RNA–Protein interactions for RNA: ENST00000584243.5

GGA3-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-218ENST00000584243 STAG3Q9UJ98 1225 aa12.29□□□□□ -0.44
GGA3-218ENST00000584243 VPS72Q15906 364 aa12.28□□□□□ -0.44
GGA3-218ENST00000584243 FHDC1Q9C0D6 1143 aaPredicted RBP12.28□□□□□ -0.44
GGA3-218ENST00000584243 PDGFDQ9GZP0 370 aaPredicted RBP12.28□□□□□ -0.44
GGA3-218ENST00000584243 PARD3Q8TEW0 1356 aa12.28□□□□□ -0.44
GGA3-218ENST00000584243 FAM83GA6ND36 823 aa12.27□□□□□ -0.45
GGA3-218ENST00000584243 C1orf167Q5SNV9 1468 aa12.27□□□□□ -0.45
GGA3-218ENST00000584243 ADGRB2O60241 1585 aa12.26□□□□□ -0.45
GGA3-218ENST00000584243 TMEM131LA2VDJ0 1609 aa12.26□□□□□ -0.45
GGA3-218ENST00000584243 CEP162Q5TB80 1403 aa12.25□□□□□ -0.45
GGA3-218ENST00000584243 ADGRL3Q9HAR2 1447 aa12.25□□□□□ -0.45
GGA3-218ENST00000584243 DLC1Q96QB1 1528 aa12.23□□□□□ -0.45
GGA3-218ENST00000584243 NOS1P29475 1434 aa12.23□□□□□ -0.45
GGA3-218ENST00000584243 TNS2Q63HR2 1409 aa12.23□□□□□ -0.45
GGA3-218ENST00000584243 PIK3R4Q99570 1358 aa12.23□□□□□ -0.45
GGA3-218ENST00000584243 ORAI2Q96SN7 254 aa12.23□□□□□ -0.45
GGA3-218ENST00000584243 AMOTL2Q9Y2J4 779 aa12.23□□□□□ -0.45
GGA3-218ENST00000584243 NBPF8Q3BBV2 869 aa12.22□□□□□ -0.45
GGA3-218ENST00000584243 NBPF14Q5TI25 921 aa12.22□□□□□ -0.45
GGA3-218ENST00000584243 ATP10DQ9P241 1426 aa12.21□□□□□ -0.45
GGA3-218ENST00000584243 MTUS2Q5JR59 1369 aa12.21□□□□□ -0.45
GGA3-218ENST00000584243 XRN1Q8IZH2 1706 aaKnown RBP12.21□□□□□ -0.45
GGA3-218ENST00000584243 TRIM37O94972 964 aa12.21□□□□□ -0.45
GGA3-218ENST00000584243 EHBP1L1Q8N3D4 1523 aa12.21□□□□□ -0.46
GGA3-218ENST00000584243 CCDC141Q6ZP82 1450 aa12.21□□□□□ -0.46
GGA3-218ENST00000584243 ZBTB7AO95365 584 aa12.2□□□□□ -0.46
GGA3-218ENST00000584243 APBA3O96018 575 aa12.2□□□□□ -0.46
GGA3-218ENST00000584243 FAM98CQ17RN3 349 aaKnown RBP12.2□□□□□ -0.46
GGA3-218ENST00000584243 WWC3Q9ULE0 1092 aa12.2□□□□□ -0.46
GGA3-218ENST00000584243 CCDC18Q5T9S5 1454 aa12.2□□□□□ -0.46
GGA3-218ENST00000584243 PXDNQ92626 1479 aa12.2□□□□□ -0.46
GGA3-218ENST00000584243 NALCNQ8IZF0 1738 aa12.2□□□□□ -0.46
GGA3-218ENST00000584243 CCNB3Q8WWL7 1395 aa12.19□□□□□ -0.46
GGA3-218ENST00000584243 EIF2AK4Q9P2K8 1649 aaKnown RBP12.19□□□□□ -0.46
GGA3-218ENST00000584243 PLCH1Q4KWH8 1693 aa12.19□□□□□ -0.46
GGA3-218ENST00000584243 RIMS2Q9UQ26 1411 aa12.19□□□□□ -0.46
GGA3-218ENST00000584243 USP32Q8NFA0 1604 aa12.19□□□□□ -0.46
GGA3-218ENST00000584243 JMYQ8N9B5 988 aa12.18□□□□□ -0.46
GGA3-218ENST00000584243 SGIP1Q9BQI5 828 aa12.18□□□□□ -0.46
GGA3-218ENST00000584243 A0A0G2JS52 829 aa12.17□□□□□ -0.46
GGA3-218ENST00000584243 APLP1P51693 650 aa12.17□□□□□ -0.46
GGA3-218ENST00000584243 MYT1Q01538 1121 aa12.17□□□□□ -0.46
GGA3-218ENST00000584243 ANO8Q9HCE9 1232 aaPredicted RBP12.17□□□□□ -0.46
GGA3-218ENST00000584243 PTPN23Q9H3S7 1636 aa12.17□□□□□ -0.46
GGA3-218ENST00000584243 CCDC9Q9Y3X0 531 aaKnown RBP12.16□□□□□ -0.46
GGA3-218ENST00000584243 NWD2Q9ULI1 1742 aa12.16□□□□□ -0.46
GGA3-218ENST00000584243 THSD7AQ9UPZ6 1657 aa12.16□□□□□ -0.46
GGA3-218ENST00000584243 MYO5BQ9ULV0 1848 aa12.16□□□□□ -0.46
GGA3-218ENST00000584243 ATF5Q9Y2D1 282 aaPredicted RBP12.15□□□□□ -0.46
GGA3-218ENST00000584243 CROCC2H7BZ55 1655 aa12.15□□□□□ -0.46
GGA3-218ENST00000584243 RPRD2Q5VT52 1461 aaKnown RBP12.14□□□□□ -0.47
GGA3-218ENST00000584243 GPR162Q16538 588 aa12.14□□□□□ -0.47
GGA3-218ENST00000584243 MAP3K5Q99683 1374 aa12.14□□□□□ -0.47
GGA3-218ENST00000584243 CASKIN1Q8WXD9 1431 aa12.13□□□□□ -0.47
GGA3-218ENST00000584243 FAM161AQ3B820 660 aa12.13□□□□□ -0.47
GGA3-218ENST00000584243 UBTFP17480 764 aaKnown RBP12.12□□□□□ -0.47
GGA3-218ENST00000584243 GPBP1L1Q9HC44 474 aaPredicted RBP12.12□□□□□ -0.47
GGA3-218ENST00000584243 ADGRL2O95490 1459 aa12.12□□□□□ -0.47
GGA3-218ENST00000584243 NRAPQ86VF7 1730 aa12.11□□□□□ -0.47
GGA3-218ENST00000584243 XPCQ01831 940 aaPredicted RBP12.11□□□□□ -0.47
GGA3-218ENST00000584243 ADCY9O60503 1353 aa12.1□□□□□ -0.47
GGA3-218ENST00000584243 KLRG1Q96E93 195 aa12.1□□□□□ -0.47
GGA3-218ENST00000584243 KIF3CO14782 793 aa12.09□□□□□ -0.47
GGA3-218ENST00000584243 HTRA3P83110 453 aa12.09□□□□□ -0.47
GGA3-218ENST00000584243 NEXMIFQ5QGS0 1516 aa12.09□□□□□ -0.47
GGA3-218ENST00000584243 VPS8Q8N3P4 1428 aa12.09□□□□□ -0.47
GGA3-218ENST00000584243 WDR90Q96KV7 1748 aa12.08□□□□□ -0.47
GGA3-218ENST00000584243 FAM196AQ6ZSG2 479 aa12.08□□□□□ -0.48
GGA3-218ENST00000584243 NRXN3Q9Y4C0 1643 aa12.08□□□□□ -0.48
GGA3-218ENST00000584243 AATKQ6ZMQ8 1374 aa12.07□□□□□ -0.48
GGA3-218ENST00000584243 GCC2Q8IWJ2 1684 aa12.07□□□□□ -0.48
GGA3-218ENST00000584243 ABCC5O15440 1437 aa12.07□□□□□ -0.48
GGA3-218ENST00000584243 ZNF526Q8TF50 670 aaPredicted RBP12.06□□□□□ -0.48
GGA3-218ENST00000584243 NPHP3Q7Z494 1330 aa12.05□□□□□ -0.48
GGA3-218ENST00000584243 ARHGEF5Q12774 1597 aa12.05□□□□□ -0.48
GGA3-218ENST00000584243 YBX3P16989 372 aaKnown RBP eCLIP12.04□□□□□ -0.48
GGA3-218ENST00000584243 APLP2Q06481 763 aa12.04□□□□□ -0.48
GGA3-218ENST00000584243 ARXQ96QS3 562 aa12.04□□□□□ -0.48
GGA3-218ENST00000584243 SLC52A1Q9NWF4 448 aa12.04□□□□□ -0.48
GGA3-218ENST00000584243 METP08581 1390 aa12.04□□□□□ -0.48
GGA3-218ENST00000584243 LMTK2Q8IWU2 1503 aa12.03□□□□□ -0.48
GGA3-218ENST00000584243 CABLES1Q8TDN4 633 aa12.03□□□□□ -0.48
GGA3-218ENST00000584243 FOXO3O43524 673 aa12.02□□□□□ -0.49
GGA3-218ENST00000584243 RSPH4AQ5TD94 716 aa12.02□□□□□ -0.49
GGA3-218ENST00000584243 SPATA31A5Q5VU36 1347 aa12.02□□□□□ -0.49
GGA3-218ENST00000584243 SPATA31A3Q5VYP0 1347 aa12.02□□□□□ -0.49
GGA3-218ENST00000584243 SPATA31A7Q8IWB4 1347 aa12.02□□□□□ -0.49
GGA3-218ENST00000584243 ABCA3Q99758 1704 aa12.01□□□□□ -0.49
GGA3-218ENST00000584243 PELP1Q8IZL8 1130 aaKnown RBP12.01□□□□□ -0.49
GGA3-218ENST00000584243 MTFR1LQ9H019 292 aa12.01□□□□□ -0.49
GGA3-218ENST00000584243 FYCO1Q9BQS8 1478 aa12.01□□□□□ -0.49
GGA3-218ENST00000584243 HDGFP51858 240 aaKnown RBP12□□□□□ -0.49
GGA3-218ENST00000584243 ABCF1Q8NE71 845 aaKnown RBP eCLIP12□□□□□ -0.49
GGA3-218ENST00000584243 RGPD3A6NKT7 1758 aaPredicted RBP12□□□□□ -0.49
GGA3-218ENST00000584243 RGPD4Q7Z3J3 1758 aa12□□□□□ -0.49
GGA3-218ENST00000584243 HSPA1AP0DMV8 641 aaKnown RBP11.99□□□□□ -0.49
GGA3-218ENST00000584243 HSPA1BP0DMV9 641 aaKnown RBP11.99□□□□□ -0.49
GGA3-218ENST00000584243 KIAA1210Q9ULL0 1709 aa11.98□□□□□ -0.49
GGA3-218ENST00000584243 PROM2Q8N271 834 aa11.98□□□□□ -0.49
GGA3-218ENST00000584243 NLGN2Q8NFZ4 835 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms