RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 SF3B2Q13435 895 aaKnown RBP13.16□□□□□ -0.3
PDLIM1P3-201ENST00000582370 DEFB132Q7Z7B7 95 aa13.15□□□□□ -0.3
PDLIM1P3-201ENST00000582370 NWD2Q9ULI1 1742 aa13.15□□□□□ -0.3
PDLIM1P3-201ENST00000582370 PXDNQ92626 1479 aa13.15□□□□□ -0.3
PDLIM1P3-201ENST00000582370 PRAG1Q86YV5 1406 aa13.14□□□□□ -0.31
PDLIM1P3-201ENST00000582370 SLIT2O94813 1529 aa13.14□□□□□ -0.31
PDLIM1P3-201ENST00000582370 NEXMIFQ5QGS0 1516 aa13.14□□□□□ -0.31
PDLIM1P3-201ENST00000582370 RGPD1P0DJD0 1748 aa13.14□□□□□ -0.31
PDLIM1P3-201ENST00000582370 CDC42BPGQ6DT37 1551 aa13.14□□□□□ -0.31
PDLIM1P3-201ENST00000582370 USP32Q8NFA0 1604 aa13.13□□□□□ -0.31
PDLIM1P3-201ENST00000582370 KIF1BO60333 1816 aa13.13□□□□□ -0.31
PDLIM1P3-201ENST00000582370 PLCH1Q4KWH8 1693 aa13.13□□□□□ -0.31
PDLIM1P3-201ENST00000582370 TRIM26Q12899 539 aaPredicted RBP13.13□□□□□ -0.31
PDLIM1P3-201ENST00000582370 ORAI2Q96SN7 254 aa13.13□□□□□ -0.31
PDLIM1P3-201ENST00000582370 NPHP3Q7Z494 1330 aa13.13□□□□□ -0.31
PDLIM1P3-201ENST00000582370 HRCP23327 699 aa13.11□□□□□ -0.31
PDLIM1P3-201ENST00000582370 UNC5CLQ8IV45 518 aa13.1□□□□□ -0.31
PDLIM1P3-201ENST00000582370 ACIN1Q9UKV3 1341 aaKnown RBP13.1□□□□□ -0.31
PDLIM1P3-201ENST00000582370 KIF1AQ12756 1690 aa13.09□□□□□ -0.31
PDLIM1P3-201ENST00000582370 HFM1A2PYH4 1435 aa13.09□□□□□ -0.31
PDLIM1P3-201ENST00000582370 ABCA3Q99758 1704 aa13.08□□□□□ -0.32
PDLIM1P3-201ENST00000582370 PSDA5PKW4 1024 aaPredicted RBP13.08□□□□□ -0.32
PDLIM1P3-201ENST00000582370 ZNF326Q5BKZ1 582 aaKnown RBP13.08□□□□□ -0.32
PDLIM1P3-201ENST00000582370 CLTCL1P53675 1640 aa13.08□□□□□ -0.32
PDLIM1P3-201ENST00000582370 TNS1Q9HBL0 1735 aaKnown RBP13.08□□□□□ -0.32
PDLIM1P3-201ENST00000582370 ROBO2Q9HCK4 1378 aa13.07□□□□□ -0.32
PDLIM1P3-201ENST00000582370 BAG6P46379 1132 aa13.07□□□□□ -0.32
PDLIM1P3-201ENST00000582370 PPARGC1BQ86YN6 1023 aaKnown RBP13.07□□□□□ -0.32
PDLIM1P3-201ENST00000582370 LRPPRCP42704 1394 aaKnown RBP13.07□□□□□ -0.32
PDLIM1P3-201ENST00000582370 SEPT12Q8IYM1 358 aa13.06□□□□□ -0.32
PDLIM1P3-201ENST00000582370 NUP155O75694 1391 aa13.05□□□□□ -0.32
PDLIM1P3-201ENST00000582370 ROCK1Q13464 1354 aa13.05□□□□□ -0.32
PDLIM1P3-201ENST00000582370 KRT27Q7Z3Y8 459 aa13.04□□□□□ -0.32
PDLIM1P3-201ENST00000582370 NRAPQ86VF7 1730 aa13.04□□□□□ -0.32
PDLIM1P3-201ENST00000582370 FMN2Q9NZ56 1722 aa13.03□□□□□ -0.32
PDLIM1P3-201ENST00000582370 PPLO60437 1756 aa13.03□□□□□ -0.32
PDLIM1P3-201ENST00000582370 ONECUT3O60422 494 aaPredicted RBP13.03□□□□□ -0.32
PDLIM1P3-201ENST00000582370 YY1P25490 414 aa13.03□□□□□ -0.32
PDLIM1P3-201ENST00000582370 FAM50AQ14320 339 aaKnown RBP13.03□□□□□ -0.32
PDLIM1P3-201ENST00000582370 VPS72Q15906 364 aa13.03□□□□□ -0.32
PDLIM1P3-201ENST00000582370 ESCO1Q5FWF5 840 aa13.03□□□□□ -0.32
PDLIM1P3-201ENST00000582370 DISP2A7MBM2 1401 aa13.03□□□□□ -0.32
PDLIM1P3-201ENST00000582370 ADGRB2O60241 1585 aa13.03□□□□□ -0.32
PDLIM1P3-201ENST00000582370 CCDC144AA2RUR9 1427 aa13.02□□□□□ -0.33
PDLIM1P3-201ENST00000582370 FOXO3O43524 673 aa13.01□□□□□ -0.33
PDLIM1P3-201ENST00000582370 KNDC1Q76NI1 1749 aa13.01□□□□□ -0.33
PDLIM1P3-201ENST00000582370 SPATA31A3Q5VYP0 1347 aa13□□□□□ -0.33
PDLIM1P3-201ENST00000582370 IFT172Q9UG01 1749 aa12.99□□□□□ -0.33
PDLIM1P3-201ENST00000582370 RREB1Q92766 1687 aa12.99□□□□□ -0.33
PDLIM1P3-201ENST00000582370 XPCQ01831 940 aaPredicted RBP12.99□□□□□ -0.33
PDLIM1P3-201ENST00000582370 R3HDM1Q15032 1099 aaKnown RBP12.99□□□□□ -0.33
PDLIM1P3-201ENST00000582370 RGPD8O14715 1765 aaPredicted RBP12.99□□□□□ -0.33
PDLIM1P3-201ENST00000582370 NAIPQ13075 1403 aa12.98□□□□□ -0.33
PDLIM1P3-201ENST00000582370 TNS3Q68CZ2 1445 aa12.97□□□□□ -0.33
PDLIM1P3-201ENST00000582370 THSD7AQ9UPZ6 1657 aa12.97□□□□□ -0.33
PDLIM1P3-201ENST00000582370 VGFO15240 615 aaPredicted RBP12.97□□□□□ -0.33
PDLIM1P3-201ENST00000582370 CCDC9Q9Y3X0 531 aaKnown RBP12.97□□□□□ -0.33
PDLIM1P3-201ENST00000582370 EN1Q05925 392 aaPredicted RBP12.96□□□□□ -0.33
PDLIM1P3-201ENST00000582370 COL14A1Q05707 1796 aaKnown RBP12.96□□□□□ -0.34
PDLIM1P3-201ENST00000582370 NUP188Q5SRE5 1749 aa12.96□□□□□ -0.34
PDLIM1P3-201ENST00000582370 HAP1P54257 671 aaPredicted RBP12.95□□□□□ -0.34
PDLIM1P3-201ENST00000582370 TECPR2O15040 1411 aa12.95□□□□□ -0.34
PDLIM1P3-201ENST00000582370 A0A0G2JS52 829 aa12.94□□□□□ -0.34
PDLIM1P3-201ENST00000582370 MYT1Q01538 1121 aa12.94□□□□□ -0.34
PDLIM1P3-201ENST00000582370 PARD3Q8TEW0 1356 aa12.94□□□□□ -0.34
PDLIM1P3-201ENST00000582370 ARHGEF10O15013 1369 aa12.92□□□□□ -0.34
PDLIM1P3-201ENST00000582370 RPGRIP1LQ68CZ1 1315 aa12.91□□□□□ -0.34
PDLIM1P3-201ENST00000582370 FAM98CQ17RN3 349 aaKnown RBP12.91□□□□□ -0.34
PDLIM1P3-201ENST00000582370 KRT28Q7Z3Y7 464 aa12.91□□□□□ -0.34
PDLIM1P3-201ENST00000582370 SBNO1A3KN83 1393 aa12.91□□□□□ -0.34
PDLIM1P3-201ENST00000582370 NINLQ9Y2I6 1382 aa12.91□□□□□ -0.34
PDLIM1P3-201ENST00000582370 CAMTA1Q9Y6Y1 1673 aa12.9□□□□□ -0.34
PDLIM1P3-201ENST00000582370 NUTM2FA1L443 756 aa12.9□□□□□ -0.34
PDLIM1P3-201ENST00000582370 DCAF8L1A6NGE4 600 aa12.9□□□□□ -0.34
PDLIM1P3-201ENST00000582370 TRPM3Q9HCF6 1732 aaPredicted RBP12.9□□□□□ -0.34
PDLIM1P3-201ENST00000582370 CRYBG1Q9Y4K1 1723 aa12.9□□□□□ -0.34
PDLIM1P3-201ENST00000582370 NRXN1Q9ULB1 1477 aa12.9□□□□□ -0.34
PDLIM1P3-201ENST00000582370 ALS2Q96Q42 1657 aa12.89□□□□□ -0.35
PDLIM1P3-201ENST00000582370 PSME1Q06323 249 aa12.89□□□□□ -0.35
PDLIM1P3-201ENST00000582370 EZH2Q15910 746 aaKnown RBP12.89□□□□□ -0.35
PDLIM1P3-201ENST00000582370 CHD4Q14839 1912 aa12.88□□□□□ -0.35
PDLIM1P3-201ENST00000582370 ITGAEP38570 1179 aa12.88□□□□□ -0.35
PDLIM1P3-201ENST00000582370 CABLES1Q8TDN4 633 aa12.88□□□□□ -0.35
PDLIM1P3-201ENST00000582370 PCGF6Q9BYE7 350 aa12.88□□□□□ -0.35
PDLIM1P3-201ENST00000582370 UTRNP46939 3433 aa12.88□□□□□ -0.35
PDLIM1P3-201ENST00000582370 CAMKK2Q96RR4 588 aa12.87□□□□□ -0.35
PDLIM1P3-201ENST00000582370 RGPD3A6NKT7 1758 aaPredicted RBP12.86□□□□□ -0.35
PDLIM1P3-201ENST00000582370 RGPD4Q7Z3J3 1758 aa12.86□□□□□ -0.35
PDLIM1P3-201ENST00000582370 ABCC11Q96J66 1382 aa12.86□□□□□ -0.35
PDLIM1P3-201ENST00000582370 FAM83GA6ND36 823 aa12.86□□□□□ -0.35
PDLIM1P3-201ENST00000582370 FAM182BQ5T319 152 aa12.85□□□□□ -0.35
PDLIM1P3-201ENST00000582370 IFFO2Q5TF58 517 aa12.85□□□□□ -0.35
PDLIM1P3-201ENST00000582370 WAPLQ7Z5K2 1190 aa12.85□□□□□ -0.35
PDLIM1P3-201ENST00000582370 BTG4Q9NY30 223 aa12.85□□□□□ -0.35
PDLIM1P3-201ENST00000582370 PPP1R1BQ9UD71 204 aaPredicted RBP12.85□□□□□ -0.35
PDLIM1P3-201ENST00000582370 PHF8Q9UPP1 1060 aa12.85□□□□□ -0.35
PDLIM1P3-201ENST00000582370 SPATA31A5Q5VU36 1347 aa12.85□□□□□ -0.35
PDLIM1P3-201ENST00000582370 SPATA31A7Q8IWB4 1347 aa12.85□□□□□ -0.35
PDLIM1P3-201ENST00000582370 PLEKHH1Q9ULM0 1364 aa12.84□□□□□ -0.35
PDLIM1P3-201ENST00000582370 NBPF8Q3BBV2 869 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms