RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-223	ENST00000583877	C1orf167	Q5SNV9	1468 aa		13.36	□□□□□ -0.27
NUP85-223	ENST00000583877	DDX17	Q92841	729 aa	Known RBP	13.36	□□□□□ -0.27
NUP85-223	ENST00000583877	ITGAE	P38570	1179 aa		13.35	□□□□□ -0.27
NUP85-223	ENST00000583877	PTCH1	Q13635	1447 aa		13.35	□□□□□ -0.27
NUP85-223	ENST00000583877	PRAG1	Q86YV5	1406 aa		13.33	□□□□□ -0.28
NUP85-223	ENST00000583877	NGLY1	Q96IV0	654 aa		13.33	□□□□□ -0.28
NUP85-223	ENST00000583877	ADAMTS2	O95450	1211 aa		13.32	□□□□□ -0.28
NUP85-223	ENST00000583877	SOS2	Q07890	1332 aa	Predicted RBP	13.32	□□□□□ -0.28
NUP85-223	ENST00000583877	ATAD2	Q6PL18	1390 aa		13.32	□□□□□ -0.28
NUP85-223	ENST00000583877	MYCN	P04198	464 aa	Predicted RBP	13.31	□□□□□ -0.28
NUP85-223	ENST00000583877	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.3	□□□□□ -0.28
NUP85-223	ENST00000583877	ROBO2	Q9HCK4	1378 aa		13.3	□□□□□ -0.28
NUP85-223	ENST00000583877	VGF	O15240	615 aa	Predicted RBP	13.29	□□□□□ -0.28
NUP85-223	ENST00000583877	ORAI2	Q96SN7	254 aa		13.29	□□□□□ -0.28
NUP85-223	ENST00000583877	USP21	Q9UK80	565 aa		13.29	□□□□□ -0.28
NUP85-223	ENST00000583877	TRPC5	Q9UL62	973 aa	Predicted RBP	13.29	□□□□□ -0.28
NUP85-223	ENST00000583877	HFM1	A2PYH4	1435 aa		13.29	□□□□□ -0.28
NUP85-223	ENST00000583877	CDC42BPG	Q6DT37	1551 aa		13.28	□□□□□ -0.28
NUP85-223	ENST00000583877	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.28	□□□□□ -0.28
NUP85-223	ENST00000583877	ATRN	O75882	1429 aa		13.28	□□□□□ -0.28
NUP85-223	ENST00000583877	BRWD3	Q6RI45	1802 aa		13.27	□□□□□ -0.28
NUP85-223	ENST00000583877	IFT172	Q9UG01	1749 aa		13.27	□□□□□ -0.29
NUP85-223	ENST00000583877	RGPD8	O14715	1765 aa	Predicted RBP	13.26	□□□□□ -0.29
NUP85-223	ENST00000583877	MYOM2	P54296	1465 aa		13.26	□□□□□ -0.29
NUP85-223	ENST00000583877	NAIP	Q13075	1403 aa		13.26	□□□□□ -0.29
NUP85-223	ENST00000583877	RPGRIP1L	Q68CZ1	1315 aa		13.26	□□□□□ -0.29
NUP85-223	ENST00000583877	KNDC1	Q76NI1	1749 aa		13.26	□□□□□ -0.29
NUP85-223	ENST00000583877	PXDN	Q92626	1479 aa		13.25	□□□□□ -0.29
NUP85-223	ENST00000583877	ATXN8OS	P0DMR3	200 aa		13.25	□□□□□ -0.29
NUP85-223	ENST00000583877	NPHP3	Q7Z494	1330 aa		13.24	□□□□□ -0.29
NUP85-223	ENST00000583877	BCL9L	Q86UU0	1499 aa		13.23	□□□□□ -0.29
NUP85-223	ENST00000583877	FMN2	Q9NZ56	1722 aa		13.23	□□□□□ -0.29
NUP85-223	ENST00000583877	KIF1A	Q12756	1690 aa		13.23	□□□□□ -0.29
NUP85-223	ENST00000583877	RRBP1	Q9P2E9	1410 aa	Known RBP	13.22	□□□□□ -0.29
NUP85-223	ENST00000583877	DCAF8L1	A6NGE4	600 aa		13.22	□□□□□ -0.29
NUP85-223	ENST00000583877	CCDC125	Q86Z20	511 aa		13.22	□□□□□ -0.29
NUP85-223	ENST00000583877	ZRANB1	Q9UGI0	708 aa		13.22	□□□□□ -0.29
NUP85-223	ENST00000583877	ESCO1	Q5FWF5	840 aa		13.21	□□□□□ -0.29
NUP85-223	ENST00000583877	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.21	□□□□□ -0.29
NUP85-223	ENST00000583877	NWD2	Q9ULI1	1742 aa		13.2	□□□□□ -0.3
NUP85-223	ENST00000583877	GLI3	P10071	1580 aa		13.2	□□□□□ -0.3
NUP85-223	ENST00000583877	LRPPRC	P42704	1394 aa	Known RBP	13.2	□□□□□ -0.3
NUP85-223	ENST00000583877	USP32	Q8NFA0	1604 aa		13.19	□□□□□ -0.3
NUP85-223	ENST00000583877	TECPR2	O15040	1411 aa		13.19	□□□□□ -0.3
NUP85-223	ENST00000583877	PLCH1	Q4KWH8	1693 aa		13.18	□□□□□ -0.3
NUP85-223	ENST00000583877	FOXO3	O43524	673 aa		13.18	□□□□□ -0.3
NUP85-223	ENST00000583877	GJD4	Q96KN9	370 aa	Predicted RBP	13.18	□□□□□ -0.3
NUP85-223	ENST00000583877	ABCA3	Q99758	1704 aa		13.18	□□□□□ -0.3
NUP85-223	ENST00000583877	SLIT2	O94813	1529 aa		13.17	□□□□□ -0.3
NUP85-223	ENST00000583877	XPC	Q01831	940 aa	Predicted RBP	13.16	□□□□□ -0.3
NUP85-223	ENST00000583877	RALGAPB	Q86X10	1494 aa		13.16	□□□□□ -0.3
NUP85-223	ENST00000583877	UNC5CL	Q8IV45	518 aa		13.15	□□□□□ -0.3
NUP85-223	ENST00000583877	SPATA31A3	Q5VYP0	1347 aa		13.14	□□□□□ -0.31
NUP85-223	ENST00000583877	ADGRF5	Q8IZF2	1346 aa		13.14	□□□□□ -0.31
NUP85-223	ENST00000583877	CCDC144A	A2RUR9	1427 aa		13.14	□□□□□ -0.31
NUP85-223	ENST00000583877	BLM	P54132	1417 aa	Predicted RBP	13.14	□□□□□ -0.31
NUP85-223	ENST00000583877	WAPL	Q7Z5K2	1190 aa		13.14	□□□□□ -0.31
NUP85-223	ENST00000583877	ABCC11	Q96J66	1382 aa		13.14	□□□□□ -0.31
NUP85-223	ENST00000583877	ANKRD30B	Q9BXX2	1392 aa		13.14	□□□□□ -0.31
NUP85-223	ENST00000583877	SPATA31E1	Q6ZUB1	1445 aa		13.13	□□□□□ -0.31
NUP85-223	ENST00000583877	NUTM2F	A1L443	756 aa		13.13	□□□□□ -0.31
NUP85-223	ENST00000583877	STK26	Q9P289	416 aa		13.13	□□□□□ -0.31
NUP85-223	ENST00000583877	LRP5	O75197	1615 aa		13.13	□□□□□ -0.31
NUP85-223	ENST00000583877	PIK3C2G	O75747	1445 aa		13.12	□□□□□ -0.31
NUP85-223	ENST00000583877	PLEKHH1	Q9ULM0	1364 aa		13.11	□□□□□ -0.31
NUP85-223	ENST00000583877	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.11	□□□□□ -0.31
NUP85-223	ENST00000583877	NRAP	Q86VF7	1730 aa		13.1	□□□□□ -0.31
NUP85-223	ENST00000583877	RGL3	Q3MIN7	710 aa		13.1	□□□□□ -0.31
NUP85-223	ENST00000583877	KRT28	Q7Z3Y7	464 aa		13.1	□□□□□ -0.31
NUP85-223	ENST00000583877	TNS3	Q68CZ2	1445 aa		13.1	□□□□□ -0.31
NUP85-223	ENST00000583877	TMEM132E	Q6IEE7	984 aa		13.09	□□□□□ -0.31
NUP85-223	ENST00000583877	SIRT1	Q96EB6	747 aa		13.09	□□□□□ -0.31
NUP85-223	ENST00000583877	RGPD1	P0DJD0	1748 aa		13.08	□□□□□ -0.32
NUP85-223	ENST00000583877	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.08	□□□□□ -0.32
NUP85-223	ENST00000583877	VPS72	Q15906	364 aa		13.08	□□□□□ -0.32
NUP85-223	ENST00000583877	NRXN1	Q9ULB1	1477 aa		13.08	□□□□□ -0.32
NUP85-223	ENST00000583877	ONECUT3	O60422	494 aa	Predicted RBP	13.07	□□□□□ -0.32
NUP85-223	ENST00000583877	PSME1	Q06323	249 aa		13.07	□□□□□ -0.32
NUP85-223	ENST00000583877	SF3B2	Q13435	895 aa	Known RBP	13.07	□□□□□ -0.32
NUP85-223	ENST00000583877	SEPT12	Q8IYM1	358 aa		13.07	□□□□□ -0.32
NUP85-223	ENST00000583877	ALS2	Q96Q42	1657 aa		13.07	□□□□□ -0.32
NUP85-223	ENST00000583877	SBNO1	A3KN83	1393 aa		13.07	□□□□□ -0.32
NUP85-223	ENST00000583877	HAP1	P54257	671 aa	Predicted RBP	13.06	□□□□□ -0.32
NUP85-223	ENST00000583877	DEFB132	Q7Z7B7	95 aa		13.06	□□□□□ -0.32
NUP85-223	ENST00000583877	PHF8	Q9UPP1	1060 aa		13.06	□□□□□ -0.32
NUP85-223	ENST00000583877	COL14A1	Q05707	1796 aa	Known RBP	13.06	□□□□□ -0.32
NUP85-223	ENST00000583877	ARHGEF10	O15013	1369 aa		13.06	□□□□□ -0.32
NUP85-223	ENST00000583877	CRYBG1	Q9Y4K1	1723 aa		13.05	□□□□□ -0.32
NUP85-223	ENST00000583877	ADGRB2	O60241	1585 aa		13.05	□□□□□ -0.32
NUP85-223	ENST00000583877	KRT27	Q7Z3Y8	459 aa		13.04	□□□□□ -0.32
NUP85-223	ENST00000583877	CABLES1	Q8TDN4	633 aa		13.04	□□□□□ -0.32
NUP85-223	ENST00000583877	MPHOSPH9	Q99550	1183 aa		13.04	□□□□□ -0.32
NUP85-223	ENST00000583877	C14orf93	Q9H972	538 aa	Known RBP	13.04	□□□□□ -0.32
NUP85-223	ENST00000583877	DHX57	Q6P158	1386 aa	Known RBP	13.04	□□□□□ -0.32
NUP85-223	ENST00000583877	DLC1	Q96QB1	1528 aa		13.03	□□□□□ -0.32
NUP85-223	ENST00000583877	TNS1	Q9HBL0	1735 aa	Known RBP	13.03	□□□□□ -0.32
NUP85-223	ENST00000583877	CCDC9	Q9Y3X0	531 aa	Known RBP	13.03	□□□□□ -0.32
NUP85-223	ENST00000583877	ANKAR	Q7Z5J8	1434 aa		13.02	□□□□□ -0.33
NUP85-223	ENST00000583877	ITSN1	Q15811	1721 aa		13.02	□□□□□ -0.33
NUP85-223	ENST00000583877	FAM83G	A6ND36	823 aa		13.01	□□□□□ -0.33

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