RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 SOS2Q07890 1332 aaPredicted RBP17.25■□□□□ 0.35
GGA3-217ENST00000583667 MYO5BQ9ULV0 1848 aa17.25■□□□□ 0.35
GGA3-217ENST00000583667 NUP155O75694 1391 aa17.25■□□□□ 0.35
GGA3-217ENST00000583667 UNC13BO14795 1591 aa17.24■□□□□ 0.35
GGA3-217ENST00000583667 SIN3AQ96ST3 1273 aa17.24■□□□□ 0.35
GGA3-217ENST00000583667 TRPM2O94759 1503 aa17.24■□□□□ 0.35
GGA3-217ENST00000583667 TMEM131LA2VDJ0 1609 aa17.24■□□□□ 0.35
GGA3-217ENST00000583667 CHGAP10645 457 aaKnown RBP17.22■□□□□ 0.35
GGA3-217ENST00000583667 ORAI2Q96SN7 254 aa17.19■□□□□ 0.34
GGA3-217ENST00000583667 C1orf167Q5SNV9 1468 aa17.18■□□□□ 0.34
GGA3-217ENST00000583667 RALGAPBQ86X10 1494 aa17.18■□□□□ 0.34
GGA3-217ENST00000583667 LAMC1P11047 1609 aa17.18■□□□□ 0.34
GGA3-217ENST00000583667 IQGAP3Q86VI3 1631 aa17.18■□□□□ 0.34
GGA3-217ENST00000583667 ADGRL3Q9HAR2 1447 aa17.17■□□□□ 0.34
GGA3-217ENST00000583667 MYOM2P54296 1465 aa17.17■□□□□ 0.34
GGA3-217ENST00000583667 RPRD2Q5VT52 1461 aaKnown RBP17.17■□□□□ 0.34
GGA3-217ENST00000583667 BAG6P46379 1132 aa17.16■□□□□ 0.34
GGA3-217ENST00000583667 NEUROD1Q13562 356 aa17.16■□□□□ 0.34
GGA3-217ENST00000583667 R3HDM1Q15032 1099 aaKnown RBP17.16■□□□□ 0.34
GGA3-217ENST00000583667 UNC5CLQ8IV45 518 aa17.16■□□□□ 0.34
GGA3-217ENST00000583667 SEPT12Q8IYM1 358 aa17.16■□□□□ 0.34
GGA3-217ENST00000583667 XRN1Q8IZH2 1706 aaKnown RBP17.16■□□□□ 0.34
GGA3-217ENST00000583667 GLI3P10071 1580 aa17.15■□□□□ 0.34
GGA3-217ENST00000583667 COL22A1Q8NFW1 1626 aaPredicted RBP17.15■□□□□ 0.34
GGA3-217ENST00000583667 BRWD3Q6RI45 1802 aa17.14■□□□□ 0.33
GGA3-217ENST00000583667 TONSLQ96HA7 1378 aa17.14■□□□□ 0.33
GGA3-217ENST00000583667 METP08581 1390 aa17.13■□□□□ 0.33
GGA3-217ENST00000583667 SPHKAPQ2M3C7 1700 aa17.12■□□□□ 0.33
GGA3-217ENST00000583667 ONECUT3O60422 494 aaPredicted RBP17.11■□□□□ 0.33
GGA3-217ENST00000583667 EN1Q05925 392 aaPredicted RBP17.11■□□□□ 0.33
GGA3-217ENST00000583667 KRT27Q7Z3Y8 459 aa17.11■□□□□ 0.33
GGA3-217ENST00000583667 SLIT2O94813 1529 aa17.09■□□□□ 0.33
GGA3-217ENST00000583667 NALCNQ8IZF0 1738 aa17.08■□□□□ 0.32
GGA3-217ENST00000583667 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.08■□□□□ 0.32
GGA3-217ENST00000583667 ZNF316A6NFI3 1004 aaPredicted RBP17.08■□□□□ 0.32
GGA3-217ENST00000583667 MARF1Q9Y4F3 1742 aaKnown RBP17.07■□□□□ 0.32
GGA3-217ENST00000583667 NRXN3Q9Y4C0 1643 aa17.07■□□□□ 0.32
GGA3-217ENST00000583667 SENP3-EIF4A1A0A087X0R7 540 aa17.05■□□□□ 0.32
GGA3-217ENST00000583667 VPS72Q15906 364 aa17.05■□□□□ 0.32
GGA3-217ENST00000583667 L3MBTL2Q969R5 705 aa17.04■□□□□ 0.32
GGA3-217ENST00000583667 NPHP3Q7Z494 1330 aa17.03■□□□□ 0.32
GGA3-217ENST00000583667 XPCQ01831 940 aaPredicted RBP17.03■□□□□ 0.32
GGA3-217ENST00000583667 PXDNQ92626 1479 aa17.02■□□□□ 0.32
GGA3-217ENST00000583667 DCAF8L1A6NGE4 600 aa17.01■□□□□ 0.31
GGA3-217ENST00000583667 FOXO3O43524 673 aa17.01■□□□□ 0.31
GGA3-217ENST00000583667 ESCO1Q5FWF5 840 aa17.01■□□□□ 0.31
GGA3-217ENST00000583667 EZH2Q15910 746 aaKnown RBP17■□□□□ 0.31
GGA3-217ENST00000583667 ZNF784Q8NCA9 323 aaPredicted RBP17■□□□□ 0.31
GGA3-217ENST00000583667 CCDC9Q9Y3X0 531 aaKnown RBP17■□□□□ 0.31
GGA3-217ENST00000583667 CCDC144AA2RUR9 1427 aa16.98■□□□□ 0.31
GGA3-217ENST00000583667 E9PCH4 1651 aa16.97■□□□□ 0.31
GGA3-217ENST00000583667 C1QTNF8P60827 252 aa16.96■□□□□ 0.31
GGA3-217ENST00000583667 FAM182BQ5T319 152 aa16.96■□□□□ 0.31
GGA3-217ENST00000583667 ROBO2Q9HCK4 1378 aa16.96■□□□□ 0.31
GGA3-217ENST00000583667 DISP2A7MBM2 1401 aa16.96■□□□□ 0.3
GGA3-217ENST00000583667 A0A0G2JS52 829 aa16.95■□□□□ 0.3
GGA3-217ENST00000583667 MYT1Q01538 1121 aa16.95■□□□□ 0.3
GGA3-217ENST00000583667 STAC3Q96MF2 364 aa16.95■□□□□ 0.3
GGA3-217ENST00000583667 CAMKK2Q96RR4 588 aa16.95■□□□□ 0.3
GGA3-217ENST00000583667 FAM98CQ17RN3 349 aaKnown RBP16.93■□□□□ 0.3
GGA3-217ENST00000583667 ZNF326Q5BKZ1 582 aaKnown RBP16.93■□□□□ 0.3
GGA3-217ENST00000583667 PPP1R1BQ9UD71 204 aaPredicted RBP16.93■□□□□ 0.3
GGA3-217ENST00000583667 SPATA31A3Q5VYP0 1347 aa16.93■□□□□ 0.3
GGA3-217ENST00000583667 LRPPRCP42704 1394 aaKnown RBP16.91■□□□□ 0.3
GGA3-217ENST00000583667 RGPD1P0DJD0 1748 aa16.91■□□□□ 0.3
GGA3-217ENST00000583667 NINLQ9Y2I6 1382 aa16.9■□□□□ 0.3
GGA3-217ENST00000583667 SPATA31E1Q6ZUB1 1445 aa16.9■□□□□ 0.3
GGA3-217ENST00000583667 USP32Q8NFA0 1604 aa16.9■□□□□ 0.3
GGA3-217ENST00000583667 SPON1Q9HCB6 807 aa16.9■□□□□ 0.3
GGA3-217ENST00000583667 NBPF8Q3BBV2 869 aa16.89■□□□□ 0.29
GGA3-217ENST00000583667 CABLES1Q8TDN4 633 aa16.89■□□□□ 0.29
GGA3-217ENST00000583667 KCNQ2O43526 872 aa16.88■□□□□ 0.29
GGA3-217ENST00000583667 HAP1P54257 671 aaPredicted RBP16.88■□□□□ 0.29
GGA3-217ENST00000583667 FAM83GA6ND36 823 aa16.87■□□□□ 0.29
GGA3-217ENST00000583667 TNS1Q9HBL0 1735 aaKnown RBP16.85■□□□□ 0.29
GGA3-217ENST00000583667 NWD2Q9ULI1 1742 aa16.85■□□□□ 0.29
GGA3-217ENST00000583667 NUTM2FA1L443 756 aa16.85■□□□□ 0.29
GGA3-217ENST00000583667 TRIM37O94972 964 aa16.85■□□□□ 0.29
GGA3-217ENST00000583667 APBA3O96018 575 aa16.85■□□□□ 0.29
GGA3-217ENST00000583667 KRT28Q7Z3Y7 464 aa16.85■□□□□ 0.29
GGA3-217ENST00000583667 CAMTA1Q9Y6Y1 1673 aa16.85■□□□□ 0.29
GGA3-217ENST00000583667 UTRNP46939 3433 aa16.84■□□□□ 0.29
GGA3-217ENST00000583667 PLEKHG5O94827 1062 aa16.84■□□□□ 0.29
GGA3-217ENST00000583667 DIEXFQ68CQ4 756 aaKnown RBP16.84■□□□□ 0.29
GGA3-217ENST00000583667 PARD3Q8TEW0 1356 aa16.84■□□□□ 0.29
GGA3-217ENST00000583667 PRAG1Q86YV5 1406 aa16.84■□□□□ 0.29
GGA3-217ENST00000583667 PLCH1Q4KWH8 1693 aa16.84■□□□□ 0.29
GGA3-217ENST00000583667 NBPF14Q5TI25 921 aa16.83■□□□□ 0.28
GGA3-217ENST00000583667 DCAF11Q8TEB1 546 aa16.83■□□□□ 0.28
GGA3-217ENST00000583667 CLTCL1P53675 1640 aa16.82■□□□□ 0.28
GGA3-217ENST00000583667 CEP350Q5VT06 3117 aa16.82■□□□□ 0.28
GGA3-217ENST00000583667 EIF4G2P78344 907 aaKnown RBP eCLIP16.81■□□□□ 0.28
GGA3-217ENST00000583667 CDC42BPGQ6DT37 1551 aa16.81■□□□□ 0.28
GGA3-217ENST00000583667 NEXMIFQ5QGS0 1516 aa16.8■□□□□ 0.28
GGA3-217ENST00000583667 FAM196AQ6ZSG2 479 aa16.8■□□□□ 0.28
GGA3-217ENST00000583667 BTG4Q9NY30 223 aa16.8■□□□□ 0.28
GGA3-217ENST00000583667 SPATA31A5Q5VU36 1347 aa16.78■□□□□ 0.28
GGA3-217ENST00000583667 SPATA31A7Q8IWB4 1347 aa16.78■□□□□ 0.28
GGA3-217ENST00000583667 GPRASP1Q5JY77 1395 aa16.77■□□□□ 0.28
GGA3-217ENST00000583667 ADGRB2O60241 1585 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms