RNA–Protein interactions for RNA: ENST00000583213.1

TNFAIP1-206, Transcript of TNF alpha induced protein 1, humanhuman

TSL 3

Gene TNFAIP1, Length 582 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-206ENST00000583213 ORAI2Q96SN7 254 aa24.05■■□□□ 1.44
TNFAIP1-206ENST00000583213 COL22A1Q8NFW1 1626 aaPredicted RBP24.05■■□□□ 1.44
TNFAIP1-206ENST00000583213 AFF2P51816 1311 aa24.05■■□□□ 1.44
TNFAIP1-206ENST00000583213 ABCC11Q96J66 1382 aa24.03■■□□□ 1.44
TNFAIP1-206ENST00000583213 NRXN1Q9ULB1 1477 aa24.02■■□□□ 1.44
TNFAIP1-206ENST00000583213 RXRBP28702 533 aa24.02■■□□□ 1.44
TNFAIP1-206ENST00000583213 PXDNQ92626 1479 aa24■■□□□ 1.43
TNFAIP1-206ENST00000583213 RGL3Q3MIN7 710 aa23.99■■□□□ 1.43
TNFAIP1-206ENST00000583213 MYOM2P54296 1465 aa23.99■■□□□ 1.43
TNFAIP1-206ENST00000583213 YTHDC2Q9H6S0 1430 aaKnown RBP23.97■■□□□ 1.43
TNFAIP1-206ENST00000583213 NPHP3Q7Z494 1330 aa23.96■■□□□ 1.43
TNFAIP1-206ENST00000583213 UPF1Q92900 1129 aaKnown RBP eCLIP23.96■■□□□ 1.43
TNFAIP1-206ENST00000583213 C8orf37Q96NL8 207 aa23.96■■□□□ 1.43
TNFAIP1-206ENST00000583213 FMN2Q9NZ56 1722 aa23.96■■□□□ 1.43
TNFAIP1-206ENST00000583213 SIRT1Q96EB6 747 aa23.95■■□□□ 1.42
TNFAIP1-206ENST00000583213 PLEKHH1Q9ULM0 1364 aa23.94■■□□□ 1.42
TNFAIP1-206ENST00000583213 RGS12O14924 1447 aa23.93■■□□□ 1.42
TNFAIP1-206ENST00000583213 WAPLQ7Z5K2 1190 aa23.93■■□□□ 1.42
TNFAIP1-206ENST00000583213 C14orf93Q9H972 538 aaKnown RBP23.93■■□□□ 1.42
TNFAIP1-206ENST00000583213 RBM6P78332 1123 aaKnown RBP23.92■■□□□ 1.42
TNFAIP1-206ENST00000583213 TMEM132EQ6IEE7 984 aa23.92■■□□□ 1.42
TNFAIP1-206ENST00000583213 ESCO1Q5FWF5 840 aa23.91■■□□□ 1.42
TNFAIP1-206ENST00000583213 STK26Q9P289 416 aa23.91■■□□□ 1.42
TNFAIP1-206ENST00000583213 KIF1AQ12756 1690 aa23.91■■□□□ 1.42
TNFAIP1-206ENST00000583213 FNBP4Q8N3X1 1017 aaPredicted RBP23.9■■□□□ 1.42
TNFAIP1-206ENST00000583213 QTRT2Q9H974 415 aaKnown RBP23.9■■□□□ 1.42
TNFAIP1-206ENST00000583213 MARF1Q9Y4F3 1742 aaKnown RBP23.9■■□□□ 1.42
TNFAIP1-206ENST00000583213 RAB3GAP2Q9H2M9 1393 aa23.9■■□□□ 1.42
TNFAIP1-206ENST00000583213 ADAMTS2O95450 1211 aa23.89■■□□□ 1.41
TNFAIP1-206ENST00000583213 NGLY1Q96IV0 654 aa23.88■■□□□ 1.41
TNFAIP1-206ENST00000583213 ATRNO75882 1429 aa23.86■■□□□ 1.41
TNFAIP1-206ENST00000583213 DLC1Q96QB1 1528 aa23.86■■□□□ 1.41
TNFAIP1-206ENST00000583213 FOXO3O43524 673 aa23.86■■□□□ 1.41
TNFAIP1-206ENST00000583213 ADGRB1O14514 1584 aa23.84■■□□□ 1.41
TNFAIP1-206ENST00000583213 DHX57Q6P158 1386 aaKnown RBP23.83■■□□□ 1.41
TNFAIP1-206ENST00000583213 CFAP70Q5T0N1 1121 aa23.83■■□□□ 1.41
TNFAIP1-206ENST00000583213 ADGRB2O60241 1585 aa23.82■■□□□ 1.4
TNFAIP1-206ENST00000583213 BCL9LQ86UU0 1499 aa23.82■■□□□ 1.4
TNFAIP1-206ENST00000583213 USP21Q9UK80 565 aa23.82■■□□□ 1.4
TNFAIP1-206ENST00000583213 TRPC5Q9UL62 973 aaPredicted RBP23.82■■□□□ 1.4
TNFAIP1-206ENST00000583213 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.81■■□□□ 1.4
TNFAIP1-206ENST00000583213 RGPD8O14715 1765 aaPredicted RBP23.8■■□□□ 1.4
TNFAIP1-206ENST00000583213 SPATA31A3Q5VYP0 1347 aa23.8■■□□□ 1.4
TNFAIP1-206ENST00000583213 NUTM2FA1L443 756 aa23.79■■□□□ 1.4
TNFAIP1-206ENST00000583213 XPCQ01831 940 aaPredicted RBP23.79■■□□□ 1.4
TNFAIP1-206ENST00000583213 HRCP23327 699 aa23.77■■□□□ 1.4
TNFAIP1-206ENST00000583213 USP32Q8NFA0 1604 aa23.77■■□□□ 1.4
TNFAIP1-206ENST00000583213 ANKARQ7Z5J8 1434 aa23.76■■□□□ 1.39
TNFAIP1-206ENST00000583213 SLIT2O94813 1529 aa23.75■■□□□ 1.39
TNFAIP1-206ENST00000583213 PRAM1Q96QH2 718 aa23.75■■□□□ 1.39
TNFAIP1-206ENST00000583213 TNS3Q68CZ2 1445 aa23.75■■□□□ 1.39
TNFAIP1-206ENST00000583213 PHF8Q9UPP1 1060 aa23.74■■□□□ 1.39
TNFAIP1-206ENST00000583213 ATAD2Q6PL18 1390 aa23.74■■□□□ 1.39
TNFAIP1-206ENST00000583213 EP400Q96L91 3159 aa23.73■■□□□ 1.39
TNFAIP1-206ENST00000583213 STAC3Q96MF2 364 aa23.73■■□□□ 1.39
TNFAIP1-206ENST00000583213 SBNO1A3KN83 1393 aa23.73■■□□□ 1.39
TNFAIP1-206ENST00000583213 KRT28Q7Z3Y7 464 aa23.72■■□□□ 1.39
TNFAIP1-206ENST00000583213 ABCA3Q99758 1704 aa23.71■■□□□ 1.39
TNFAIP1-206ENST00000583213 GLI3P10071 1580 aa23.68■■□□□ 1.38
TNFAIP1-206ENST00000583213 TRPM3Q9HCF6 1732 aaPredicted RBP23.67■■□□□ 1.38
TNFAIP1-206ENST00000583213 PSME1Q06323 249 aa23.67■■□□□ 1.38
TNFAIP1-206ENST00000583213 GJD4Q96KN9 370 aaPredicted RBP23.67■■□□□ 1.38
TNFAIP1-206ENST00000583213 NWD2Q9ULI1 1742 aa23.67■■□□□ 1.38
TNFAIP1-206ENST00000583213 ARHGEF10O15013 1369 aa23.66■■□□□ 1.38
TNFAIP1-206ENST00000583213 TULP4Q9NRJ4 1543 aa23.66■■□□□ 1.38
TNFAIP1-206ENST00000583213 UNC5CLQ8IV45 518 aa23.66■■□□□ 1.38
TNFAIP1-206ENST00000583213 POGKQ9P215 609 aa23.66■■□□□ 1.38
TNFAIP1-206ENST00000583213 RALGAPBQ86X10 1494 aa23.66■■□□□ 1.38
TNFAIP1-206ENST00000583213 SAFB2Q14151 953 aaKnown RBP eCLIP23.65■■□□□ 1.38
TNFAIP1-206ENST00000583213 EIF3AQ14152 1382 aaKnown RBP23.65■■□□□ 1.38
TNFAIP1-206ENST00000583213 PLCH1Q4KWH8 1693 aa23.64■■□□□ 1.37
TNFAIP1-206ENST00000583213 ALS2Q96Q42 1657 aa23.64■■□□□ 1.37
TNFAIP1-206ENST00000583213 ARHGEF28Q8N1W1 1705 aaKnown RBP23.63■■□□□ 1.37
TNFAIP1-206ENST00000583213 DCAF11Q8TEB1 546 aa23.63■■□□□ 1.37
TNFAIP1-206ENST00000583213 TRAK1Q9UPV9 953 aa23.62■■□□□ 1.37
TNFAIP1-206ENST00000583213 PRR36Q9H6K5 1346 aa23.61■■□□□ 1.37
TNFAIP1-206ENST00000583213 KIAA1210Q9ULL0 1709 aa23.59■■□□□ 1.37
TNFAIP1-206ENST00000583213 WASLO00401 505 aaPredicted RBP23.58■■□□□ 1.37
TNFAIP1-206ENST00000583213 KDM2AQ9Y2K7 1162 aa23.58■■□□□ 1.37
TNFAIP1-206ENST00000583213 CRYBG1Q9Y4K1 1723 aa23.58■■□□□ 1.37
TNFAIP1-206ENST00000583213 VPS72Q15906 364 aa23.57■■□□□ 1.36
TNFAIP1-206ENST00000583213 CCDC125Q86Z20 511 aa23.57■■□□□ 1.36
TNFAIP1-206ENST00000583213 PMFBP1Q8TBY8 1022 aa23.57■■□□□ 1.36
TNFAIP1-206ENST00000583213 CABLES1Q8TDN4 633 aa23.57■■□□□ 1.36
TNFAIP1-206ENST00000583213 HIRIP3Q9BW71 556 aaPredicted RBP23.57■■□□□ 1.36
TNFAIP1-206ENST00000583213 MINK1Q8N4C8 1332 aaPredicted RBP23.57■■□□□ 1.36
TNFAIP1-206ENST00000583213 NRAPQ86VF7 1730 aa23.56■■□□□ 1.36
TNFAIP1-206ENST00000583213 ITSN1Q15811 1721 aa23.56■■□□□ 1.36
TNFAIP1-206ENST00000583213 ATP7BP35670 1465 aa23.56■■□□□ 1.36
TNFAIP1-206ENST00000583213 SRCAPQ6ZRS2 3230 aa23.55■■□□□ 1.36
TNFAIP1-206ENST00000583213 BRWD3Q6RI45 1802 aa23.55■■□□□ 1.36
TNFAIP1-206ENST00000583213 ONECUT3O60422 494 aaPredicted RBP23.55■■□□□ 1.36
TNFAIP1-206ENST00000583213 GPRASP1Q5JY77 1395 aa23.54■■□□□ 1.36
TNFAIP1-206ENST00000583213 HAP1P54257 671 aaPredicted RBP23.52■■□□□ 1.36
TNFAIP1-206ENST00000583213 COL14A1Q05707 1796 aaKnown RBP23.52■■□□□ 1.36
TNFAIP1-206ENST00000583213 TOPAZ1Q8N9V7 1692 aa23.51■■□□□ 1.35
TNFAIP1-206ENST00000583213 FAM83GA6ND36 823 aa23.51■■□□□ 1.35
TNFAIP1-206ENST00000583213 LMOD2Q6P5Q4 547 aa23.49■■□□□ 1.35
TNFAIP1-206ENST00000583213 BLMP54132 1417 aaPredicted RBP23.49■■□□□ 1.35
TNFAIP1-206ENST00000583213 SEPT12Q8IYM1 358 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms