RNA–Protein interactions for RNA: ENST00000583705.1

MSI2-217, Transcript of musashi RNA binding protein 2, human

Gene MSI2, Length 7,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-217	ENST00000583705	XBP1	P17861	261 aa		13.62	□□□□□ -0.23
MSI2-217	ENST00000583705	CDR1	P51861	262 aa		13.62	□□□□□ -0.23
MSI2-217	ENST00000583705	RIPK4	P57078	832 aa		13.62	□□□□□ -0.23
MSI2-217	ENST00000583705	CNNM1	Q9NRU3	951 aa		13.62	□□□□□ -0.23
MSI2-217	ENST00000583705	ANKRD30A	Q9BXX3	1397 aa		13.61	□□□□□ -0.23
MSI2-217	ENST00000583705	PIBF1	Q8WXW3	757 aa		13.61	□□□□□ -0.23
MSI2-217	ENST00000583705	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.61	□□□□□ -0.23
MSI2-217	ENST00000583705	IFT57	Q9NWB7	429 aa		13.61	□□□□□ -0.23
MSI2-217	ENST00000583705	BICDL1	Q6ZP65	573 aa		13.61	□□□□□ -0.23
MSI2-217	ENST00000583705	WASHC2A	Q641Q2	1341 aa		13.61	□□□□□ -0.23
MSI2-217	ENST00000583705	EVC2	Q86UK5	1308 aa		13.61	□□□□□ -0.23
MSI2-217	ENST00000583705	CEBPZ	Q03701	1054 aa	Known RBP	13.61	□□□□□ -0.23
MSI2-217	ENST00000583705	CGNL1	Q0VF96	1302 aa		13.61	□□□□□ -0.23
MSI2-217	ENST00000583705	CEP164	Q9UPV0	1460 aa		13.61	□□□□□ -0.23
MSI2-217	ENST00000583705	GRM1	Q13255	1194 aa		13.6	□□□□□ -0.23
MSI2-217	ENST00000583705	SEPT11	Q9NVA2	429 aa	Known RBP	13.6	□□□□□ -0.23
MSI2-217	ENST00000583705	TEX35	Q5T0J7	233 aa		13.6	□□□□□ -0.23
MSI2-217	ENST00000583705	TTLL12	Q14166	644 aa	Predicted RBP	13.6	□□□□□ -0.23
MSI2-217	ENST00000583705	SEPT7	Q16181	437 aa	Known RBP	13.6	□□□□□ -0.23
MSI2-217	ENST00000583705	ZKSCAN2	Q63HK3	967 aa		13.6	□□□□□ -0.23
MSI2-217	ENST00000583705	CA8	P35219	290 aa		13.6	□□□□□ -0.23
MSI2-217	ENST00000583705	ESCO1	Q5FWF5	840 aa		13.6	□□□□□ -0.23
MSI2-217	ENST00000583705	PSMD1	Q99460	953 aa		13.59	□□□□□ -0.23
MSI2-217	ENST00000583705	SETD5	Q9C0A6	1442 aa		13.59	□□□□□ -0.23
MSI2-217	ENST00000583705	MNS1	Q8NEH6	495 aa		13.59	□□□□□ -0.23
MSI2-217	ENST00000583705	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.59	□□□□□ -0.23
MSI2-217	ENST00000583705	FMNL2	Q96PY5	1086 aa		13.59	□□□□□ -0.23
MSI2-217	ENST00000583705	TBC1D2B	Q9UPU7	963 aa		13.59	□□□□□ -0.23
MSI2-217	ENST00000583705	CCDC73	Q6ZRK6	1079 aa		13.59	□□□□□ -0.23
MSI2-217	ENST00000583705	MAGEC2	Q9UBF1	373 aa	Predicted RBP	13.58	□□□□□ -0.24
MSI2-217	ENST00000583705	ENOX2	Q16206	610 aa	Known RBP	13.58	□□□□□ -0.24
MSI2-217	ENST00000583705	TTC39A	Q5SRH9	613 aa		13.58	□□□□□ -0.24
MSI2-217	ENST00000583705	TTC16	Q8NEE8	873 aa		13.58	□□□□□ -0.24
MSI2-217	ENST00000583705	SLC3A2	P08195	630 aa	Known RBP	13.57	□□□□□ -0.24
MSI2-217	ENST00000583705	WDR78	Q5VTH9	848 aa		13.57	□□□□□ -0.24
MSI2-217	ENST00000583705	DIAPH1	O60610	1272 aa	Known RBP	13.57	□□□□□ -0.24
MSI2-217	ENST00000583705	TANGO6	Q9C0B7	1094 aa		13.57	□□□□□ -0.24
MSI2-217	ENST00000583705	HSP90AB4P	Q58FF6	505 aa		13.57	□□□□□ -0.24
MSI2-217	ENST00000583705	REC8	O95072	547 aa		13.57	□□□□□ -0.24
MSI2-217	ENST00000583705	FAM69C	Q0P6D2	419 aa		13.57	□□□□□ -0.24
MSI2-217	ENST00000583705	CRBN	Q96SW2	442 aa		13.57	□□□□□ -0.24
MSI2-217	ENST00000583705	SART3	Q15020	963 aa	Known RBP	13.56	□□□□□ -0.24
MSI2-217	ENST00000583705	SSR1	P43307	286 aa	Known RBP	13.56	□□□□□ -0.24
MSI2-217	ENST00000583705	SCLT1	Q96NL6	688 aa		13.56	□□□□□ -0.24
MSI2-217	ENST00000583705	ABTB2	Q8N961	1025 aa		13.56	□□□□□ -0.24
MSI2-217	ENST00000583705	FSD1	Q9BTV5	496 aa		13.56	□□□□□ -0.24
MSI2-217	ENST00000583705	FAM13B	Q9NYF5	915 aa		13.56	□□□□□ -0.24
MSI2-217	ENST00000583705	SDF4	Q9BRK5	362 aa		13.55	□□□□□ -0.24
MSI2-217	ENST00000583705	SMC2	O95347	1197 aa		13.55	□□□□□ -0.24
MSI2-217	ENST00000583705	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.55	□□□□□ -0.24
MSI2-217	ENST00000583705	ERC2	O15083	957 aa		13.55	□□□□□ -0.24
MSI2-217	ENST00000583705	IPO9	Q96P70	1041 aa	Known RBP	13.55	□□□□□ -0.24
MSI2-217	ENST00000583705	SSB	P05455	408 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
MSI2-217	ENST00000583705	MYO6	Q9UM54	1294 aa		13.54	□□□□□ -0.24
MSI2-217	ENST00000583705		H0YHG0	523 aa		13.54	□□□□□ -0.24
MSI2-217	ENST00000583705	ZRSR2	Q15696	482 aa	Known RBP	13.54	□□□□□ -0.24
MSI2-217	ENST00000583705	CCDC191	Q8NCU4	936 aa		13.54	□□□□□ -0.24
MSI2-217	ENST00000583705	VGF	O15240	615 aa	Predicted RBP	13.54	□□□□□ -0.24
MSI2-217	ENST00000583705	ECM2	O94769	699 aa	Predicted RBP	13.54	□□□□□ -0.24
MSI2-217	ENST00000583705	USP5	P45974	858 aa		13.54	□□□□□ -0.24
MSI2-217	ENST00000583705	ZNF76	P36508	570 aa		13.53	□□□□□ -0.24
MSI2-217	ENST00000583705	NUP133	Q8WUM0	1156 aa		13.53	□□□□□ -0.24
MSI2-217	ENST00000583705	LNPK	Q9C0E8	428 aa		13.53	□□□□□ -0.24
MSI2-217	ENST00000583705	SIL1	Q9H173	461 aa		13.53	□□□□□ -0.24
MSI2-217	ENST00000583705	MYL6B	P14649	208 aa		13.53	□□□□□ -0.24
MSI2-217	ENST00000583705	NLRP6	P59044	892 aa		13.53	□□□□□ -0.24
MSI2-217	ENST00000583705	HSP90B2P	Q58FF3	399 aa		13.53	□□□□□ -0.24
MSI2-217	ENST00000583705	UBTFL1	P0CB47	393 aa	Predicted RBP	13.53	□□□□□ -0.24
MSI2-217	ENST00000583705	CENPH	Q9H3R5	247 aa		13.53	□□□□□ -0.24
MSI2-217	ENST00000583705	CCER2	I3L3R5	266 aa		13.53	□□□□□ -0.24
MSI2-217	ENST00000583705	APAF1	O14727	1248 aa		13.53	□□□□□ -0.24
MSI2-217	ENST00000583705	TOM1L2	Q6ZVM7	507 aa		13.53	□□□□□ -0.24
MSI2-217	ENST00000583705	TAX1BP1	Q86VP1	789 aa		13.53	□□□□□ -0.24
MSI2-217	ENST00000583705	TDRD9	Q8NDG6	1382 aa	Known RBP	13.53	□□□□□ -0.24
MSI2-217	ENST00000583705	ST20-MTHFS	A0A0A6YYL1	179 aa		13.52	□□□□□ -0.24
MSI2-217	ENST00000583705	KAT6B	Q8WYB5	2073 aa		13.52	□□□□□ -0.24
MSI2-217	ENST00000583705	MAP4K4	O95819	1239 aa	Predicted RBP	13.52	□□□□□ -0.24
MSI2-217	ENST00000583705	TXLNA	P40222	546 aa		13.52	□□□□□ -0.24
MSI2-217	ENST00000583705	STK3	Q13188	491 aa		13.52	□□□□□ -0.25
MSI2-217	ENST00000583705	NLRP13	Q86W25	1043 aa		13.52	□□□□□ -0.25
MSI2-217	ENST00000583705	DCTN1	Q14203	1278 aa		13.51	□□□□□ -0.25
MSI2-217	ENST00000583705	L3MBTL2	Q969R5	705 aa		13.51	□□□□□ -0.25
MSI2-217	ENST00000583705	KANK4	Q5T7N3	995 aa	Predicted RBP	13.5	□□□□□ -0.25
MSI2-217	ENST00000583705	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.5	□□□□□ -0.25
MSI2-217	ENST00000583705	PROSER2	Q86WR7	435 aa	Predicted RBP	13.5	□□□□□ -0.25
MSI2-217	ENST00000583705	PDE3B	Q13370	1112 aa		13.5	□□□□□ -0.25
MSI2-217	ENST00000583705	DEF6	Q9H4E7	631 aa		13.5	□□□□□ -0.25
MSI2-217	ENST00000583705	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.5	□□□□□ -0.25
MSI2-217	ENST00000583705	ACBD3	Q9H3P7	528 aa		13.5	□□□□□ -0.25
MSI2-217	ENST00000583705	GNL3L	Q9NVN8	582 aa	Known RBP	13.5	□□□□□ -0.25
MSI2-217	ENST00000583705	TSPYL1	Q9H0U9	437 aa		13.49	□□□□□ -0.25
MSI2-217	ENST00000583705	HMGN5	P82970	282 aa	Known RBP	13.49	□□□□□ -0.25
MSI2-217	ENST00000583705	INTS3	Q68E01	1043 aa	Known RBP	13.49	□□□□□ -0.25
MSI2-217	ENST00000583705	CABP4	P57796	275 aa		13.49	□□□□□ -0.25
MSI2-217	ENST00000583705	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.49	□□□□□ -0.25
MSI2-217	ENST00000583705	CABP2	Q9NPB3	220 aa		13.49	□□□□□ -0.25
MSI2-217	ENST00000583705	NAT10	Q9H0A0	1025 aa	Known RBP	13.49	□□□□□ -0.25
MSI2-217	ENST00000583705	MYO15B	Q96JP2	1530 aa		13.49	□□□□□ -0.25
MSI2-217	ENST00000583705	CCDC181	Q5TID7	509 aa		13.48	□□□□□ -0.25
MSI2-217	ENST00000583705	CNTROB	Q8N137	903 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms