RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 BAG6P46379 1132 aa14.58□□□□□ -0.08
MKS1-212ENST00000583577 R3HDM1Q15032 1099 aaKnown RBP14.58□□□□□ -0.08
MKS1-212ENST00000583577 ABCC5O15440 1437 aa14.58□□□□□ -0.08
MKS1-212ENST00000583577 ORAI2Q96SN7 254 aa14.57□□□□□ -0.08
MKS1-212ENST00000583577 SEPT12Q8IYM1 358 aa14.56□□□□□ -0.08
MKS1-212ENST00000583577 CHIC2Q9UKJ5 165 aa14.56□□□□□ -0.08
MKS1-212ENST00000583577 MYOM2P54296 1465 aa14.56□□□□□ -0.08
MKS1-212ENST00000583577 RPRD2Q5VT52 1461 aaKnown RBP14.56□□□□□ -0.08
MKS1-212ENST00000583577 RRBP1Q9P2E9 1410 aaKnown RBP14.55□□□□□ -0.08
MKS1-212ENST00000583577 UNC5CLQ8IV45 518 aa14.54□□□□□ -0.08
MKS1-212ENST00000583577 NRXN3Q9Y4C0 1643 aa14.54□□□□□ -0.08
MKS1-212ENST00000583577 SENP3-EIF4A1A0A087X0R7 540 aa14.53□□□□□ -0.08
MKS1-212ENST00000583577 ANKRD30AQ9BXX3 1397 aa14.52□□□□□ -0.08
MKS1-212ENST00000583577 EN1Q05925 392 aaPredicted RBP14.52□□□□□ -0.09
MKS1-212ENST00000583577 KRT27Q7Z3Y8 459 aa14.52□□□□□ -0.09
MKS1-212ENST00000583577 CCER1Q8TC90 406 aaPredicted RBP14.52□□□□□ -0.09
MKS1-212ENST00000583577 CEP350Q5VT06 3117 aa14.51□□□□□ -0.09
MKS1-212ENST00000583577 METP08581 1390 aa14.51□□□□□ -0.09
MKS1-212ENST00000583577 CCDC9Q9Y3X0 531 aaKnown RBP14.5□□□□□ -0.09
MKS1-212ENST00000583577 ADGRL2O95490 1459 aa14.5□□□□□ -0.09
MKS1-212ENST00000583577 UTRNP46939 3433 aa14.5□□□□□ -0.09
MKS1-212ENST00000583577 RGPD1P0DJD0 1748 aa14.49□□□□□ -0.09
MKS1-212ENST00000583577 A0A0G2JS52 829 aa14.49□□□□□ -0.09
MKS1-212ENST00000583577 DCAF8L1A6NGE4 600 aa14.49□□□□□ -0.09
MKS1-212ENST00000583577 ITGAEP38570 1179 aa14.49□□□□□ -0.09
MKS1-212ENST00000583577 MYT1Q01538 1121 aa14.49□□□□□ -0.09
MKS1-212ENST00000583577 XPCQ01831 940 aaPredicted RBP14.49□□□□□ -0.09
MKS1-212ENST00000583577 SLIT2O94813 1529 aa14.48□□□□□ -0.09
MKS1-212ENST00000583577 E9PCH4 1651 aa14.47□□□□□ -0.09
MKS1-212ENST00000583577 NPHP3Q7Z494 1330 aa14.45□□□□□ -0.1
MKS1-212ENST00000583577 ROCK1Q13464 1354 aa14.45□□□□□ -0.1
MKS1-212ENST00000583577 VPS72Q15906 364 aa14.44□□□□□ -0.1
MKS1-212ENST00000583577 ESCO1Q5FWF5 840 aa14.44□□□□□ -0.1
MKS1-212ENST00000583577 PPP1R1BQ9UD71 204 aaPredicted RBP14.44□□□□□ -0.1
MKS1-212ENST00000583577 PLCH1Q4KWH8 1693 aa14.44□□□□□ -0.1
MKS1-212ENST00000583577 CAMTA1Q9Y6Y1 1673 aa14.44□□□□□ -0.1
MKS1-212ENST00000583577 PXDNQ92626 1479 aa14.44□□□□□ -0.1
MKS1-212ENST00000583577 IQGAP3Q86VI3 1631 aa14.42□□□□□ -0.1
MKS1-212ENST00000583577 USP32Q8NFA0 1604 aa14.42□□□□□ -0.1
MKS1-212ENST00000583577 TNS1Q9HBL0 1735 aaKnown RBP14.42□□□□□ -0.1
MKS1-212ENST00000583577 FOXO3O43524 673 aa14.42□□□□□ -0.1
MKS1-212ENST00000583577 ONECUT3O60422 494 aaPredicted RBP14.42□□□□□ -0.1
MKS1-212ENST00000583577 PLEKHG5O94827 1062 aa14.42□□□□□ -0.1
MKS1-212ENST00000583577 EZH2Q15910 746 aaKnown RBP14.42□□□□□ -0.1
MKS1-212ENST00000583577 ZNF326Q5BKZ1 582 aaKnown RBP14.42□□□□□ -0.1
MKS1-212ENST00000583577 FAM182BQ5T319 152 aa14.42□□□□□ -0.1
MKS1-212ENST00000583577 ZNF784Q8NCA9 323 aaPredicted RBP14.42□□□□□ -0.1
MKS1-212ENST00000583577 NWD2Q9ULI1 1742 aa14.41□□□□□ -0.1
MKS1-212ENST00000583577 ANKRD50Q9ULJ7 1429 aa14.41□□□□□ -0.1
MKS1-212ENST00000583577 HAP1P54257 671 aaPredicted RBP14.4□□□□□ -0.1
MKS1-212ENST00000583577 CHD4Q14839 1912 aa14.39□□□□□ -0.11
MKS1-212ENST00000583577 FAM98CQ17RN3 349 aaKnown RBP14.39□□□□□ -0.11
MKS1-212ENST00000583577 CLSPNQ9HAW4 1339 aa14.39□□□□□ -0.11
MKS1-212ENST00000583577 ROBO2Q9HCK4 1378 aa14.38□□□□□ -0.11
MKS1-212ENST00000583577 C1QTNF8P60827 252 aa14.38□□□□□ -0.11
MKS1-212ENST00000583577 NUTM2FA1L443 756 aa14.36□□□□□ -0.11
MKS1-212ENST00000583577 LRPPRCP42704 1394 aaKnown RBP14.35□□□□□ -0.11
MKS1-212ENST00000583577 DISP2A7MBM2 1401 aa14.35□□□□□ -0.11
MKS1-212ENST00000583577 CENPBP07199 599 aaPredicted RBP14.35□□□□□ -0.11
MKS1-212ENST00000583577 CABLES1Q8TDN4 633 aa14.35□□□□□ -0.11
MKS1-212ENST00000583577 NINLQ9Y2I6 1382 aa14.34□□□□□ -0.11
MKS1-212ENST00000583577 CAMKK2Q96RR4 588 aa14.34□□□□□ -0.11
MKS1-212ENST00000583577 SPON1Q9HCB6 807 aa14.34□□□□□ -0.11
MKS1-212ENST00000583577 SPATA31A3Q5VYP0 1347 aa14.34□□□□□ -0.11
MKS1-212ENST00000583577 HFM1A2PYH4 1435 aa14.33□□□□□ -0.11
MKS1-212ENST00000583577 NAIPQ13075 1403 aa14.33□□□□□ -0.11
MKS1-212ENST00000583577 ADGRB2O60241 1585 aa14.33□□□□□ -0.12
MKS1-212ENST00000583577 NUP188Q5SRE5 1749 aa14.32□□□□□ -0.12
MKS1-212ENST00000583577 TRIM37O94972 964 aa14.32□□□□□ -0.12
MKS1-212ENST00000583577 CDC42BPGQ6DT37 1551 aa14.31□□□□□ -0.12
MKS1-212ENST00000583577 RREB1Q92766 1687 aa14.31□□□□□ -0.12
MKS1-212ENST00000583577 KCNQ2O43526 872 aa14.31□□□□□ -0.12
MKS1-212ENST00000583577 APBA3O96018 575 aa14.31□□□□□ -0.12
MKS1-212ENST00000583577 NRAPQ86VF7 1730 aa14.31□□□□□ -0.12
MKS1-212ENST00000583577 ABCA3Q99758 1704 aa14.31□□□□□ -0.12
MKS1-212ENST00000583577 NEXMIFQ5QGS0 1516 aa14.31□□□□□ -0.12
MKS1-212ENST00000583577 NBPF8Q3BBV2 869 aa14.3□□□□□ -0.12
MKS1-212ENST00000583577 NBPF14Q5TI25 921 aa14.3□□□□□ -0.12
MKS1-212ENST00000583577 DIEXFQ68CQ4 756 aaKnown RBP14.3□□□□□ -0.12
MKS1-212ENST00000583577 LMOD2Q6P5Q4 547 aa14.29□□□□□ -0.12
MKS1-212ENST00000583577 KRT28Q7Z3Y7 464 aa14.29□□□□□ -0.12
MKS1-212ENST00000583577 RGPD8O14715 1765 aaPredicted RBP14.29□□□□□ -0.12
MKS1-212ENST00000583577 FAM83GA6ND36 823 aa14.28□□□□□ -0.12
MKS1-212ENST00000583577 KIF1BO60333 1816 aa14.28□□□□□ -0.12
MKS1-212ENST00000583577 ZNF316A6NFI3 1004 aaPredicted RBP14.27□□□□□ -0.13
MKS1-212ENST00000583577 KIF1AQ12756 1690 aa14.26□□□□□ -0.13
MKS1-212ENST00000583577 CCDC144AA2RUR9 1427 aa14.26□□□□□ -0.13
MKS1-212ENST00000583577 NUP155O75694 1391 aa14.26□□□□□ -0.13
MKS1-212ENST00000583577 PARD3Q8TEW0 1356 aa14.26□□□□□ -0.13
MKS1-212ENST00000583577 ACIN1Q9UKV3 1341 aaKnown RBP14.26□□□□□ -0.13
MKS1-212ENST00000583577 BTG4Q9NY30 223 aa14.26□□□□□ -0.13
MKS1-212ENST00000583577 THSD7AQ9UPZ6 1657 aa14.25□□□□□ -0.13
MKS1-212ENST00000583577 TNS3Q68CZ2 1445 aa14.24□□□□□ -0.13
MKS1-212ENST00000583577 FAM196AQ6ZSG2 479 aa14.24□□□□□ -0.13
MKS1-212ENST00000583577 NRKQ7Z2Y5 1582 aa14.23□□□□□ -0.13
MKS1-212ENST00000583577 FMN2Q9NZ56 1722 aa14.23□□□□□ -0.13
MKS1-212ENST00000583577 PRAG1Q86YV5 1406 aa14.23□□□□□ -0.13
MKS1-212ENST00000583577 CLTCL1P53675 1640 aa14.23□□□□□ -0.13
MKS1-212ENST00000583577 SPATA31A5Q5VU36 1347 aa14.22□□□□□ -0.13
MKS1-212ENST00000583577 SPATA31A7Q8IWB4 1347 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms