RNA–Protein interactions for RNA: ENST00000584049.5

BDNF-219, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,030 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-219ENST00000584049 COG6Q9Y2V7 657 aa11.12□□□□□ -0.63
BDNF-219ENST00000584049 RARSP54136 660 aaKnown RBP11.12□□□□□ -0.63
BDNF-219ENST00000584049 CCDC27Q2M243 656 aa11.12□□□□□ -0.63
BDNF-219ENST00000584049 PANK1Q8TE04 598 aa11.12□□□□□ -0.63
BDNF-219ENST00000584049 RUNDC1Q96C34 613 aa11.12□□□□□ -0.63
BDNF-219ENST00000584049 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.11□□□□□ -0.63
BDNF-219ENST00000584049 SEC24BO95487 1268 aa11.11□□□□□ -0.63
BDNF-219ENST00000584049 ZC3H13Q5T200 1668 aaKnown RBP11.1□□□□□ -0.63
BDNF-219ENST00000584049 ADGRL1O94910 1474 aa11.1□□□□□ -0.63
BDNF-219ENST00000584049 POGKQ9P215 609 aa11.1□□□□□ -0.63
BDNF-219ENST00000584049 ATP7AQ04656 1500 aa11.1□□□□□ -0.63
BDNF-219ENST00000584049 RWDD1Q9H446 243 aaPredicted RBP11.09□□□□□ -0.63
BDNF-219ENST00000584049 MROH1Q8NDA8 1641 aa11.09□□□□□ -0.63
BDNF-219ENST00000584049 EFCAB6Q5THR3 1501 aa11.09□□□□□ -0.63
BDNF-219ENST00000584049 CT47B1P0C2W7 299 aaPredicted RBP11.08□□□□□ -0.64
BDNF-219ENST00000584049 NSD3Q9BZ95 1437 aa11.08□□□□□ -0.64
BDNF-219ENST00000584049 CFAP70Q5T0N1 1121 aa11.08□□□□□ -0.64
BDNF-219ENST00000584049 PDZRN3Q9UPQ7 1066 aa11.08□□□□□ -0.64
BDNF-219ENST00000584049 ZNF518AQ6AHZ1 1483 aa11.08□□□□□ -0.64
BDNF-219ENST00000584049 PCDHB15Q9Y5E8 787 aa11.07□□□□□ -0.64
BDNF-219ENST00000584049 ADGRB2O60241 1585 aa11.07□□□□□ -0.64
BDNF-219ENST00000584049 ERCC6L2Q5T890 1561 aa11.07□□□□□ -0.64
BDNF-219ENST00000584049 TBC1D2Q9BYX2 928 aa11.07□□□□□ -0.64
BDNF-219ENST00000584049 FANCAO15360 1455 aa11.07□□□□□ -0.64
BDNF-219ENST00000584049 LMTK2Q8IWU2 1503 aa11.07□□□□□ -0.64
BDNF-219ENST00000584049 SLKQ9H2G2 1235 aaPredicted RBP11.07□□□□□ -0.64
BDNF-219ENST00000584049 ABCA9Q8IUA7 1624 aa11.07□□□□□ -0.64
BDNF-219ENST00000584049 ADGRB3O60242 1522 aa11.07□□□□□ -0.64
BDNF-219ENST00000584049 MORC1Q86VD1 984 aa11.06□□□□□ -0.64
BDNF-219ENST00000584049 MROH2AA6NES4 1674 aa11.06□□□□□ -0.64
BDNF-219ENST00000584049 TCP11L2Q8N4U5 519 aa11.06□□□□□ -0.64
BDNF-219ENST00000584049 UBE2Q2Q8WVN8 375 aa11.06□□□□□ -0.64
BDNF-219ENST00000584049 MYH16Q9H6N6 1097 aa11.06□□□□□ -0.64
BDNF-219ENST00000584049 NSD2O96028 1365 aa11.06□□□□□ -0.64
BDNF-219ENST00000584049 ADGRF5Q8IZF2 1346 aa11.06□□□□□ -0.64
BDNF-219ENST00000584049 QRICH2Q9H0J4 1663 aa11.05□□□□□ -0.64
BDNF-219ENST00000584049 RLBP1P12271 317 aa11.05□□□□□ -0.64
BDNF-219ENST00000584049 PUS7Q96PZ0 661 aaKnown RBP11.05□□□□□ -0.64
BDNF-219ENST00000584049 FSD2A1L4K1 749 aa11.05□□□□□ -0.64
BDNF-219ENST00000584049 CFAP53Q96M91 514 aa11.05□□□□□ -0.64
BDNF-219ENST00000584049 MVPQ14764 893 aaKnown RBP11.05□□□□□ -0.64
BDNF-219ENST00000584049 UGGT1Q9NYU2 1555 aa11.04□□□□□ -0.64
BDNF-219ENST00000584049 AFAP1Q8N556 730 aa11.04□□□□□ -0.64
BDNF-219ENST00000584049 CHMP5Q9NZZ3 219 aa11.04□□□□□ -0.64
BDNF-219ENST00000584049 MCM4P33991 863 aa11.03□□□□□ -0.64
BDNF-219ENST00000584049 PPRC1Q5VV67 1664 aaKnown RBP11.03□□□□□ -0.64
BDNF-219ENST00000584049 ZKSCAN2Q63HK3 967 aa11.03□□□□□ -0.64
BDNF-219ENST00000584049 ISY1Q9ULR0 285 aaKnown RBP11.03□□□□□ -0.64
BDNF-219ENST00000584049 ADGRB1O14514 1584 aa11.03□□□□□ -0.64
BDNF-219ENST00000584049 PPLO60437 1756 aa11.02□□□□□ -0.64
BDNF-219ENST00000584049 GOLGA6L3A6NEY3 463 aa11.02□□□□□ -0.64
BDNF-219ENST00000584049 HDAC1Q13547 482 aaPredicted RBP11.02□□□□□ -0.64
BDNF-219ENST00000584049 NOS1P29475 1434 aa11.01□□□□□ -0.65
BDNF-219ENST00000584049 KIF3BO15066 747 aa11.01□□□□□ -0.65
BDNF-219ENST00000584049 DZIP1LQ8IYY4 767 aaKnown RBP11.01□□□□□ -0.65
BDNF-219ENST00000584049 C22orf23Q9BZE7 217 aa11.01□□□□□ -0.65
BDNF-219ENST00000584049 RRP7AQ9Y3A4 280 aaKnown RBP11.01□□□□□ -0.65
BDNF-219ENST00000584049 NCOA3Q9Y6Q9 1424 aa11.01□□□□□ -0.65
BDNF-219ENST00000584049 EIF5BO60841 1220 aaKnown RBP11□□□□□ -0.65
BDNF-219ENST00000584049 RRAGDQ9NQL2 400 aaPredicted RBP11□□□□□ -0.65
BDNF-219ENST00000584049 TNNQ9UQP3 1299 aa11□□□□□ -0.65
BDNF-219ENST00000584049 NEUROD2Q15784 382 aa11□□□□□ -0.65
BDNF-219ENST00000584049 C14orf93Q9H972 538 aaKnown RBP11□□□□□ -0.65
BDNF-219ENST00000584049 DDX11L8A8MPP1 907 aa11□□□□□ -0.65
BDNF-219ENST00000584049 XRCC6P12956 609 aaKnown RBP eCLIP11□□□□□ -0.65
BDNF-219ENST00000584049 MTHFSP49914 203 aa11□□□□□ -0.65
BDNF-219ENST00000584049 FTSJ3Q8IY81 847 aaKnown RBP10.99□□□□□ -0.65
BDNF-219ENST00000584049 DDX19BQ9UMR2 479 aa10.99□□□□□ -0.65
BDNF-219ENST00000584049 ANKRD36BQ8N2N9 1353 aa10.99□□□□□ -0.65
BDNF-219ENST00000584049 ABCC11Q96J66 1382 aa10.99□□□□□ -0.65
BDNF-219ENST00000584049 RPGRIP1LQ68CZ1 1315 aa10.99□□□□□ -0.65
BDNF-219ENST00000584049 IL16Q14005 1332 aa10.99□□□□□ -0.65
BDNF-219ENST00000584049 SMC5Q8IY18 1101 aa10.99□□□□□ -0.65
BDNF-219ENST00000584049 MRE11P49959 708 aa10.98□□□□□ -0.65
BDNF-219ENST00000584049 SLC12A5Q9H2X9 1139 aa10.98□□□□□ -0.65
BDNF-219ENST00000584049 CLCN1P35523 988 aa10.98□□□□□ -0.65
BDNF-219ENST00000584049 BCL2L13Q9BXK5 485 aa10.98□□□□□ -0.65
BDNF-219ENST00000584049 HSCBQ8IWL3 235 aa10.97□□□□□ -0.65
BDNF-219ENST00000584049 SNX21Q969T3 373 aa10.97□□□□□ -0.65
BDNF-219ENST00000584049 TRAK2O60296 914 aa10.97□□□□□ -0.65
BDNF-219ENST00000584049 CIZ1Q9ULV3 898 aaPredicted RBP10.97□□□□□ -0.65
BDNF-219ENST00000584049 KIDINS220Q9ULH0 1771 aa10.97□□□□□ -0.65
BDNF-219ENST00000584049 ZNF692Q9BU19 519 aaPredicted RBP10.96□□□□□ -0.65
BDNF-219ENST00000584049 DDIT3P35638 169 aa10.96□□□□□ -0.65
BDNF-219ENST00000584049 RBM25P49756 843 aaKnown RBP10.96□□□□□ -0.65
BDNF-219ENST00000584049 ARHGEF28Q8N1W1 1705 aaKnown RBP10.96□□□□□ -0.66
BDNF-219ENST00000584049 GLI2P10070 1586 aa10.96□□□□□ -0.66
BDNF-219ENST00000584049 PTMSP20962 102 aa10.96□□□□□ -0.66
BDNF-219ENST00000584049 TULP4Q9NRJ4 1543 aa10.96□□□□□ -0.66
BDNF-219ENST00000584049 MFAP1P55081 439 aaKnown RBP10.95□□□□□ -0.66
BDNF-219ENST00000584049 EVC2Q86UK5 1308 aa10.95□□□□□ -0.66
BDNF-219ENST00000584049 TRIM27P14373 513 aa10.95□□□□□ -0.66
BDNF-219ENST00000584049 TNNT2P45379 298 aaPredicted RBP10.95□□□□□ -0.66
BDNF-219ENST00000584049 ATF7IPQ6VMQ6 1270 aa10.95□□□□□ -0.66
BDNF-219ENST00000584049 SMC4Q9NTJ3 1288 aa10.95□□□□□ -0.66
BDNF-219ENST00000584049 COL3A1P02461 1466 aaPredicted RBP10.95□□□□□ -0.66
BDNF-219ENST00000584049 U2AF1L5P0DN76 240 aaPredicted RBP10.95□□□□□ -0.66
BDNF-219ENST00000584049 U2AF1Q01081 240 aaKnown RBP eCLIP10.95□□□□□ -0.66
BDNF-219ENST00000584049 TRAK1Q9UPV9 953 aa10.95□□□□□ -0.66
BDNF-219ENST00000584049 KIF16BQ96L93 1317 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms