RNA–Protein interactions for RNA: ENST00000583550.1

CCDC178-212, Transcript of coiled-coil domain containing 178, humanhuman

TSL 3

Gene CCDC178, Length 335 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-212ENST00000583550 NKX2-3Q8TAU0 364 aa8.22□□□□□ -1.09
CCDC178-212ENST00000583550 TOP2AP11388 1531 aaKnown RBP8.22□□□□□ -1.09
CCDC178-212ENST00000583550 WIZO95785 1651 aa8.21□□□□□ -1.09
CCDC178-212ENST00000583550 PDE4DQ08499 809 aa8.21□□□□□ -1.1
CCDC178-212ENST00000583550 PARP9Q8IXQ6 854 aa8.21□□□□□ -1.1
CCDC178-212ENST00000583550 ADH1BP00325 375 aa8.2□□□□□ -1.1
CCDC178-212ENST00000583550 PPP1R18Q6NYC8 613 aa8.2□□□□□ -1.1
CCDC178-212ENST00000583550 NUTM1Q86Y26 1132 aa8.2□□□□□ -1.1
CCDC178-212ENST00000583550 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.2□□□□□ -1.1
CCDC178-212ENST00000583550 SALL2Q9Y467 1007 aaPredicted RBP8.2□□□□□ -1.1
CCDC178-212ENST00000583550 TLL1O43897 1013 aa8.19□□□□□ -1.1
CCDC178-212ENST00000583550 SLC27A5Q9Y2P5 690 aa8.19□□□□□ -1.1
CCDC178-212ENST00000583550 IFT140Q96RY7 1462 aa8.19□□□□□ -1.1
CCDC178-212ENST00000583550 HOXA2O43364 376 aa8.18□□□□□ -1.1
CCDC178-212ENST00000583550 FMNL1O95466 1100 aaPredicted RBP8.18□□□□□ -1.1
CCDC178-212ENST00000583550 SPSB2Q99619 263 aa8.18□□□□□ -1.1
CCDC178-212ENST00000583550 Q3C1V9 767 aa8.17□□□□□ -1.1
CCDC178-212ENST00000583550 TPRNQ4KMQ1 711 aa8.17□□□□□ -1.1
CCDC178-212ENST00000583550 THAP11Q96EK4 314 aa8.17□□□□□ -1.1
CCDC178-212ENST00000583550 CCDC88BA6NC98 1476 aa8.17□□□□□ -1.1
CCDC178-212ENST00000583550 KIF21AQ7Z4S6 1674 aa8.17□□□□□ -1.1
CCDC178-212ENST00000583550 DIXDC1Q155Q3 683 aa8.16□□□□□ -1.1
CCDC178-212ENST00000583550 BEGAINQ9BUH8 593 aa8.16□□□□□ -1.1
CCDC178-212ENST00000583550 SLC6A16Q9GZN6 736 aa8.16□□□□□ -1.1
CCDC178-212ENST00000583550 MS4A1P11836 297 aa8.15□□□□□ -1.1
CCDC178-212ENST00000583550 BRICD5Q6PL45 260 aa8.15□□□□□ -1.1
CCDC178-212ENST00000583550 SPIRE2Q8WWL2 714 aa8.15□□□□□ -1.1
CCDC178-212ENST00000583550 S1PR4O95977 384 aa8.14□□□□□ -1.11
CCDC178-212ENST00000583550 CHMP7Q8WUX9 453 aaPredicted RBP8.14□□□□□ -1.11
CCDC178-212ENST00000583550 RNF223E7ERA6 249 aa8.13□□□□□ -1.11
CCDC178-212ENST00000583550 MSS51Q4VC12 460 aa8.13□□□□□ -1.11
CCDC178-212ENST00000583550 ANKLE1Q8NAG6 615 aa8.13□□□□□ -1.11
CCDC178-212ENST00000583550 URB2Q14146 1524 aaKnown RBP8.13□□□□□ -1.11
CCDC178-212ENST00000583550 CYB5RLQ6IPT4 315 aa8.12□□□□□ -1.11
CCDC178-212ENST00000583550 RNF19BQ6ZMZ0 732 aa8.12□□□□□ -1.11
CCDC178-212ENST00000583550 FDX1P10109 184 aa8.11□□□□□ -1.11
CCDC178-212ENST00000583550 FAM160A2Q8N612 972 aaPredicted RBP8.11□□□□□ -1.11
CCDC178-212ENST00000583550 HLA-CQ95604 372 aa8.11□□□□□ -1.11
CCDC178-212ENST00000583550 V9GY48 417 aaPredicted RBP8.11□□□□□ -1.11
CCDC178-212ENST00000583550 GJA5P36382 358 aa8.1□□□□□ -1.11
CCDC178-212ENST00000583550 USB1Q9BQ65 265 aaKnown RBP8.1□□□□□ -1.11
CCDC178-212ENST00000583550 TBC1D2Q9BYX2 928 aa8.1□□□□□ -1.11
CCDC178-212ENST00000583550 PRKD2Q9BZL6 878 aa8.1□□□□□ -1.11
CCDC178-212ENST00000583550 SOGA1O94964 1423 aa8.1□□□□□ -1.11
CCDC178-212ENST00000583550 MOXD2PA6NHM9 499 aa8.09□□□□□ -1.11
CCDC178-212ENST00000583550 GUCA2AQ02747 115 aa8.09□□□□□ -1.11
CCDC178-212ENST00000583550 TOPBP1Q92547 1522 aa8.08□□□□□ -1.12
CCDC178-212ENST00000583550 PPEF1O14829 653 aaPredicted RBP8.08□□□□□ -1.12
CCDC178-212ENST00000583550 NDUFV2P19404 249 aa8.08□□□□□ -1.12
CCDC178-212ENST00000583550 RSBN1LQ6PCB5 846 aaPredicted RBP8.07□□□□□ -1.12
CCDC178-212ENST00000583550 KDM4CQ9H3R0 1056 aa8.07□□□□□ -1.12
CCDC178-212ENST00000583550 PCDHGC3Q9UN70 934 aa8.07□□□□□ -1.12
CCDC178-212ENST00000583550 SPTLC1O15269 473 aa8.06□□□□□ -1.12
CCDC178-212ENST00000583550 MMP16P51512 607 aa8.06□□□□□ -1.12
CCDC178-212ENST00000583550 RETREG3Q86VR2 466 aa8.06□□□□□ -1.12
CCDC178-212ENST00000583550 RSPH6AQ9H0K4 717 aa8.06□□□□□ -1.12
CCDC178-212ENST00000583550 PRDM9Q9NQV7 894 aa8.06□□□□□ -1.12
CCDC178-212ENST00000583550 SPDYE5A6NIY4 337 aa8.05□□□□□ -1.12
CCDC178-212ENST00000583550 C6orf229H3BNL8 230 aa8.05□□□□□ -1.12
CCDC178-212ENST00000583550 SUPT5HO00267 1087 aaKnown RBP8.05□□□□□ -1.12
CCDC178-212ENST00000583550 DXOO77932 396 aaKnown RBP8.05□□□□□ -1.12
CCDC178-212ENST00000583550 SLC19A1P41440 591 aa8.05□□□□□ -1.12
CCDC178-212ENST00000583550 RIC3Q7Z5B4 369 aa8.05□□□□□ -1.12
CCDC178-212ENST00000583550 SYMPKQ92797 1274 aaKnown RBP8.05□□□□□ -1.12
CCDC178-212ENST00000583550 GPBP1L1Q9HC44 474 aaPredicted RBP8.05□□□□□ -1.12
CCDC178-212ENST00000583550 AQRO60306 1485 aaKnown RBP eCLIP8.05□□□□□ -1.12
CCDC178-212ENST00000583550 MTMR2Q13614 643 aa8.04□□□□□ -1.12
CCDC178-212ENST00000583550 DDRGK1Q96HY6 314 aa8.04□□□□□ -1.12
CCDC178-212ENST00000583550 FCF1Q9Y324 198 aaKnown RBP8.04□□□□□ -1.12
CCDC178-212ENST00000583550 TDRD9Q8NDG6 1382 aaKnown RBP8.04□□□□□ -1.12
CCDC178-212ENST00000583550 DNMBPQ6XZF7 1577 aa8.04□□□□□ -1.12
CCDC178-212ENST00000583550 JUNDP17535 347 aa8.03□□□□□ -1.12
CCDC178-212ENST00000583550 TUSC1Q2TAM9 212 aa8.03□□□□□ -1.12
CCDC178-212ENST00000583550 MYSM1Q5VVJ2 828 aa8.03□□□□□ -1.12
CCDC178-212ENST00000583550 EMID1Q96A84 441 aaPredicted RBP8.03□□□□□ -1.12
CCDC178-212ENST00000583550 IRX2Q9BZI1 471 aaPredicted RBP8.03□□□□□ -1.12
CCDC178-212ENST00000583550 ZNF608Q9ULD9 1512 aaPredicted RBP8.03□□□□□ -1.12
CCDC178-212ENST00000583550 RPIAP49247 311 aa8.02□□□□□ -1.13
CCDC178-212ENST00000583550 PLA2G2CQ5R387 149 aa8.02□□□□□ -1.13
CCDC178-212ENST00000583550 PRPF38BQ5VTL8 546 aaKnown RBP8.02□□□□□ -1.13
CCDC178-212ENST00000583550 LIAT1Q6ZQX7 453 aa8.02□□□□□ -1.13
CCDC178-212ENST00000583550 SPRYD7Q5W111 196 aa8.01□□□□□ -1.13
CCDC178-212ENST00000583550 ZBTB3Q9H5J0 574 aa8.01□□□□□ -1.13
CCDC178-212ENST00000583550 NEUROD2Q15784 382 aa8□□□□□ -1.13
CCDC178-212ENST00000583550 ZNF598Q86UK7 904 aaKnown RBP8□□□□□ -1.13
CCDC178-212ENST00000583550 PRR7Q8TB68 274 aa8□□□□□ -1.13
CCDC178-212ENST00000583550 FAM117AQ9C073 453 aa8□□□□□ -1.13
CCDC178-212ENST00000583550 PCDHB15Q9Y5E8 787 aa8□□□□□ -1.13
CCDC178-212ENST00000583550 POLA1P09884 1462 aaPredicted RBP8□□□□□ -1.13
CCDC178-212ENST00000583550 GRIN2BQ13224 1484 aa8□□□□□ -1.13
CCDC178-212ENST00000583550 ZBTB24O43167 697 aaPredicted RBP7.99□□□□□ -1.13
CCDC178-212ENST00000583550 HRCP23327 699 aa7.99□□□□□ -1.13
CCDC178-212ENST00000583550 CLK2P49760 499 aaKnown RBP7.99□□□□□ -1.13
CCDC178-212ENST00000583550 LAPTM4AQ15012 233 aa7.99□□□□□ -1.13
CCDC178-212ENST00000583550 DESI1Q6ICB0 168 aa7.99□□□□□ -1.13
CCDC178-212ENST00000583550 LIMD1Q9UGP4 676 aa7.99□□□□□ -1.13
CCDC178-212ENST00000583550 WRNQ14191 1432 aaPredicted RBP eCLIP7.98□□□□□ -1.13
CCDC178-212ENST00000583550 CD2BP2O95400 341 aaKnown RBP7.98□□□□□ -1.13
CCDC178-212ENST00000583550 SKIV2LQ15477 1246 aaKnown RBP7.98□□□□□ -1.13
CCDC178-212ENST00000583550 SH3D19Q5HYK7 790 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms