RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 C14orf37Q86TY3 774 aa13.11□□□□□ -0.31
UBBP4-201ENST00000583708 TOM1O60784 492 aa13.1□□□□□ -0.31
UBBP4-201ENST00000583708 WAPLQ7Z5K2 1190 aa13.1□□□□□ -0.31
UBBP4-201ENST00000583708 ADGRL3Q9HAR2 1447 aa13.1□□□□□ -0.31
UBBP4-201ENST00000583708 CDCA8Q53HL2 280 aa13.09□□□□□ -0.31
UBBP4-201ENST00000583708 USP47Q96K76 1375 aa13.07□□□□□ -0.32
UBBP4-201ENST00000583708 EVC2Q86UK5 1308 aa13.07□□□□□ -0.32
UBBP4-201ENST00000583708 STRCP1A6NGW2 1772 aa13.07□□□□□ -0.32
UBBP4-201ENST00000583708 ST20-MTHFSA0A0A6YYL1 179 aa13.06□□□□□ -0.32
UBBP4-201ENST00000583708 WASLO00401 505 aaPredicted RBP13.06□□□□□ -0.32
UBBP4-201ENST00000583708 TMF1P82094 1093 aa13.05□□□□□ -0.32
UBBP4-201ENST00000583708 PLEKHH1Q9ULM0 1364 aa13.05□□□□□ -0.32
UBBP4-201ENST00000583708 SLAIN2Q9P270 581 aa13.04□□□□□ -0.32
UBBP4-201ENST00000583708 ANKARQ7Z5J8 1434 aa13.04□□□□□ -0.32
UBBP4-201ENST00000583708 TESK2Q96S53 571 aa13.03□□□□□ -0.32
UBBP4-201ENST00000583708 ADGRB2O60241 1585 aa13.03□□□□□ -0.32
UBBP4-201ENST00000583708 CDC42BPGQ6DT37 1551 aa13.03□□□□□ -0.32
UBBP4-201ENST00000583708 ARHGEF28Q8N1W1 1705 aaKnown RBP13.02□□□□□ -0.32
UBBP4-201ENST00000583708 SAFB2Q14151 953 aaKnown RBP eCLIP13.02□□□□□ -0.33
UBBP4-201ENST00000583708 CDK19Q9BWU1 502 aa13.02□□□□□ -0.33
UBBP4-201ENST00000583708 CCDC61Q9Y6R9 512 aa13.02□□□□□ -0.33
UBBP4-201ENST00000583708 MINK1Q8N4C8 1332 aaPredicted RBP13.02□□□□□ -0.33
UBBP4-201ENST00000583708 UBAP1LF5GYI3 381 aa13.01□□□□□ -0.33
UBBP4-201ENST00000583708 HSPA5P11021 654 aaKnown RBP13.01□□□□□ -0.33
UBBP4-201ENST00000583708 ATAD2Q6PL18 1390 aa13□□□□□ -0.33
UBBP4-201ENST00000583708 RBM33Q96EV2 1170 aaKnown RBP13□□□□□ -0.33
UBBP4-201ENST00000583708 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.99□□□□□ -0.33
UBBP4-201ENST00000583708 NINLQ9Y2I6 1382 aa12.99□□□□□ -0.33
UBBP4-201ENST00000583708 SRPK2P78362 688 aaKnown RBP12.99□□□□□ -0.33
UBBP4-201ENST00000583708 NUDT16Q96DE0 195 aaKnown RBP12.99□□□□□ -0.33
UBBP4-201ENST00000583708 MST1RQ04912 1400 aa12.98□□□□□ -0.33
UBBP4-201ENST00000583708 PLEKHG3A1L390 1219 aa12.98□□□□□ -0.33
UBBP4-201ENST00000583708 HIRIP3Q9BW71 556 aaPredicted RBP12.98□□□□□ -0.33
UBBP4-201ENST00000583708 C1orf167Q5SNV9 1468 aa12.97□□□□□ -0.33
UBBP4-201ENST00000583708 XIRP1Q702N8 1843 aaKnown RBP12.97□□□□□ -0.33
UBBP4-201ENST00000583708 BRD4O60885 1362 aaPredicted RBP12.97□□□□□ -0.33
UBBP4-201ENST00000583708 FBXO41Q8TF61 875 aa12.97□□□□□ -0.33
UBBP4-201ENST00000583708 ZNF692Q9BU19 519 aaPredicted RBP12.97□□□□□ -0.33
UBBP4-201ENST00000583708 TULP4Q9NRJ4 1543 aa12.97□□□□□ -0.33
UBBP4-201ENST00000583708 NALCNQ8IZF0 1738 aa12.96□□□□□ -0.34
UBBP4-201ENST00000583708 QRICH2Q9H0J4 1663 aa12.96□□□□□ -0.34
UBBP4-201ENST00000583708 ESCO1Q5FWF5 840 aa12.95□□□□□ -0.34
UBBP4-201ENST00000583708 PHF8Q9UPP1 1060 aa12.95□□□□□ -0.34
UBBP4-201ENST00000583708 NPHP3Q7Z494 1330 aa12.94□□□□□ -0.34
UBBP4-201ENST00000583708 PSME1Q06323 249 aa12.94□□□□□ -0.34
UBBP4-201ENST00000583708 BRINP3Q76B58 766 aa12.94□□□□□ -0.34
UBBP4-201ENST00000583708 FMN2Q9NZ56 1722 aa12.93□□□□□ -0.34
UBBP4-201ENST00000583708 CABP2Q9NPB3 220 aa12.93□□□□□ -0.34
UBBP4-201ENST00000583708 TERF2IPQ9NYB0 399 aa12.93□□□□□ -0.34
UBBP4-201ENST00000583708 PRR36Q9H6K5 1346 aa12.92□□□□□ -0.34
UBBP4-201ENST00000583708 ATP7BP35670 1465 aa12.91□□□□□ -0.34
UBBP4-201ENST00000583708 NGDNQ8NEJ9 315 aaKnown RBP12.91□□□□□ -0.34
UBBP4-201ENST00000583708 ORAI2Q96SN7 254 aa12.91□□□□□ -0.34
UBBP4-201ENST00000583708 CABP1Q9NZU7 370 aa12.91□□□□□ -0.34
UBBP4-201ENST00000583708 POLR3AO14802 1390 aaPredicted RBP12.91□□□□□ -0.34
UBBP4-201ENST00000583708 HDGFL2Q7Z4V5 671 aaPredicted RBP12.9□□□□□ -0.34
UBBP4-201ENST00000583708 DISP3Q9P2K9 1392 aa12.9□□□□□ -0.34
UBBP4-201ENST00000583708 PPIP5K1Q6PFW1 1433 aa12.89□□□□□ -0.35
UBBP4-201ENST00000583708 NUTM2FA1L443 756 aa12.89□□□□□ -0.35
UBBP4-201ENST00000583708 PIP4K2BP78356 416 aa12.89□□□□□ -0.35
UBBP4-201ENST00000583708 LRRC59Q96AG4 307 aaKnown RBP12.89□□□□□ -0.35
UBBP4-201ENST00000583708 ACEP12821 1306 aa12.88□□□□□ -0.35
UBBP4-201ENST00000583708 SOS2Q07890 1332 aaPredicted RBP12.88□□□□□ -0.35
UBBP4-201ENST00000583708 SBNO1A3KN83 1393 aa12.88□□□□□ -0.35
UBBP4-201ENST00000583708 KIF1AQ12756 1690 aa12.88□□□□□ -0.35
UBBP4-201ENST00000583708 FOXO3O43524 673 aa12.87□□□□□ -0.35
UBBP4-201ENST00000583708 KRT28Q7Z3Y7 464 aa12.87□□□□□ -0.35
UBBP4-201ENST00000583708 TMC1Q8TDI8 760 aa12.87□□□□□ -0.35
UBBP4-201ENST00000583708 ITSN1Q15811 1721 aa12.87□□□□□ -0.35
UBBP4-201ENST00000583708 CPSF1Q10570 1443 aaKnown RBP12.87□□□□□ -0.35
UBBP4-201ENST00000583708 SCAF1Q9H7N4 1312 aaKnown RBP12.87□□□□□ -0.35
UBBP4-201ENST00000583708 CCDC7Q96M83 1385 aa12.86□□□□□ -0.35
UBBP4-201ENST00000583708 PMFBP1Q8TBY8 1022 aa12.86□□□□□ -0.35
UBBP4-201ENST00000583708 SLC12A5Q9H2X9 1139 aa12.86□□□□□ -0.35
UBBP4-201ENST00000583708 KIF7Q2M1P5 1343 aa12.86□□□□□ -0.35
UBBP4-201ENST00000583708 TTC21AQ8NDW8 1320 aa12.86□□□□□ -0.35
UBBP4-201ENST00000583708 AHDC1Q5TGY3 1603 aaPredicted RBP12.85□□□□□ -0.35
UBBP4-201ENST00000583708 ANKRD36BQ8N2N9 1353 aa12.85□□□□□ -0.35
UBBP4-201ENST00000583708 USP32Q8NFA0 1604 aa12.85□□□□□ -0.35
UBBP4-201ENST00000583708 ZNF316A6NFI3 1004 aaPredicted RBP12.84□□□□□ -0.35
UBBP4-201ENST00000583708 C11orf95C9JLR9 678 aaPredicted RBP12.84□□□□□ -0.35
UBBP4-201ENST00000583708 ROBO1Q9Y6N7 1651 aa12.83□□□□□ -0.35
UBBP4-201ENST00000583708 ARHGEF10O15013 1369 aa12.83□□□□□ -0.36
UBBP4-201ENST00000583708 WASHC2AQ641Q2 1341 aa12.83□□□□□ -0.36
UBBP4-201ENST00000583708 TOPAZ1Q8N9V7 1692 aa12.83□□□□□ -0.36
UBBP4-201ENST00000583708 KTN1Q86UP2 1357 aaKnown RBP12.82□□□□□ -0.36
UBBP4-201ENST00000583708 USP6P35125 1406 aa12.82□□□□□ -0.36
UBBP4-201ENST00000583708 EDC4Q6P2E9 1401 aaKnown RBP12.82□□□□□ -0.36
UBBP4-201ENST00000583708 SPATA31A3Q5VYP0 1347 aa12.82□□□□□ -0.36
UBBP4-201ENST00000583708 JCADQ9P266 1359 aa12.81□□□□□ -0.36
UBBP4-201ENST00000583708 NHSL1Q5SYE7 1610 aa12.8□□□□□ -0.36
UBBP4-201ENST00000583708 SSH2Q76I76 1423 aa12.8□□□□□ -0.36
UBBP4-201ENST00000583708 PXDNQ92626 1479 aa12.8□□□□□ -0.36
UBBP4-201ENST00000583708 HSPA1LP34931 641 aa12.8□□□□□ -0.36
UBBP4-201ENST00000583708 NLRP13Q86W25 1043 aa12.8□□□□□ -0.36
UBBP4-201ENST00000583708 POLR3GLQ9BT43 218 aa12.8□□□□□ -0.36
UBBP4-201ENST00000583708 PANK3Q9H999 370 aa12.8□□□□□ -0.36
UBBP4-201ENST00000583708 TTC21BQ7Z4L5 1316 aa12.8□□□□□ -0.36
UBBP4-201ENST00000583708 KNSTRNQ9Y448 316 aa12.79□□□□□ -0.36
UBBP4-201ENST00000583708 CGNL1Q0VF96 1302 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms