RNA–Protein interactions for RNA: ENST00000581497.1

SRSF1-203, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-203ENST00000581497 PROX2Q3B8N5 592 aa12.49□□□□□ -0.41
SRSF1-203ENST00000581497 IRX2Q9BZI1 471 aaPredicted RBP12.49□□□□□ -0.41
SRSF1-203ENST00000581497 ABCC1P33527 1531 aa12.48□□□□□ -0.41
SRSF1-203ENST00000581497 ARHGEF12Q9NZN5 1544 aa12.48□□□□□ -0.41
SRSF1-203ENST00000581497 CCNB3Q8WWL7 1395 aa12.48□□□□□ -0.41
SRSF1-203ENST00000581497 CFDP1Q9UEE9 299 aaPredicted RBP12.48□□□□□ -0.41
SRSF1-203ENST00000581497 CDC42BPBQ9Y5S2 1711 aa12.48□□□□□ -0.41
SRSF1-203ENST00000581497 RIMS1Q86UR5 1692 aaKnown RBP12.48□□□□□ -0.41
SRSF1-203ENST00000581497 GPATCH8Q9UKJ3 1502 aaKnown RBP12.47□□□□□ -0.41
SRSF1-203ENST00000581497 ANKK1Q8NFD2 765 aa12.47□□□□□ -0.41
SRSF1-203ENST00000581497 SIGLEC1Q9BZZ2 1709 aa12.46□□□□□ -0.41
SRSF1-203ENST00000581497 COL9A1P20849 921 aa12.46□□□□□ -0.41
SRSF1-203ENST00000581497 TYW1BQ6NUM6 668 aa12.46□□□□□ -0.41
SRSF1-203ENST00000581497 LMTK3Q96Q04 1460 aa12.46□□□□□ -0.42
SRSF1-203ENST00000581497 HNRNPMP52272 730 aaKnown RBP eCLIP12.45□□□□□ -0.42
SRSF1-203ENST00000581497 FBXW7Q969H0 707 aa12.45□□□□□ -0.42
SRSF1-203ENST00000581497 PLEKHH2Q8IVE3 1493 aa12.45□□□□□ -0.42
SRSF1-203ENST00000581497 KIAA1107Q9UPP5 1409 aa12.45□□□□□ -0.42
SRSF1-203ENST00000581497 REREQ9P2R6 1566 aa12.44□□□□□ -0.42
SRSF1-203ENST00000581497 DIP2CQ9Y2E4 1556 aa12.44□□□□□ -0.42
SRSF1-203ENST00000581497 SPAG9O60271 1321 aaKnown RBP12.44□□□□□ -0.42
SRSF1-203ENST00000581497 ESF1Q9H501 851 aaKnown RBP12.44□□□□□ -0.42
SRSF1-203ENST00000581497 CDC42BPAQ5VT25 1732 aa12.43□□□□□ -0.42
SRSF1-203ENST00000581497 PHF14O94880 888 aa12.43□□□□□ -0.42
SRSF1-203ENST00000581497 AGLP35573 1532 aa12.42□□□□□ -0.42
SRSF1-203ENST00000581497 ITSN2Q9NZM3 1697 aa12.42□□□□□ -0.42
SRSF1-203ENST00000581497 LOC105371045A0A1W2PR82 267 aa12.42□□□□□ -0.42
SRSF1-203ENST00000581497 CEBPAP49715 358 aaPredicted RBP12.42□□□□□ -0.42
SRSF1-203ENST00000581497 HSPA2P54652 639 aa12.42□□□□□ -0.42
SRSF1-203ENST00000581497 SAMD9LQ8IVG5 1584 aa12.42□□□□□ -0.42
SRSF1-203ENST00000581497 EHBP1L1Q8N3D4 1523 aa12.42□□□□□ -0.42
SRSF1-203ENST00000581497 SYCP2Q9BX26 1530 aa12.42□□□□□ -0.42
SRSF1-203ENST00000581497 ABCA6Q8N139 1617 aa12.41□□□□□ -0.42
SRSF1-203ENST00000581497 ITGBL1O95965 494 aaPredicted RBP12.41□□□□□ -0.42
SRSF1-203ENST00000581497 BCAMP50895 628 aa12.41□□□□□ -0.42
SRSF1-203ENST00000581497 LAPTM4BQ86VI4 370 aa12.41□□□□□ -0.42
SRSF1-203ENST00000581497 FER1L4A9Z1Z3 1794 aa12.41□□□□□ -0.42
SRSF1-203ENST00000581497 SOWAHBA6NEL2 793 aa12.39□□□□□ -0.43
SRSF1-203ENST00000581497 CADPS2Q86UW7 1296 aa12.39□□□□□ -0.43
SRSF1-203ENST00000581497 KIAA1468Q9P260 1216 aa12.39□□□□□ -0.43
SRSF1-203ENST00000581497 ZNF644Q9H582 1327 aaPredicted RBP12.38□□□□□ -0.43
SRSF1-203ENST00000581497 KIDINS220Q9ULH0 1771 aa12.38□□□□□ -0.43
SRSF1-203ENST00000581497 VPS8Q8N3P4 1428 aa12.37□□□□□ -0.43
SRSF1-203ENST00000581497 CNTLNQ9NXG0 1405 aa12.37□□□□□ -0.43
SRSF1-203ENST00000581497 ZFRQ96KR1 1074 aaKnown RBP12.37□□□□□ -0.43
SRSF1-203ENST00000581497 TIAM1Q13009 1591 aa12.37□□□□□ -0.43
SRSF1-203ENST00000581497 ATP7AQ04656 1500 aa12.37□□□□□ -0.43
SRSF1-203ENST00000581497 UHRF1BP1Q6BDS2 1440 aa12.37□□□□□ -0.43
SRSF1-203ENST00000581497 ONECUT3O60422 494 aaPredicted RBP12.36□□□□□ -0.43
SRSF1-203ENST00000581497 RSPH4AQ5TD94 716 aa12.36□□□□□ -0.43
SRSF1-203ENST00000581497 EPAS1Q99814 870 aa12.36□□□□□ -0.43
SRSF1-203ENST00000581497 NCOA2Q15596 1464 aa12.35□□□□□ -0.43
SRSF1-203ENST00000581497 MBD5Q9P267 1494 aa12.35□□□□□ -0.43
SRSF1-203ENST00000581497 NYAP1Q6ZVC0 841 aa12.35□□□□□ -0.43
SRSF1-203ENST00000581497 A2MP01023 1474 aa12.34□□□□□ -0.43
SRSF1-203ENST00000581497 C6orf132Q5T0Z8 1188 aa12.34□□□□□ -0.43
SRSF1-203ENST00000581497 FBXO41Q8TF61 875 aa12.34□□□□□ -0.43
SRSF1-203ENST00000581497 RTEL1-TNFRSF6BF6WH68 1400 aa12.34□□□□□ -0.43
SRSF1-203ENST00000581497 SEPT9Q9UHD8 586 aaPredicted RBP12.33□□□□□ -0.44
SRSF1-203ENST00000581497 INO80Q9ULG1 1556 aaPredicted RBP12.32□□□□□ -0.44
SRSF1-203ENST00000581497 CAMK2BQ13554 666 aa12.32□□□□□ -0.44
SRSF1-203ENST00000581497 GGT6Q6P531 493 aa12.32□□□□□ -0.44
SRSF1-203ENST00000581497 WBP1LQ9NX94 342 aa12.32□□□□□ -0.44
SRSF1-203ENST00000581497 ZMYM3Q14202 1370 aa12.31□□□□□ -0.44
SRSF1-203ENST00000581497 DPYSL4O14531 572 aa12.31□□□□□ -0.44
SRSF1-203ENST00000581497 LRRC9Q6ZRR7 1453 aa12.31□□□□□ -0.44
SRSF1-203ENST00000581497 PREX1Q8TCU6 1659 aa12.31□□□□□ -0.44
SRSF1-203ENST00000581497 SUPT6HQ7KZ85 1726 aaKnown RBP12.31□□□□□ -0.44
SRSF1-203ENST00000581497 DHX29Q7Z478 1369 aaKnown RBP12.3□□□□□ -0.44
SRSF1-203ENST00000581497 CCDC141Q6ZP82 1450 aa12.3□□□□□ -0.44
SRSF1-203ENST00000581497 TRIM6-TRIM34B2RNG4 842 aa12.3□□□□□ -0.44
SRSF1-203ENST00000581497 TSPY4P0CV99 314 aa12.3□□□□□ -0.44
SRSF1-203ENST00000581497 TSPY10P0CW01 314 aa12.3□□□□□ -0.44
SRSF1-203ENST00000581497 PLXNC1O60486 1568 aa12.3□□□□□ -0.44
SRSF1-203ENST00000581497 NPATQ14207 1427 aa12.29□□□□□ -0.44
SRSF1-203ENST00000581497 CAMSAP2Q08AD1 1489 aa12.29□□□□□ -0.44
SRSF1-203ENST00000581497 MAP3K1Q13233 1512 aa12.29□□□□□ -0.44
SRSF1-203ENST00000581497 KANK4Q5T7N3 995 aaPredicted RBP12.29□□□□□ -0.44
SRSF1-203ENST00000581497 KCNC4Q03721 635 aa12.28□□□□□ -0.44
SRSF1-203ENST00000581497 FAM98CQ17RN3 349 aaKnown RBP12.28□□□□□ -0.44
SRSF1-203ENST00000581497 RBM33Q96EV2 1170 aaKnown RBP12.28□□□□□ -0.44
SRSF1-203ENST00000581497 SETD1BQ9UPS6 1966 aaKnown RBP12.28□□□□□ -0.44
SRSF1-203ENST00000581497 C3P01024 1663 aa12.28□□□□□ -0.44
SRSF1-203ENST00000581497 KIF3BO15066 747 aa12.27□□□□□ -0.45
SRSF1-203ENST00000581497 CERKQ8TCT0 537 aa12.26□□□□□ -0.45
SRSF1-203ENST00000581497 ADGBQ8N7X0 1667 aa12.26□□□□□ -0.45
SRSF1-203ENST00000581497 DDX12PQ92771 950 aa12.25□□□□□ -0.45
SRSF1-203ENST00000581497 LRCH3Q96II8 777 aa12.25□□□□□ -0.45
SRSF1-203ENST00000581497 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.25□□□□□ -0.45
SRSF1-203ENST00000581497 MIA2Q96PC5 1412 aa12.25□□□□□ -0.45
SRSF1-203ENST00000581497 MROH2AA6NES4 1674 aa12.25□□□□□ -0.45
SRSF1-203ENST00000581497 ARHGEF5Q12774 1597 aa12.24□□□□□ -0.45
SRSF1-203ENST00000581497 MYOM3Q5VTT5 1437 aa12.24□□□□□ -0.45
SRSF1-203ENST00000581497 TSR3Q9UJK0 312 aaKnown RBP12.24□□□□□ -0.45
SRSF1-203ENST00000581497 HPS5Q9UPZ3 1129 aa12.24□□□□□ -0.45
SRSF1-203ENST00000581497 PTPRTO14522 1441 aa12.23□□□□□ -0.45
SRSF1-203ENST00000581497 PTPRKQ15262 1439 aa12.23□□□□□ -0.45
SRSF1-203ENST00000581497 WASHC2CQ9Y4E1 1318 aa12.22□□□□□ -0.45
SRSF1-203ENST00000581497 NCOA1Q15788 1441 aa12.21□□□□□ -0.45
SRSF1-203ENST00000581497 Q6ZNB5 142 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms