RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 MSS51Q4VC12 460 aa8.94□□□□□ -0.98
PPP4R1-227ENST00000583988 SPRYD7Q5W111 196 aa8.94□□□□□ -0.98
PPP4R1-227ENST00000583988 SPIRE2Q8WWL2 714 aa8.94□□□□□ -0.98
PPP4R1-227ENST00000583988 USB1Q9BQ65 265 aaKnown RBP8.94□□□□□ -0.98
PPP4R1-227ENST00000583988 BEGAINQ9BUH8 593 aa8.94□□□□□ -0.98
PPP4R1-227ENST00000583988 SYMPKQ92797 1274 aaKnown RBP8.93□□□□□ -0.98
PPP4R1-227ENST00000583988 FDX1P10109 184 aa8.92□□□□□ -0.98
PPP4R1-227ENST00000583988 ZNF697Q5TEC3 545 aa8.92□□□□□ -0.98
PPP4R1-227ENST00000583988 ZNF598Q86UK7 904 aaKnown RBP8.92□□□□□ -0.98
PPP4R1-227ENST00000583988 NRG2O14511 850 aaPredicted RBP8.91□□□□□ -0.98
PPP4R1-227ENST00000583988 MS4A1P11836 297 aa8.91□□□□□ -0.98
PPP4R1-227ENST00000583988 NDUFV2P19404 249 aa8.91□□□□□ -0.98
PPP4R1-227ENST00000583988 PDE4DQ08499 809 aa8.91□□□□□ -0.98
PPP4R1-227ENST00000583988 C6orf229H3BNL8 230 aa8.9□□□□□ -0.98
PPP4R1-227ENST00000583988 MOXD2PA6NHM9 499 aa8.89□□□□□ -0.99
PPP4R1-227ENST00000583988 TRIM67Q6ZTA4 783 aa8.89□□□□□ -0.99
PPP4R1-227ENST00000583988 PCDHGC3Q9UN70 934 aa8.89□□□□□ -0.99
PPP4R1-227ENST00000583988 TNFRSF10AO00220 468 aa8.88□□□□□ -0.99
PPP4R1-227ENST00000583988 ZBTB24O43167 697 aaPredicted RBP8.88□□□□□ -0.99
PPP4R1-227ENST00000583988 MMP16P51512 607 aa8.88□□□□□ -0.99
PPP4R1-227ENST00000583988 CCDC24Q8N4L8 307 aa8.88□□□□□ -0.99
PPP4R1-227ENST00000583988 TBC1D2Q9BYX2 928 aa8.88□□□□□ -0.99
PPP4R1-227ENST00000583988 DXOO77932 396 aaKnown RBP8.87□□□□□ -0.99
PPP4R1-227ENST00000583988 CD2BP2O95400 341 aaKnown RBP8.87□□□□□ -0.99
PPP4R1-227ENST00000583988 RPIAP49247 311 aa8.87□□□□□ -0.99
PPP4R1-227ENST00000583988 FOXC1Q12948 553 aa8.87□□□□□ -0.99
PPP4R1-227ENST00000583988 RETREG3Q86VR2 466 aa8.86□□□□□ -0.99
PPP4R1-227ENST00000583988 JUNDP17535 347 aa8.84□□□□□ -0.99
PPP4R1-227ENST00000583988 DIXDC1Q155Q3 683 aa8.84□□□□□ -0.99
PPP4R1-227ENST00000583988 GDF9O60383 454 aa8.83□□□□□ -1
PPP4R1-227ENST00000583988 TRAF7Q6Q0C0 670 aa8.83□□□□□ -1
PPP4R1-227ENST00000583988 PRR20EP86478 221 aa8.82□□□□□ -1
PPP4R1-227ENST00000583988 PRR20CP86479 221 aa8.82□□□□□ -1
PPP4R1-227ENST00000583988 PRR20DP86480 221 aa8.82□□□□□ -1
PPP4R1-227ENST00000583988 PRR20BP86481 221 aa8.82□□□□□ -1
PPP4R1-227ENST00000583988 PRR20AP86496 221 aa8.82□□□□□ -1
PPP4R1-227ENST00000583988 MTMR2Q13614 643 aa8.82□□□□□ -1
PPP4R1-227ENST00000583988 CSPP1Q1MSJ5 1256 aa8.82□□□□□ -1
PPP4R1-227ENST00000583988 RSBN1LQ6PCB5 846 aaPredicted RBP8.82□□□□□ -1
PPP4R1-227ENST00000583988 LCE2BO14633 110 aa8.81□□□□□ -1
PPP4R1-227ENST00000583988 TRIM32Q13049 653 aa8.81□□□□□ -1
PPP4R1-227ENST00000583988 PKDCCQ504Y2 493 aa8.81□□□□□ -1
PPP4R1-227ENST00000583988 RIC3Q7Z5B4 369 aa8.81□□□□□ -1
PPP4R1-227ENST00000583988 PRR7Q8TB68 274 aa8.81□□□□□ -1
PPP4R1-227ENST00000583988 PKD2L1Q9P0L9 805 aa8.81□□□□□ -1
PPP4R1-227ENST00000583988 PCDHB15Q9Y5E8 787 aa8.81□□□□□ -1
PPP4R1-227ENST00000583988 NUDT12Q9BQG2 462 aa8.8□□□□□ -1
PPP4R1-227ENST00000583988 FAM187AA6NFU0 413 aa8.79□□□□□ -1
PPP4R1-227ENST00000583988 SPTLC1O15269 473 aa8.79□□□□□ -1
PPP4R1-227ENST00000583988 BRPF1P55201 1214 aaPredicted RBP8.79□□□□□ -1
PPP4R1-227ENST00000583988 SPDYE5A6NIY4 337 aa8.78□□□□□ -1
PPP4R1-227ENST00000583988 GJA5P36382 358 aa8.78□□□□□ -1
PPP4R1-227ENST00000583988 MYSM1Q5VVJ2 828 aa8.78□□□□□ -1
PPP4R1-227ENST00000583988 GPBP1L1Q9HC44 474 aaPredicted RBP8.78□□□□□ -1
PPP4R1-227ENST00000583988 NEUROD2Q15784 382 aa8.77□□□□□ -1.01
PPP4R1-227ENST00000583988 CABLES1Q8TDN4 633 aa8.77□□□□□ -1.01
PPP4R1-227ENST00000583988 ZBTB3Q9H5J0 574 aa8.77□□□□□ -1.01
PPP4R1-227ENST00000583988 CCNYL3P0C7X3 344 aa8.76□□□□□ -1.01
PPP4R1-227ENST00000583988 HRCP23327 699 aa8.76□□□□□ -1.01
PPP4R1-227ENST00000583988 PTCRAQ6ISU1 281 aaPredicted RBP8.76□□□□□ -1.01
PPP4R1-227ENST00000583988 CYP4X1Q8N118 509 aa8.76□□□□□ -1.01
PPP4R1-227ENST00000583988 KDM4CQ9H3R0 1056 aa8.76□□□□□ -1.01
PPP4R1-227ENST00000583988 LIMD1Q9UGP4 676 aa8.76□□□□□ -1.01
PPP4R1-227ENST00000583988 CFAP99D6REC4 459 aa8.75□□□□□ -1.01
PPP4R1-227ENST00000583988 DGAT1O75907 488 aa8.75□□□□□ -1.01
PPP4R1-227ENST00000583988 TSC1Q92574 1164 aa8.75□□□□□ -1.01
PPP4R1-227ENST00000583988 NUTM2BA6NNL0 878 aaPredicted RBP8.74□□□□□ -1.01
PPP4R1-227ENST00000583988 NUTM2EB1AL46 878 aaPredicted RBP8.74□□□□□ -1.01
PPP4R1-227ENST00000583988 WNT7AO00755 349 aa8.74□□□□□ -1.01
PPP4R1-227ENST00000583988 PTPRNQ16849 979 aa8.74□□□□□ -1.01
PPP4R1-227ENST00000583988 NUTM2DQ5VT03 806 aaPredicted RBP8.74□□□□□ -1.01
PPP4R1-227ENST00000583988 NUTM2AQ8IVF1 878 aaPredicted RBP8.74□□□□□ -1.01
PPP4R1-227ENST00000583988 POLR3EQ9NVU0 708 aa8.74□□□□□ -1.01
PPP4R1-227ENST00000583988 TTC24A2A3L6 582 aaPredicted RBP8.73□□□□□ -1.01
PPP4R1-227ENST00000583988 MYT1Q01538 1121 aa8.73□□□□□ -1.01
PPP4R1-227ENST00000583988 QPCTQ16769 361 aa8.73□□□□□ -1.01
PPP4R1-227ENST00000583988 PRPF38BQ5VTL8 546 aaKnown RBP8.73□□□□□ -1.01
PPP4R1-227ENST00000583988 MRGPRX2Q96LB1 330 aa8.73□□□□□ -1.01
PPP4R1-227ENST00000583988 RSPH6AQ9H0K4 717 aa8.73□□□□□ -1.01
PPP4R1-227ENST00000583988 TOR4AQ9NXH8 423 aa8.73□□□□□ -1.01
PPP4R1-227ENST00000583988 SKOR1P84550 965 aa8.72□□□□□ -1.01
PPP4R1-227ENST00000583988 RC3H1Q5TC82 1133 aaKnown RBP8.72□□□□□ -1.01
PPP4R1-227ENST00000583988 DESI1Q6ICB0 168 aa8.72□□□□□ -1.01
PPP4R1-227ENST00000583988 EVA1BQ9NVM1 165 aa8.72□□□□□ -1.01
PPP4R1-227ENST00000583988 CTHP32929 405 aa8.71□□□□□ -1.02
PPP4R1-227ENST00000583988 CLK2P49760 499 aaKnown RBP8.71□□□□□ -1.02
PPP4R1-227ENST00000583988 FAM117AQ9C073 453 aa8.71□□□□□ -1.02
PPP4R1-227ENST00000583988 UNC93B1Q9H1C4 597 aa8.71□□□□□ -1.02
PPP4R1-227ENST00000583988 ATP1B4Q9UN42 357 aaPredicted RBP8.71□□□□□ -1.02
PPP4R1-227ENST00000583988 WNT7BP56706 349 aa8.7□□□□□ -1.02
PPP4R1-227ENST00000583988 KCNH2Q12809 1159 aa8.7□□□□□ -1.02
PPP4R1-227ENST00000583988 LILRB3O75022 631 aa8.69□□□□□ -1.02
PPP4R1-227ENST00000583988 LINC01559Q495D7 138 aa8.69□□□□□ -1.02
PPP4R1-227ENST00000583988 LYPD8Q6UX82 237 aa8.69□□□□□ -1.02
PPP4R1-227ENST00000583988 SNIP1Q8TAD8 396 aaKnown RBP8.69□□□□□ -1.02
PPP4R1-227ENST00000583988 ST8SIA5O15466 376 aa8.68□□□□□ -1.02
PPP4R1-227ENST00000583988 RTL5Q5HYW3 569 aaPredicted RBP8.68□□□□□ -1.02
PPP4R1-227ENST00000583988 BAP1Q92560 729 aa8.68□□□□□ -1.02
PPP4R1-227ENST00000583988 DDRGK1Q96HY6 314 aa8.68□□□□□ -1.02
PPP4R1-227ENST00000583988 J3QL48 77 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms