RNA–Protein interactions for RNA: ENST00000584054.5

EIF4A1-231, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 2

Gene EIF4A1, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-231	ENST00000584054	TRAK1	Q9UPV9	953 aa		14.15	□□□□□ -0.14
EIF4A1-231	ENST00000584054	IQSEC2	Q5JU85	1478 aa		14.14	□□□□□ -0.15
EIF4A1-231	ENST00000584054	USP47	Q96K76	1375 aa		14.14	□□□□□ -0.15
EIF4A1-231	ENST00000584054	WAPL	Q7Z5K2	1190 aa		14.14	□□□□□ -0.15
EIF4A1-231	ENST00000584054	STK26	Q9P289	416 aa		14.14	□□□□□ -0.15
EIF4A1-231	ENST00000584054	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	14.14	□□□□□ -0.15
EIF4A1-231	ENST00000584054	ADGRB2	O60241	1585 aa		14.13	□□□□□ -0.15
EIF4A1-231	ENST00000584054	XIRP1	Q702N8	1843 aa	Known RBP	14.13	□□□□□ -0.15
EIF4A1-231	ENST00000584054	TMEM94	Q12767	1356 aa		14.13	□□□□□ -0.15
EIF4A1-231	ENST00000584054	PRAM1	Q96QH2	718 aa		14.13	□□□□□ -0.15
EIF4A1-231	ENST00000584054	ADGRL3	Q9HAR2	1447 aa		14.13	□□□□□ -0.15
EIF4A1-231	ENST00000584054	CENPJ	Q9HC77	1338 aa	Predicted RBP	14.13	□□□□□ -0.15
EIF4A1-231	ENST00000584054	EIF3A	Q14152	1382 aa	Known RBP	14.12	□□□□□ -0.15
EIF4A1-231	ENST00000584054	PROSER2	Q86WR7	435 aa	Predicted RBP	14.12	□□□□□ -0.15
EIF4A1-231	ENST00000584054	DCC	P43146	1447 aa		14.12	□□□□□ -0.15
EIF4A1-231	ENST00000584054	ST20-MTHFS	A0A0A6YYL1	179 aa		14.11	□□□□□ -0.15
EIF4A1-231	ENST00000584054	EIF4G2	P78344	907 aa	Known RBP eCLIP	14.11	□□□□□ -0.15	6e-7	■□□□□ 9.9
EIF4A1-231	ENST00000584054	PUS7	Q96PZ0	661 aa	Known RBP	14.11	□□□□□ -0.15
EIF4A1-231	ENST00000584054	C19orf44	Q9H6X5	657 aa		14.1	□□□□□ -0.15
EIF4A1-231	ENST00000584054	HSPA5	P11021	654 aa	Known RBP	14.09	□□□□□ -0.15
EIF4A1-231	ENST00000584054	CDC42BPG	Q6DT37	1551 aa		14.09	□□□□□ -0.15
EIF4A1-231	ENST00000584054	NALCN	Q8IZF0	1738 aa		14.08	□□□□□ -0.16
EIF4A1-231	ENST00000584054	POGK	Q9P215	609 aa		14.07	□□□□□ -0.16
EIF4A1-231	ENST00000584054	QRICH2	Q9H0J4	1663 aa		14.07	□□□□□ -0.16
EIF4A1-231	ENST00000584054	TULP4	Q9NRJ4	1543 aa		14.06	□□□□□ -0.16
EIF4A1-231	ENST00000584054	WASL	O00401	505 aa	Predicted RBP	14.06	□□□□□ -0.16
EIF4A1-231	ENST00000584054	CERK	Q8TCT0	537 aa		14.04	□□□□□ -0.16
EIF4A1-231	ENST00000584054	RBM33	Q96EV2	1170 aa	Known RBP	14.04	□□□□□ -0.16
EIF4A1-231	ENST00000584054	ANKAR	Q7Z5J8	1434 aa		14.04	□□□□□ -0.16
EIF4A1-231	ENST00000584054	MSH6	P52701	1360 aa		14.03	□□□□□ -0.16
EIF4A1-231	ENST00000584054	MST1R	Q04912	1400 aa		14.03	□□□□□ -0.16
EIF4A1-231	ENST00000584054	FMN2	Q9NZ56	1722 aa		14.02	□□□□□ -0.16
EIF4A1-231	ENST00000584054	EVC2	Q86UK5	1308 aa		14.02	□□□□□ -0.17
EIF4A1-231	ENST00000584054	MINK1	Q8N4C8	1332 aa	Predicted RBP	14.02	□□□□□ -0.17
EIF4A1-231	ENST00000584054	C11orf95	C9JLR9	678 aa	Predicted RBP	14.02	□□□□□ -0.17
EIF4A1-231	ENST00000584054	CADPS2	Q86UW7	1296 aa		14.02	□□□□□ -0.17
EIF4A1-231	ENST00000584054	USP32	Q8NFA0	1604 aa		14.01	□□□□□ -0.17
EIF4A1-231	ENST00000584054	DISP3	Q9P2K9	1392 aa		14.01	□□□□□ -0.17
EIF4A1-231	ENST00000584054	PRR36	Q9H6K5	1346 aa		14.01	□□□□□ -0.17
EIF4A1-231	ENST00000584054	ILDR1	Q86SU0	546 aa	Predicted RBP	14.01	□□□□□ -0.17
EIF4A1-231	ENST00000584054	CDK19	Q9BWU1	502 aa		14.01	□□□□□ -0.17
EIF4A1-231	ENST00000584054	ATP7B	P35670	1465 aa		14	□□□□□ -0.17
EIF4A1-231	ENST00000584054	TMF1	P82094	1093 aa		14	□□□□□ -0.17
EIF4A1-231	ENST00000584054	SAFB2	Q14151	953 aa	Known RBP eCLIP	14	□□□□□ -0.17
EIF4A1-231	ENST00000584054	C1orf167	Q5SNV9	1468 aa		13.99	□□□□□ -0.17
EIF4A1-231	ENST00000584054	PLEKHG3	A1L390	1219 aa		13.99	□□□□□ -0.17
EIF4A1-231	ENST00000584054	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.99	□□□□□ -0.17
EIF4A1-231	ENST00000584054	ATAD2	Q6PL18	1390 aa		13.97	□□□□□ -0.17
EIF4A1-231	ENST00000584054	ATF3	P18847	181 aa		13.97	□□□□□ -0.17
EIF4A1-231	ENST00000584054	CDCA8	Q53HL2	280 aa		13.97	□□□□□ -0.17
EIF4A1-231	ENST00000584054	NUDT16	Q96DE0	195 aa	Known RBP	13.97	□□□□□ -0.17
EIF4A1-231	ENST00000584054	SLAIN2	Q9P270	581 aa		13.97	□□□□□ -0.17
EIF4A1-231	ENST00000584054	CCDC61	Q9Y6R9	512 aa		13.97	□□□□□ -0.17
EIF4A1-231	ENST00000584054	TOPAZ1	Q8N9V7	1692 aa		13.97	□□□□□ -0.17
EIF4A1-231	ENST00000584054	POLR3A	O14802	1390 aa	Predicted RBP	13.96	□□□□□ -0.18
EIF4A1-231	ENST00000584054	NINL	Q9Y2I6	1382 aa		13.96	□□□□□ -0.18
EIF4A1-231	ENST00000584054	KIF7	Q2M1P5	1343 aa		13.95	□□□□□ -0.18
EIF4A1-231	ENST00000584054	CABP2	Q9NPB3	220 aa		13.95	□□□□□ -0.18
EIF4A1-231	ENST00000584054	CCDC7	Q96M83	1385 aa		13.95	□□□□□ -0.18
EIF4A1-231	ENST00000584054	WASHC2A	Q641Q2	1341 aa		13.94	□□□□□ -0.18
EIF4A1-231	ENST00000584054	CD163L1	Q9NR16	1453 aa		13.94	□□□□□ -0.18
EIF4A1-231	ENST00000584054	CPSF1	Q10570	1443 aa	Known RBP	13.94	□□□□□ -0.18
EIF4A1-231	ENST00000584054	TOM1	O60784	492 aa		13.93	□□□□□ -0.18
EIF4A1-231	ENST00000584054	C14orf37	Q86TY3	774 aa		13.93	□□□□□ -0.18
EIF4A1-231	ENST00000584054	SSH2	Q76I76	1423 aa		13.92	□□□□□ -0.18
EIF4A1-231	ENST00000584054	BRINP3	Q76B58	766 aa		13.92	□□□□□ -0.18
EIF4A1-231	ENST00000584054	SRPK2	P78362	688 aa	Known RBP	13.91	□□□□□ -0.18
EIF4A1-231	ENST00000584054	ORAI2	Q96SN7	254 aa		13.91	□□□□□ -0.18
EIF4A1-231	ENST00000584054	MYOM1	P52179	1685 aa		13.91	□□□□□ -0.18
EIF4A1-231	ENST00000584054	RGPD8	O14715	1765 aa	Predicted RBP	13.91	□□□□□ -0.18
EIF4A1-231	ENST00000584054	PPIP5K1	Q6PFW1	1433 aa		13.9	□□□□□ -0.18
EIF4A1-231	ENST00000584054	ITSN1	Q15811	1721 aa		13.9	□□□□□ -0.18
EIF4A1-231	ENST00000584054	CABP1	Q9NZU7	370 aa		13.9	□□□□□ -0.18
EIF4A1-231	ENST00000584054	PHF8	Q9UPP1	1060 aa		13.9	□□□□□ -0.18
EIF4A1-231	ENST00000584054	BRD4	O60885	1362 aa	Predicted RBP	13.9	□□□□□ -0.18
EIF4A1-231	ENST00000584054	KIF1A	Q12756	1690 aa		13.9	□□□□□ -0.18
EIF4A1-231	ENST00000584054	SLC12A5	Q9H2X9	1139 aa		13.89	□□□□□ -0.19
EIF4A1-231	ENST00000584054	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.89	□□□□□ -0.19
EIF4A1-231	ENST00000584054	ANKRD36B	Q8N2N9	1353 aa		13.88	□□□□□ -0.19
EIF4A1-231	ENST00000584054	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.88	□□□□□ -0.19
EIF4A1-231	ENST00000584054	ZNF692	Q9BU19	519 aa	Predicted RBP	13.88	□□□□□ -0.19
EIF4A1-231	ENST00000584054	NHSL1	Q5SYE7	1610 aa		13.88	□□□□□ -0.19
EIF4A1-231	ENST00000584054	ACE	P12821	1306 aa		13.88	□□□□□ -0.19
EIF4A1-231	ENST00000584054	SOS2	Q07890	1332 aa	Predicted RBP	13.88	□□□□□ -0.19
EIF4A1-231	ENST00000584054	PXDN	Q92626	1479 aa		13.87	□□□□□ -0.19
EIF4A1-231	ENST00000584054	UBAP1L	F5GYI3	381 aa		13.87	□□□□□ -0.19
EIF4A1-231	ENST00000584054	ESCO1	Q5FWF5	840 aa		13.87	□□□□□ -0.19
EIF4A1-231	ENST00000584054	ROBO1	Q9Y6N7	1651 aa		13.86	□□□□□ -0.19
EIF4A1-231	ENST00000584054	NUTM2F	A1L443	756 aa		13.86	□□□□□ -0.19
EIF4A1-231	ENST00000584054	PER1	O15534	1290 aa	Predicted RBP	13.86	□□□□□ -0.19
EIF4A1-231	ENST00000584054	AKAP12	Q02952	1782 aa		13.86	□□□□□ -0.19
EIF4A1-231	ENST00000584054	CARD14	Q9BXL6	1004 aa		13.85	□□□□□ -0.19
EIF4A1-231	ENST00000584054	NPHP3	Q7Z494	1330 aa		13.85	□□□□□ -0.19
EIF4A1-231	ENST00000584054		A0A1W2PP64	1363 aa		13.84	□□□□□ -0.19
EIF4A1-231	ENST00000584054	SBNO1	A3KN83	1393 aa		13.84	□□□□□ -0.19
EIF4A1-231	ENST00000584054	USP6	P35125	1406 aa		13.84	□□□□□ -0.19
EIF4A1-231	ENST00000584054	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.84	□□□□□ -0.19
EIF4A1-231	ENST00000584054	NRK	Q7Z2Y5	1582 aa		13.83	□□□□□ -0.19
EIF4A1-231	ENST00000584054	FOXO3	O43524	673 aa		13.83	□□□□□ -0.2
EIF4A1-231	ENST00000584054	PMFBP1	Q8TBY8	1022 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 16 ms