GGA3-219ENST00000584550 PSME1Q06323 249 aa15.38■□□□□ 0.05
GGA3-219ENST00000584550 PHF8Q9UPP1 1060 aa15.38■□□□□ 0.05
GGA3-219ENST00000584550 KIF1AQ12756 1690 aa15.38■□□□□ 0.05
GGA3-219ENST00000584550 NWD2Q9ULI1 1742 aa15.37■□□□□ 0.05
GGA3-219ENST00000584550 TNS3Q68CZ2 1445 aa15.37■□□□□ 0.05
GGA3-219ENST00000584550 SLC4A1APQ9BWU0 796 aaKnown RBP15.36■□□□□ 0.05
GGA3-219ENST00000584550 BTG4Q9NY30 223 aa15.36■□□□□ 0.05
GGA3-219ENST00000584550 EZH2Q15910 746 aaKnown RBP15.34■□□□□ 0.05
GGA3-219ENST00000584550 ABCC11Q96J66 1382 aa15.34■□□□□ 0.05
GGA3-219ENST00000584550 ABCA3Q99758 1704 aa15.34■□□□□ 0.05
GGA3-219ENST00000584550 TECPR2O15040 1411 aa15.34■□□□□ 0.05
GGA3-219ENST00000584550 RRBP1Q9P2E9 1410 aaKnown RBP15.34■□□□□ 0.05
GGA3-219ENST00000584550 YY1P25490 414 aa15.33■□□□□ 0.04
GGA3-219ENST00000584550 SAFB2Q14151 953 aaKnown RBP eCLIP15.33■□□□□ 0.04
GGA3-219ENST00000584550 PMFBP1Q8TBY8 1022 aa15.33■□□□□ 0.04
GGA3-219ENST00000584550 RGPD1P0DJD0 1748 aa15.33■□□□□ 0.04
GGA3-219ENST00000584550 IFT172Q9UG01 1749 aa15.32■□□□□ 0.04
GGA3-219ENST00000584550 SBNO1A3KN83 1393 aa15.31■□□□□ 0.04
GGA3-219ENST00000584550 ARHGEF10O15013 1369 aa15.31■□□□□ 0.04
GGA3-219ENST00000584550 KNDC1Q76NI1 1749 aa15.31■□□□□ 0.04
GGA3-219ENST00000584550 NRAPQ86VF7 1730 aa15.31■□□□□ 0.04
GGA3-219ENST00000584550 YTHDC2Q9H6S0 1430 aaKnown RBP15.3■□□□□ 0.04
GGA3-219ENST00000584550 NRXN1Q9ULB1 1477 aa15.29■□□□□ 0.04
GGA3-219ENST00000584550 TRIM37O94972 964 aa15.29■□□□□ 0.04
GGA3-219ENST00000584550 TNS1Q9HBL0 1735 aaKnown RBP15.28■□□□□ 0.04
GGA3-219ENST00000584550 SPATA31A5Q5VU36 1347 aa15.27■□□□□ 0.04
GGA3-219ENST00000584550 SPATA31A7Q8IWB4 1347 aa15.27■□□□□ 0.04
GGA3-219ENST00000584550 CAMKK2Q96RR4 588 aa15.27■□□□□ 0.04
GGA3-219ENST00000584550 ANKRD30BQ9BXX2 1392 aa15.26■□□□□ 0.03
GGA3-219ENST00000584550 APBA3O96018 575 aa15.26■□□□□ 0.03
GGA3-219ENST00000584550 PRAM1Q96QH2 718 aa15.26■□□□□ 0.03
GGA3-219ENST00000584550 COL14A1Q05707 1796 aaKnown RBP15.26■□□□□ 0.03
GGA3-219ENST00000584550 PIK3C2GO75747 1445 aa15.26■□□□□ 0.03
GGA3-219ENST00000584550 DISP2A7MBM2 1401 aa15.25■□□□□ 0.03
GGA3-219ENST00000584550 CFAP70Q5T0N1 1121 aa15.24■□□□□ 0.03
GGA3-219ENST00000584550 SIRT1Q96EB6 747 aa15.24■□□□□ 0.03
GGA3-219ENST00000584550 SPATA31E1Q6ZUB1 1445 aa15.24■□□□□ 0.03
GGA3-219ENST00000584550 PAK3O75914 559 aaPredicted RBP15.23■□□□□ 0.03
GGA3-219ENST00000584550 FAM196AQ6ZSG2 479 aa15.23■□□□□ 0.03
GGA3-219ENST00000584550 HIRIP3Q9BW71 556 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms