RNA–Protein interactions for RNA: ENST00000581224.5

TRIM16-222, Transcript of tripartite motif containing 16, human

TSL 3

Gene TRIM16, Length 815 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-222	ENST00000581224	NPHP4	O75161	1426 aa	Predicted RBP	13.37	□□□□□ -0.27
TRIM16-222	ENST00000581224	ATAD2	Q6PL18	1390 aa		13.36	□□□□□ -0.27
TRIM16-222	ENST00000581224	SLIT1	O75093	1534 aa		13.36	□□□□□ -0.27
TRIM16-222	ENST00000581224	SOCS7	O14512	581 aa		13.36	□□□□□ -0.27
TRIM16-222	ENST00000581224	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.36	□□□□□ -0.27
TRIM16-222	ENST00000581224	TXNDC2	Q86VQ3	553 aa		13.36	□□□□□ -0.27
TRIM16-222	ENST00000581224	SENP3	Q9H4L4	574 aa	Predicted RBP	13.36	□□□□□ -0.27
TRIM16-222	ENST00000581224	PNISR	Q8TF01	805 aa	Known RBP	13.35	□□□□□ -0.27
TRIM16-222	ENST00000581224	BCAN	Q96GW7	911 aa		13.35	□□□□□ -0.27
TRIM16-222	ENST00000581224	ZBED9	Q6R2W3	1325 aa		13.35	□□□□□ -0.27
TRIM16-222	ENST00000581224	KNDC1	Q76NI1	1749 aa		13.34	□□□□□ -0.27
TRIM16-222	ENST00000581224	USP32	Q8NFA0	1604 aa		13.34	□□□□□ -0.27
TRIM16-222	ENST00000581224	ARHGAP23	Q9P227	1491 aa		13.34	□□□□□ -0.27
TRIM16-222	ENST00000581224	NSD2	O96028	1365 aa		13.33	□□□□□ -0.27
TRIM16-222	ENST00000581224	PLEKHG1	Q9ULL1	1385 aa		13.33	□□□□□ -0.27
TRIM16-222	ENST00000581224	SETD1A	O15047	1707 aa	Known RBP	13.33	□□□□□ -0.27
TRIM16-222	ENST00000581224	FAM135B	Q49AJ0	1406 aa		13.33	□□□□□ -0.28
TRIM16-222	ENST00000581224	LTK	P29376	864 aa		13.33	□□□□□ -0.28
TRIM16-222	ENST00000581224	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.33	□□□□□ -0.28
TRIM16-222	ENST00000581224	TERF2IP	Q9NYB0	399 aa		13.33	□□□□□ -0.28
TRIM16-222	ENST00000581224	STK26	Q9P289	416 aa		13.33	□□□□□ -0.28
TRIM16-222	ENST00000581224	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.33	□□□□□ -0.28
TRIM16-222	ENST00000581224	SCAF1	Q9H7N4	1312 aa	Known RBP	13.33	□□□□□ -0.28
TRIM16-222	ENST00000581224	MED14	O60244	1454 aa		13.32	□□□□□ -0.28
TRIM16-222	ENST00000581224	CC2D1B	Q5T0F9	858 aa	Known RBP	13.32	□□□□□ -0.28
TRIM16-222	ENST00000581224	CGNL1	Q0VF96	1302 aa		13.32	□□□□□ -0.28
TRIM16-222	ENST00000581224	TECPR2	O15040	1411 aa		13.31	□□□□□ -0.28
TRIM16-222	ENST00000581224	NEFL	P07196	543 aa		13.31	□□□□□ -0.28
TRIM16-222	ENST00000581224	PRAM1	Q96QH2	718 aa		13.31	□□□□□ -0.28
TRIM16-222	ENST00000581224	DIP2A	Q14689	1571 aa		13.31	□□□□□ -0.28
TRIM16-222	ENST00000581224	ANKRD36B	Q8N2N9	1353 aa		13.31	□□□□□ -0.28
TRIM16-222	ENST00000581224	SRPK2	P78362	688 aa	Known RBP	13.3	□□□□□ -0.28
TRIM16-222	ENST00000581224	CCDC184	Q52MB2	194 aa		13.3	□□□□□ -0.28
TRIM16-222	ENST00000581224	TULP4	Q9NRJ4	1543 aa		13.29	□□□□□ -0.28
TRIM16-222	ENST00000581224	NRXN3	Q9Y4C0	1643 aa		13.29	□□□□□ -0.28
TRIM16-222	ENST00000581224	CERK	Q8TCT0	537 aa		13.29	□□□□□ -0.28
TRIM16-222	ENST00000581224	LTBP4	Q8N2S1	1624 aa		13.28	□□□□□ -0.28
TRIM16-222	ENST00000581224	CNGB1	Q14028	1251 aa	Predicted RBP	13.28	□□□□□ -0.28
TRIM16-222	ENST00000581224	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.28	□□□□□ -0.28
TRIM16-222	ENST00000581224	NGEF	Q8N5V2	710 aa		13.28	□□□□□ -0.28
TRIM16-222	ENST00000581224	TBX22	Q9Y458	520 aa		13.28	□□□□□ -0.28
TRIM16-222	ENST00000581224	CPS1	P31327	1500 aa		13.28	□□□□□ -0.28
TRIM16-222	ENST00000581224	PPP2R1A	P30153	589 aa		13.27	□□□□□ -0.29
TRIM16-222	ENST00000581224	PDE3B	Q13370	1112 aa		13.27	□□□□□ -0.29
TRIM16-222	ENST00000581224	WDR43	Q15061	677 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
TRIM16-222	ENST00000581224	SLC26A8	Q96RN1	970 aa		13.26	□□□□□ -0.29
TRIM16-222	ENST00000581224	PIK3R4	Q99570	1358 aa		13.26	□□□□□ -0.29
TRIM16-222	ENST00000581224	SLC12A5	Q9H2X9	1139 aa		13.26	□□□□□ -0.29
TRIM16-222	ENST00000581224	NSD3	Q9BZ95	1437 aa		13.25	□□□□□ -0.29
TRIM16-222	ENST00000581224	MORC1	Q86VD1	984 aa		13.25	□□□□□ -0.29
TRIM16-222	ENST00000581224	PELP1	Q8IZL8	1130 aa	Known RBP	13.25	□□□□□ -0.29
TRIM16-222	ENST00000581224	CDK19	Q9BWU1	502 aa		13.25	□□□□□ -0.29
TRIM16-222	ENST00000581224	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.24	□□□□□ -0.29
TRIM16-222	ENST00000581224	ERICH6B	Q5W0A0	696 aa		13.24	□□□□□ -0.29
TRIM16-222	ENST00000581224	CARD14	Q9BXL6	1004 aa		13.24	□□□□□ -0.29
TRIM16-222	ENST00000581224	STRCP1	A6NGW2	1772 aa		13.24	□□□□□ -0.29
TRIM16-222	ENST00000581224	ATP7B	P35670	1465 aa		13.23	□□□□□ -0.29
TRIM16-222	ENST00000581224	CFAP53	Q96M91	514 aa		13.23	□□□□□ -0.29
TRIM16-222	ENST00000581224	CABP2	Q9NPB3	220 aa		13.23	□□□□□ -0.29
TRIM16-222	ENST00000581224	ADAMTS13	Q76LX8	1427 aa		13.22	□□□□□ -0.29
TRIM16-222	ENST00000581224	MET	P08581	1390 aa		13.22	□□□□□ -0.29
TRIM16-222	ENST00000581224	WASL	O00401	505 aa	Predicted RBP	13.22	□□□□□ -0.29
TRIM16-222	ENST00000581224	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
TRIM16-222	ENST00000581224	POLR3A	O14802	1390 aa	Predicted RBP	13.21	□□□□□ -0.29
TRIM16-222	ENST00000581224	ZNF692	Q9BU19	519 aa	Predicted RBP	13.21	□□□□□ -0.29
TRIM16-222	ENST00000581224	ANKRD26	Q9UPS8	1709 aa		13.21	□□□□□ -0.3
TRIM16-222	ENST00000581224	ADGRB2	O60241	1585 aa		13.2	□□□□□ -0.3
TRIM16-222	ENST00000581224	BLM	P54132	1417 aa	Predicted RBP	13.2	□□□□□ -0.3
TRIM16-222	ENST00000581224	SMG6	Q86US8	1419 aa	Known RBP	13.2	□□□□□ -0.3
TRIM16-222	ENST00000581224	CCDC61	Q9Y6R9	512 aa		13.19	□□□□□ -0.3
TRIM16-222	ENST00000581224	PTCH1	Q13635	1447 aa		13.19	□□□□□ -0.3
TRIM16-222	ENST00000581224	IQSEC2	Q5JU85	1478 aa		13.18	□□□□□ -0.3
TRIM16-222	ENST00000581224	WAPL	Q7Z5K2	1190 aa		13.18	□□□□□ -0.3
TRIM16-222	ENST00000581224		A0A1W2PP64	1363 aa		13.18	□□□□□ -0.3
TRIM16-222	ENST00000581224	UBAP1L	F5GYI3	381 aa		13.17	□□□□□ -0.3
TRIM16-222	ENST00000581224	KIF20B	Q96Q89	1820 aa		13.17	□□□□□ -0.3
TRIM16-222	ENST00000581224	CHD2	O14647	1828 aa	Known RBP	13.16	□□□□□ -0.3
TRIM16-222	ENST00000581224	KCNA6	P17658	529 aa		13.16	□□□□□ -0.3
TRIM16-222	ENST00000581224	NCBP3	Q53F19	620 aa	Known RBP	13.16	□□□□□ -0.3
TRIM16-222	ENST00000581224	PNN	Q9H307	717 aa	Known RBP	13.16	□□□□□ -0.3
TRIM16-222	ENST00000581224	CABP1	Q9NZU7	370 aa		13.16	□□□□□ -0.3
TRIM16-222	ENST00000581224	NUDC	Q9Y266	331 aa		13.16	□□□□□ -0.3
TRIM16-222	ENST00000581224	LRRC7	Q96NW7	1537 aa		13.16	□□□□□ -0.3
TRIM16-222	ENST00000581224	ITSN1	Q15811	1721 aa		13.16	□□□□□ -0.3
TRIM16-222	ENST00000581224	NWD1	Q149M9	1564 aa		13.15	□□□□□ -0.3
TRIM16-222	ENST00000581224	EDC4	Q6P2E9	1401 aa	Known RBP	13.15	□□□□□ -0.3
TRIM16-222	ENST00000581224	PROSER2	Q86WR7	435 aa	Predicted RBP	13.15	□□□□□ -0.3
TRIM16-222	ENST00000581224	NUDT16	Q96DE0	195 aa	Known RBP	13.15	□□□□□ -0.3
TRIM16-222	ENST00000581224	RBM33	Q96EV2	1170 aa	Known RBP	13.15	□□□□□ -0.3
TRIM16-222	ENST00000581224	AMOTL2	Q9Y2J4	779 aa		13.15	□□□□□ -0.3
TRIM16-222	ENST00000581224	PPIP5K1	Q6PFW1	1433 aa		13.14	□□□□□ -0.31
TRIM16-222	ENST00000581224	XIRP1	Q702N8	1843 aa	Known RBP	13.14	□□□□□ -0.31
TRIM16-222	ENST00000581224	ADAMTS8	Q9UP79	889 aa		13.14	□□□□□ -0.31
TRIM16-222	ENST00000581224	NKTR	P30414	1462 aa	Known RBP	13.14	□□□□□ -0.31
TRIM16-222	ENST00000581224	CPSF1	Q10570	1443 aa	Known RBP	13.13	□□□□□ -0.31
TRIM16-222	ENST00000581224	CDC42BPG	Q6DT37	1551 aa		13.13	□□□□□ -0.31
TRIM16-222	ENST00000581224	ROBO2	Q9HCK4	1378 aa		13.13	□□□□□ -0.31
TRIM16-222	ENST00000581224	PLEKHH1	Q9ULM0	1364 aa		13.13	□□□□□ -0.31
TRIM16-222	ENST00000581224	C14orf37	Q86TY3	774 aa		13.13	□□□□□ -0.31
TRIM16-222	ENST00000581224	XRN1	Q8IZH2	1706 aa	Known RBP	13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 200.3 ms