RNA–Protein interactions for RNA: ENST00000583254.1

CTC1-211, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-211ENST00000583254 SF3B2Q13435 895 aaKnown RBP11.05□□□□□ -0.64
CTC1-211ENST00000583254 HRCP23327 699 aa11.04□□□□□ -0.64
CTC1-211ENST00000583254 PXDNQ92626 1479 aa11.02□□□□□ -0.65
CTC1-211ENST00000583254 SLIT2O94813 1529 aa11.01□□□□□ -0.65
CTC1-211ENST00000583254 ZNF326Q5BKZ1 582 aaKnown RBP11□□□□□ -0.65
CTC1-211ENST00000583254 UNC5CLQ8IV45 518 aa11□□□□□ -0.65
CTC1-211ENST00000583254 ROBO2Q9HCK4 1378 aa11□□□□□ -0.65
CTC1-211ENST00000583254 NEXMIFQ5QGS0 1516 aa10.99□□□□□ -0.65
CTC1-211ENST00000583254 USP32Q8NFA0 1604 aa10.99□□□□□ -0.65
CTC1-211ENST00000583254 XPCQ01831 940 aaPredicted RBP10.99□□□□□ -0.65
CTC1-211ENST00000583254 SEPT12Q8IYM1 358 aa10.99□□□□□ -0.65
CTC1-211ENST00000583254 NPHP3Q7Z494 1330 aa10.99□□□□□ -0.65
CTC1-211ENST00000583254 YY1P25490 414 aa10.98□□□□□ -0.65
CTC1-211ENST00000583254 PLCH1Q4KWH8 1693 aa10.98□□□□□ -0.65
CTC1-211ENST00000583254 BAG6P46379 1132 aa10.97□□□□□ -0.65
CTC1-211ENST00000583254 CDC42BPGQ6DT37 1551 aa10.97□□□□□ -0.65
CTC1-211ENST00000583254 RGPD1P0DJD0 1748 aa10.96□□□□□ -0.65
CTC1-211ENST00000583254 FAM50AQ14320 339 aaKnown RBP10.96□□□□□ -0.65
CTC1-211ENST00000583254 ESCO1Q5FWF5 840 aa10.96□□□□□ -0.65
CTC1-211ENST00000583254 KRT27Q7Z3Y8 459 aa10.96□□□□□ -0.65
CTC1-211ENST00000583254 CLTCL1P53675 1640 aa10.95□□□□□ -0.66
CTC1-211ENST00000583254 R3HDM1Q15032 1099 aaKnown RBP10.95□□□□□ -0.66
CTC1-211ENST00000583254 NWD2Q9ULI1 1742 aa10.95□□□□□ -0.66
CTC1-211ENST00000583254 PRAG1Q86YV5 1406 aa10.94□□□□□ -0.66
CTC1-211ENST00000583254 NUP155O75694 1391 aa10.94□□□□□ -0.66
CTC1-211ENST00000583254 FOXO3O43524 673 aa10.94□□□□□ -0.66
CTC1-211ENST00000583254 TNS1Q9HBL0 1735 aaKnown RBP10.94□□□□□ -0.66
CTC1-211ENST00000583254 HFM1A2PYH4 1435 aa10.93□□□□□ -0.66
CTC1-211ENST00000583254 ABCA3Q99758 1704 aa10.93□□□□□ -0.66
CTC1-211ENST00000583254 A0A0G2JS52 829 aa10.93□□□□□ -0.66
CTC1-211ENST00000583254 MYT1Q01538 1121 aa10.93□□□□□ -0.66
CTC1-211ENST00000583254 EN1Q05925 392 aaPredicted RBP10.93□□□□□ -0.66
CTC1-211ENST00000583254 VPS72Q15906 364 aa10.93□□□□□ -0.66
CTC1-211ENST00000583254 CCDC9Q9Y3X0 531 aaKnown RBP10.93□□□□□ -0.66
CTC1-211ENST00000583254 APLP2Q06481 763 aa10.92□□□□□ -0.66
CTC1-211ENST00000583254 KIF1BO60333 1816 aa10.92□□□□□ -0.66
CTC1-211ENST00000583254 NUTM2FA1L443 756 aa10.91□□□□□ -0.66
CTC1-211ENST00000583254 LRPPRCP42704 1394 aaKnown RBP10.9□□□□□ -0.66
CTC1-211ENST00000583254 SPATA31A3Q5VYP0 1347 aa10.9□□□□□ -0.66
CTC1-211ENST00000583254 NRAPQ86VF7 1730 aa10.9□□□□□ -0.66
CTC1-211ENST00000583254 KIF1AQ12756 1690 aa10.9□□□□□ -0.66
CTC1-211ENST00000583254 ONECUT3O60422 494 aaPredicted RBP10.9□□□□□ -0.66
CTC1-211ENST00000583254 PLEKHG5O94827 1062 aa10.9□□□□□ -0.66
CTC1-211ENST00000583254 NAIPQ13075 1403 aa10.9□□□□□ -0.66
CTC1-211ENST00000583254 HAP1P54257 671 aaPredicted RBP10.89□□□□□ -0.67
CTC1-211ENST00000583254 FAM182BQ5T319 152 aa10.89□□□□□ -0.67
CTC1-211ENST00000583254 CCDC144AA2RUR9 1427 aa10.89□□□□□ -0.67
CTC1-211ENST00000583254 DISP2A7MBM2 1401 aa10.89□□□□□ -0.67
CTC1-211ENST00000583254 LOC105371045A0A1W2PR82 267 aa10.88□□□□□ -0.67
CTC1-211ENST00000583254 ADGRB2O60241 1585 aa10.88□□□□□ -0.67
CTC1-211ENST00000583254 TNS3Q68CZ2 1445 aa10.88□□□□□ -0.67
CTC1-211ENST00000583254 FMN2Q9NZ56 1722 aa10.88□□□□□ -0.67
CTC1-211ENST00000583254 ROCK1Q13464 1354 aa10.88□□□□□ -0.67
CTC1-211ENST00000583254 EZH2Q15910 746 aaKnown RBP10.87□□□□□ -0.67
CTC1-211ENST00000583254 FAM98CQ17RN3 349 aaKnown RBP10.87□□□□□ -0.67
CTC1-211ENST00000583254 CABLES1Q8TDN4 633 aa10.87□□□□□ -0.67
CTC1-211ENST00000583254 PPLO60437 1756 aa10.87□□□□□ -0.67
CTC1-211ENST00000583254 CAMTA1Q9Y6Y1 1673 aa10.86□□□□□ -0.67
CTC1-211ENST00000583254 RREB1Q92766 1687 aa10.85□□□□□ -0.67
CTC1-211ENST00000583254 THSD7AQ9UPZ6 1657 aa10.85□□□□□ -0.67
CTC1-211ENST00000583254 NUP188Q5SRE5 1749 aa10.85□□□□□ -0.67
CTC1-211ENST00000583254 KRT28Q7Z3Y7 464 aa10.85□□□□□ -0.67
CTC1-211ENST00000583254 RGPD8O14715 1765 aaPredicted RBP10.85□□□□□ -0.67
CTC1-211ENST00000583254 VGFO15240 615 aaPredicted RBP10.84□□□□□ -0.67
CTC1-211ENST00000583254 IFT172Q9UG01 1749 aa10.84□□□□□ -0.67
CTC1-211ENST00000583254 FAM83GA6ND36 823 aa10.83□□□□□ -0.68
CTC1-211ENST00000583254 KNDC1Q76NI1 1749 aa10.83□□□□□ -0.68
CTC1-211ENST00000583254 PLEKHH1Q9ULM0 1364 aa10.82□□□□□ -0.68
CTC1-211ENST00000583254 LMOD2Q6P5Q4 547 aa10.82□□□□□ -0.68
CTC1-211ENST00000583254 WAPLQ7Z5K2 1190 aa10.82□□□□□ -0.68
CTC1-211ENST00000583254 CAMKK2Q96RR4 588 aa10.82□□□□□ -0.68
CTC1-211ENST00000583254 COL14A1Q05707 1796 aaKnown RBP10.82□□□□□ -0.68
CTC1-211ENST00000583254 TECPR2O15040 1411 aa10.82□□□□□ -0.68
CTC1-211ENST00000583254 SENP3-EIF4A1A0A087X0R7 540 aa10.81□□□□□ -0.68
CTC1-211ENST00000583254 IFFO2Q5TF58 517 aa10.81□□□□□ -0.68
CTC1-211ENST00000583254 PPP1R1BQ9UD71 204 aaPredicted RBP10.81□□□□□ -0.68
CTC1-211ENST00000583254 ARHGEF10O15013 1369 aa10.8□□□□□ -0.68
CTC1-211ENST00000583254 NINLQ9Y2I6 1382 aa10.8□□□□□ -0.68
CTC1-211ENST00000583254 DCAF8L1A6NGE4 600 aa10.8□□□□□ -0.68
CTC1-211ENST00000583254 TRIM37O94972 964 aa10.8□□□□□ -0.68
CTC1-211ENST00000583254 BTG4Q9NY30 223 aa10.8□□□□□ -0.68
CTC1-211ENST00000583254 STK26Q9P289 416 aa10.8□□□□□ -0.68
CTC1-211ENST00000583254 SBNO1A3KN83 1393 aa10.79□□□□□ -0.68
CTC1-211ENST00000583254 PARD3Q8TEW0 1356 aa10.79□□□□□ -0.68
CTC1-211ENST00000583254 ITGAEP38570 1179 aa10.79□□□□□ -0.68
CTC1-211ENST00000583254 PSME1Q06323 249 aa10.79□□□□□ -0.68
CTC1-211ENST00000583254 PHF8Q9UPP1 1060 aa10.79□□□□□ -0.68
CTC1-211ENST00000583254 NRXN1Q9ULB1 1477 aa10.79□□□□□ -0.68
CTC1-211ENST00000583254 SPATA31A5Q5VU36 1347 aa10.79□□□□□ -0.68
CTC1-211ENST00000583254 SPATA31A7Q8IWB4 1347 aa10.79□□□□□ -0.68
CTC1-211ENST00000583254 APBA3O96018 575 aa10.78□□□□□ -0.68
CTC1-211ENST00000583254 ZNF784Q8NCA9 323 aaPredicted RBP10.78□□□□□ -0.68
CTC1-211ENST00000583254 RPGRIP1LQ68CZ1 1315 aa10.78□□□□□ -0.68
CTC1-211ENST00000583254 TRPM3Q9HCF6 1732 aaPredicted RBP10.78□□□□□ -0.68
CTC1-211ENST00000583254 SPON1Q9HCB6 807 aa10.77□□□□□ -0.69
CTC1-211ENST00000583254 CRYBG1Q9Y4K1 1723 aa10.77□□□□□ -0.69
CTC1-211ENST00000583254 NRKQ7Z2Y5 1582 aa10.77□□□□□ -0.69
CTC1-211ENST00000583254 RRBP1Q9P2E9 1410 aaKnown RBP10.76□□□□□ -0.69
CTC1-211ENST00000583254 ALS2Q96Q42 1657 aa10.76□□□□□ -0.69
CTC1-211ENST00000583254 KCNQ2O43526 872 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms