RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 ATAD2Q6PL18 1390 aa19.55■□□□□ 0.72
CDK5RAP3-234ENST00000584525 FOXO3O43524 673 aa19.54■□□□□ 0.72
CDK5RAP3-234ENST00000584525 XPCQ01831 940 aaPredicted RBP19.54■□□□□ 0.72
CDK5RAP3-234ENST00000584525 PRAG1Q86YV5 1406 aa19.53■□□□□ 0.72
CDK5RAP3-234ENST00000584525 RGL3Q3MIN7 710 aa19.53■□□□□ 0.72
CDK5RAP3-234ENST00000584525 ADGRF5Q8IZF2 1346 aa19.52■□□□□ 0.72
CDK5RAP3-234ENST00000584525 NUTM2FA1L443 756 aa19.52■□□□□ 0.72
CDK5RAP3-234ENST00000584525 WAPLQ7Z5K2 1190 aa19.52■□□□□ 0.72
CDK5RAP3-234ENST00000584525 KIF1BO60333 1816 aa19.52■□□□□ 0.72
CDK5RAP3-234ENST00000584525 LAMC1P11047 1609 aa19.5■□□□□ 0.71
CDK5RAP3-234ENST00000584525 ATRNO75882 1429 aa19.5■□□□□ 0.71
CDK5RAP3-234ENST00000584525 LRPPRCP42704 1394 aaKnown RBP19.49■□□□□ 0.71
CDK5RAP3-234ENST00000584525 TMEM132EQ6IEE7 984 aa19.48■□□□□ 0.71
CDK5RAP3-234ENST00000584525 CCDC144AA2RUR9 1427 aa19.47■□□□□ 0.71
CDK5RAP3-234ENST00000584525 MYOM2P54296 1465 aa19.47■□□□□ 0.71
CDK5RAP3-234ENST00000584525 GJD4Q96KN9 370 aaPredicted RBP19.45■□□□□ 0.7
CDK5RAP3-234ENST00000584525 ZRANB1Q9UGI0 708 aa19.45■□□□□ 0.7
CDK5RAP3-234ENST00000584525 BCL9LQ86UU0 1499 aa19.45■□□□□ 0.7
CDK5RAP3-234ENST00000584525 PXDNQ92626 1479 aa19.45■□□□□ 0.7
CDK5RAP3-234ENST00000584525 SRCAPQ6ZRS2 3230 aa19.45■□□□□ 0.7
CDK5RAP3-234ENST00000584525 ANKRD30BQ9BXX2 1392 aa19.44■□□□□ 0.7
CDK5RAP3-234ENST00000584525 CDC42BPGQ6DT37 1551 aa19.44■□□□□ 0.7
CDK5RAP3-234ENST00000584525 ABCC11Q96J66 1382 aa19.44■□□□□ 0.7
CDK5RAP3-234ENST00000584525 PLEKHH1Q9ULM0 1364 aa19.44■□□□□ 0.7
CDK5RAP3-234ENST00000584525 MPHOSPH9Q99550 1183 aa19.43■□□□□ 0.7
CDK5RAP3-234ENST00000584525 CCDC125Q86Z20 511 aa19.42■□□□□ 0.7
CDK5RAP3-234ENST00000584525 COL22A1Q8NFW1 1626 aaPredicted RBP19.42■□□□□ 0.7
CDK5RAP3-234ENST00000584525 KRT28Q7Z3Y7 464 aa19.41■□□□□ 0.7
CDK5RAP3-234ENST00000584525 UNC5CLQ8IV45 518 aa19.41■□□□□ 0.7
CDK5RAP3-234ENST00000584525 TECPR2O15040 1411 aa19.41■□□□□ 0.7
CDK5RAP3-234ENST00000584525 SPATA31E1Q6ZUB1 1445 aa19.41■□□□□ 0.7
CDK5RAP3-234ENST00000584525 PPLO60437 1756 aa19.4■□□□□ 0.7
CDK5RAP3-234ENST00000584525 SPATA31A3Q5VYP0 1347 aa19.4■□□□□ 0.7
CDK5RAP3-234ENST00000584525 HAP1P54257 671 aaPredicted RBP19.39■□□□□ 0.69
CDK5RAP3-234ENST00000584525 PLEKHG5O94827 1062 aa19.38■□□□□ 0.69
CDK5RAP3-234ENST00000584525 PIK3C2GO75747 1445 aa19.36■□□□□ 0.69
CDK5RAP3-234ENST00000584525 YTHDC2Q9H6S0 1430 aaKnown RBP19.36■□□□□ 0.69
CDK5RAP3-234ENST00000584525 PSME1Q06323 249 aa19.36■□□□□ 0.69
CDK5RAP3-234ENST00000584525 SIRT1Q96EB6 747 aa19.36■□□□□ 0.69
CDK5RAP3-234ENST00000584525 PHF8Q9UPP1 1060 aa19.36■□□□□ 0.69
CDK5RAP3-234ENST00000584525 LMOD2Q6P5Q4 547 aa19.35■□□□□ 0.69
CDK5RAP3-234ENST00000584525 C14orf93Q9H972 538 aaKnown RBP19.35■□□□□ 0.69
CDK5RAP3-234ENST00000584525 SAFB2Q14151 953 aaKnown RBP eCLIP19.34■□□□□ 0.69
CDK5RAP3-234ENST00000584525 CFAP70Q5T0N1 1121 aa19.34■□□□□ 0.69
CDK5RAP3-234ENST00000584525 CABLES1Q8TDN4 633 aa19.34■□□□□ 0.69
CDK5RAP3-234ENST00000584525 RALGAPBQ86X10 1494 aa19.34■□□□□ 0.69
CDK5RAP3-234ENST00000584525 ACIN1Q9UKV3 1341 aaKnown RBP19.32■□□□□ 0.68
CDK5RAP3-234ENST00000584525 SLIT2O94813 1529 aa19.32■□□□□ 0.68
CDK5RAP3-234ENST00000584525 SEPT12Q8IYM1 358 aa19.32■□□□□ 0.68
CDK5RAP3-234ENST00000584525 CCDC9Q9Y3X0 531 aaKnown RBP19.32■□□□□ 0.68
CDK5RAP3-234ENST00000584525 DHX57Q6P158 1386 aaKnown RBP19.32■□□□□ 0.68
CDK5RAP3-234ENST00000584525 PRAM1Q96QH2 718 aa19.31■□□□□ 0.68
CDK5RAP3-234ENST00000584525 EP400Q96L91 3159 aa19.31■□□□□ 0.68
CDK5RAP3-234ENST00000584525 SF3B2Q13435 895 aaKnown RBP19.3■□□□□ 0.68
CDK5RAP3-234ENST00000584525 VPS72Q15906 364 aa19.3■□□□□ 0.68
CDK5RAP3-234ENST00000584525 POGKQ9P215 609 aa19.3■□□□□ 0.68
CDK5RAP3-234ENST00000584525 BLMP54132 1417 aaPredicted RBP19.29■□□□□ 0.68
CDK5RAP3-234ENST00000584525 TNS3Q68CZ2 1445 aa19.29■□□□□ 0.68
CDK5RAP3-234ENST00000584525 DEFB132Q7Z7B7 95 aa19.28■□□□□ 0.68
CDK5RAP3-234ENST00000584525 PMFBP1Q8TBY8 1022 aa19.27■□□□□ 0.68
CDK5RAP3-234ENST00000584525 SBNO1A3KN83 1393 aa19.27■□□□□ 0.68
CDK5RAP3-234ENST00000584525 ARHGEF10O15013 1369 aa19.26■□□□□ 0.67
CDK5RAP3-234ENST00000584525 KIF1AQ12756 1690 aa19.25■□□□□ 0.67
CDK5RAP3-234ENST00000584525 GLI3P10071 1580 aa19.25■□□□□ 0.67
CDK5RAP3-234ENST00000584525 A0A0G2JS52 829 aa19.25■□□□□ 0.67
CDK5RAP3-234ENST00000584525 FAM83GA6ND36 823 aa19.25■□□□□ 0.67
CDK5RAP3-234ENST00000584525 MYT1Q01538 1121 aa19.25■□□□□ 0.67
CDK5RAP3-234ENST00000584525 FMN2Q9NZ56 1722 aa19.25■□□□□ 0.67
CDK5RAP3-234ENST00000584525 ONECUT3O60422 494 aaPredicted RBP19.24■□□□□ 0.67
CDK5RAP3-234ENST00000584525 KRT27Q7Z3Y8 459 aa19.24■□□□□ 0.67
CDK5RAP3-234ENST00000584525 KNDC1Q76NI1 1749 aa19.24■□□□□ 0.67
CDK5RAP3-234ENST00000584525 NRXN1Q9ULB1 1477 aa19.23■□□□□ 0.67
CDK5RAP3-234ENST00000584525 MARF1Q9Y4F3 1742 aaKnown RBP19.23■□□□□ 0.67
CDK5RAP3-234ENST00000584525 USP32Q8NFA0 1604 aa19.23■□□□□ 0.67
CDK5RAP3-234ENST00000584525 HIRIP3Q9BW71 556 aaPredicted RBP19.22■□□□□ 0.67
CDK5RAP3-234ENST00000584525 TRAK1Q9UPV9 953 aa19.22■□□□□ 0.67
CDK5RAP3-234ENST00000584525 IFT172Q9UG01 1749 aa19.22■□□□□ 0.67
CDK5RAP3-234ENST00000584525 RAB3GAP2Q9H2M9 1393 aa19.21■□□□□ 0.67
CDK5RAP3-234ENST00000584525 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.21■□□□□ 0.67
CDK5RAP3-234ENST00000584525 BTG4Q9NY30 223 aa19.2■□□□□ 0.66
CDK5RAP3-234ENST00000584525 ANKARQ7Z5J8 1434 aa19.19■□□□□ 0.66
CDK5RAP3-234ENST00000584525 FAM98CQ17RN3 349 aaKnown RBP19.19■□□□□ 0.66
CDK5RAP3-234ENST00000584525 MINK1Q8N4C8 1332 aaPredicted RBP19.19■□□□□ 0.66
CDK5RAP3-234ENST00000584525 GPRASP1Q5JY77 1395 aa19.19■□□□□ 0.66
CDK5RAP3-234ENST00000584525 KDM2AQ9Y2K7 1162 aa19.18■□□□□ 0.66
CDK5RAP3-234ENST00000584525 NGDNQ8NEJ9 315 aaKnown RBP19.16■□□□□ 0.66
CDK5RAP3-234ENST00000584525 PAK3O75914 559 aaPredicted RBP19.15■□□□□ 0.66
CDK5RAP3-234ENST00000584525 BAG6P46379 1132 aa19.15■□□□□ 0.66
CDK5RAP3-234ENST00000584525 DLC1Q96QB1 1528 aa19.15■□□□□ 0.66
CDK5RAP3-234ENST00000584525 WASLO00401 505 aaPredicted RBP19.14■□□□□ 0.65
CDK5RAP3-234ENST00000584525 DCAF11Q8TEB1 546 aa19.14■□□□□ 0.65
CDK5RAP3-234ENST00000584525 PRR36Q9H6K5 1346 aa19.14■□□□□ 0.65
CDK5RAP3-234ENST00000584525 EIF3AQ14152 1382 aaKnown RBP19.14■□□□□ 0.65
CDK5RAP3-234ENST00000584525 PSDA5PKW4 1024 aaPredicted RBP19.12■□□□□ 0.65
CDK5RAP3-234ENST00000584525 FAM182BQ5T319 152 aa19.11■□□□□ 0.65
CDK5RAP3-234ENST00000584525 SPATA31A5Q5VU36 1347 aa19.1■□□□□ 0.65
CDK5RAP3-234ENST00000584525 SPATA31A7Q8IWB4 1347 aa19.1■□□□□ 0.65
CDK5RAP3-234ENST00000584525 PRDM11Q9NQV5 511 aa19.1■□□□□ 0.65
CDK5RAP3-234ENST00000584525 RGPD8O14715 1765 aaPredicted RBP19.1■□□□□ 0.65
CDK5RAP3-234ENST00000584525 NWD2Q9ULI1 1742 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms