RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 NUTM2BA6NNL0 878 aaPredicted RBP9.44□□□□□ -0.9
NF1-220ENST00000581113 NUTM2EB1AL46 878 aaPredicted RBP9.44□□□□□ -0.9
NF1-220ENST00000581113 ZPR1O75312 459 aa9.44□□□□□ -0.9
NF1-220ENST00000581113 NUTM2DQ5VT03 806 aaPredicted RBP9.44□□□□□ -0.9
NF1-220ENST00000581113 RNF19BQ6ZMZ0 732 aa9.44□□□□□ -0.9
NF1-220ENST00000581113 NUTM2AQ8IVF1 878 aaPredicted RBP9.44□□□□□ -0.9
NF1-220ENST00000581113 CABLES1Q8TDN4 633 aa9.44□□□□□ -0.9
NF1-220ENST00000581113 ZNF516Q92618 1163 aa9.44□□□□□ -0.9
NF1-220ENST00000581113 ZBTB3Q9H5J0 574 aa9.44□□□□□ -0.9
NF1-220ENST00000581113 HRCP23327 699 aa9.43□□□□□ -0.9
NF1-220ENST00000581113 MTMR2Q13614 643 aa9.43□□□□□ -0.9
NF1-220ENST00000581113 TUSC1Q2TAM9 212 aa9.43□□□□□ -0.9
NF1-220ENST00000581113 PLSCR2Q9NRY7 297 aa9.43□□□□□ -0.9
NF1-220ENST00000581113 TLL1O43897 1013 aa9.42□□□□□ -0.9
NF1-220ENST00000581113 FMNL1O95466 1100 aaPredicted RBP9.42□□□□□ -0.9
NF1-220ENST00000581113 PRPF38BQ5VTL8 546 aaKnown RBP9.42□□□□□ -0.9
NF1-220ENST00000581113 LILRB3O75022 631 aa9.41□□□□□ -0.9
NF1-220ENST00000581113 BRICD5Q6PL45 260 aa9.41□□□□□ -0.9
NF1-220ENST00000581113 THAP11Q96EK4 314 aa9.41□□□□□ -0.9
NF1-220ENST00000581113 SALL2Q9Y467 1007 aaPredicted RBP9.41□□□□□ -0.9
NF1-220ENST00000581113 KCNC4Q03721 635 aa9.4□□□□□ -0.9
NF1-220ENST00000581113 SPSB2Q99619 263 aa9.4□□□□□ -0.9
NF1-220ENST00000581113 ITGBL1O95965 494 aaPredicted RBP9.4□□□□□ -0.91
NF1-220ENST00000581113 FBXO31Q5XUX0 539 aaPredicted RBP9.4□□□□□ -0.91
NF1-220ENST00000581113 USB1Q9BQ65 265 aaKnown RBP9.4□□□□□ -0.91
NF1-220ENST00000581113 SPDYE5A6NIY4 337 aa9.39□□□□□ -0.91
NF1-220ENST00000581113 RTL5Q5HYW3 569 aaPredicted RBP9.39□□□□□ -0.91
NF1-220ENST00000581113 RETREG3Q86VR2 466 aa9.39□□□□□ -0.91
NF1-220ENST00000581113 NKX2-3Q8TAU0 364 aa9.38□□□□□ -0.91
NF1-220ENST00000581113 TSC1Q92574 1164 aa9.38□□□□□ -0.91
NF1-220ENST00000581113 ADH1BP00325 375 aa9.37□□□□□ -0.91
NF1-220ENST00000581113 PPP2R2DQ66LE6 453 aa9.37□□□□□ -0.91
NF1-220ENST00000581113 PRR7Q8TB68 274 aa9.37□□□□□ -0.91
NF1-220ENST00000581113 CFAP99D6REC4 459 aa9.36□□□□□ -0.91
NF1-220ENST00000581113 RFC5P40937 340 aa9.36□□□□□ -0.91
NF1-220ENST00000581113 FAM160A2Q8N612 972 aaPredicted RBP9.34□□□□□ -0.91
NF1-220ENST00000581113 PRDM9Q9NQV7 894 aa9.34□□□□□ -0.91
NF1-220ENST00000581113 MSS51Q4VC12 460 aa9.34□□□□□ -0.91
NF1-220ENST00000581113 HELBQ8NG08 1087 aaPredicted RBP9.34□□□□□ -0.91
NF1-220ENST00000581113 SLC6A16Q9GZN6 736 aa9.34□□□□□ -0.91
NF1-220ENST00000581113 AP1G2O75843 785 aa9.33□□□□□ -0.92
NF1-220ENST00000581113 PLA2G2EQ9NZK7 142 aa9.33□□□□□ -0.92
NF1-220ENST00000581113 S1PR4O95977 384 aa9.32□□□□□ -0.92
NF1-220ENST00000581113 GTF3C3Q9Y5Q9 886 aa9.32□□□□□ -0.92
NF1-220ENST00000581113 TMEM259Q4ZIN3 620 aa9.31□□□□□ -0.92
NF1-220ENST00000581113 JUNDP17535 347 aa9.3□□□□□ -0.92
NF1-220ENST00000581113 CTDSPL2Q05D32 466 aa9.29□□□□□ -0.92
NF1-220ENST00000581113 DESI1Q6ICB0 168 aa9.29□□□□□ -0.92
NF1-220ENST00000581113 DXOO77932 396 aaKnown RBP9.28□□□□□ -0.92
NF1-220ENST00000581113 MMP16P51512 607 aa9.28□□□□□ -0.92
NF1-220ENST00000581113 USP17L8P0C7I0 530 aa9.28□□□□□ -0.92
NF1-220ENST00000581113 GGCXP38435 758 aa9.28□□□□□ -0.92
NF1-220ENST00000581113 PER1O15534 1290 aaPredicted RBP9.27□□□□□ -0.93
NF1-220ENST00000581113 PPP1R18Q6NYC8 613 aa9.27□□□□□ -0.93
NF1-220ENST00000581113 PPEF1O14829 653 aaPredicted RBP9.26□□□□□ -0.93
NF1-220ENST00000581113 IFFO2Q5TF58 517 aa9.26□□□□□ -0.93
NF1-220ENST00000581113 LYPD8Q6UX82 237 aa9.26□□□□□ -0.93
NF1-220ENST00000581113 PTPRNQ16849 979 aa9.25□□□□□ -0.93
NF1-220ENST00000581113 CCDC24Q8N4L8 307 aa9.25□□□□□ -0.93
NF1-220ENST00000581113 BANK1Q8NDB2 785 aa9.25□□□□□ -0.93
NF1-220ENST00000581113 LRRN4Q8WUT4 740 aa9.25□□□□□ -0.93
NF1-220ENST00000581113 NUDT12Q9BQG2 462 aa9.25□□□□□ -0.93
NF1-220ENST00000581113 FCF1Q9Y324 198 aaKnown RBP9.25□□□□□ -0.93
NF1-220ENST00000581113 RNF223E7ERA6 249 aa9.24□□□□□ -0.93
NF1-220ENST00000581113 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.24□□□□□ -0.93
NF1-220ENST00000581113 SNRKQ9NRH2 765 aa9.24□□□□□ -0.93
NF1-220ENST00000581113 CCNYL3P0C7X3 344 aa9.23□□□□□ -0.93
NF1-220ENST00000581113 CTHP32929 405 aa9.21□□□□□ -0.93
NF1-220ENST00000581113 MCM6Q14566 821 aa9.21□□□□□ -0.93
NF1-220ENST00000581113 HMX1Q9NP08 348 aaPredicted RBP9.21□□□□□ -0.93
NF1-220ENST00000581113 FLIIQ13045 1269 aa9.21□□□□□ -0.94
NF1-220ENST00000581113 ANKLE1Q8NAG6 615 aa9.21□□□□□ -0.94
NF1-220ENST00000581113 MTMR14Q8NCE2 650 aa9.21□□□□□ -0.94
NF1-220ENST00000581113 MAP10Q9P2G4 905 aa9.21□□□□□ -0.94
NF1-220ENST00000581113 A0A0G2JS52 829 aa9.2□□□□□ -0.94
NF1-220ENST00000581113 EVA1BQ9NVM1 165 aa9.2□□□□□ -0.94
NF1-220ENST00000581113 F12P00748 615 aaPredicted RBP9.19□□□□□ -0.94
NF1-220ENST00000581113 KCNH2Q12809 1159 aa9.19□□□□□ -0.94
NF1-220ENST00000581113 NR6A1Q15406 480 aa9.19□□□□□ -0.94
NF1-220ENST00000581113 APBB1O00213 710 aa9.17□□□□□ -0.94
NF1-220ENST00000581113 PLA2G2CQ5R387 149 aa9.17□□□□□ -0.94
NF1-220ENST00000581113 PTCRAQ6ISU1 281 aaPredicted RBP9.17□□□□□ -0.94
NF1-220ENST00000581113 EPS8L1Q8TE68 723 aa9.17□□□□□ -0.94
NF1-220ENST00000581113 GJD4Q96KN9 370 aaPredicted RBP9.16□□□□□ -0.94
NF1-220ENST00000581113 ZBTB24O43167 697 aaPredicted RBP9.15□□□□□ -0.94
NF1-220ENST00000581113 TRIM34Q9BYJ4 488 aa9.15□□□□□ -0.94
NF1-220ENST00000581113 UNC93B1Q9H1C4 597 aa9.15□□□□□ -0.94
NF1-220ENST00000581113 UBTFP17480 764 aaKnown RBP9.15□□□□□ -0.95
NF1-220ENST00000581113 SOCS7O14512 581 aa9.14□□□□□ -0.95
NF1-220ENST00000581113 PRM3Q9NNZ6 103 aa9.13□□□□□ -0.95
NF1-220ENST00000581113 NDUFB9Q9Y6M9 179 aa9.13□□□□□ -0.95
NF1-220ENST00000581113 PNMA1Q8ND90 353 aa9.11□□□□□ -0.95
NF1-220ENST00000581113 GDPD2Q9HCC8 539 aa9.11□□□□□ -0.95
NF1-220ENST00000581113 FKBPLQ9UIM3 349 aa9.11□□□□□ -0.95
NF1-220ENST00000581113 TBC1D2BQ9UPU7 963 aa9.11□□□□□ -0.95
NF1-220ENST00000581113 RAD21O60216 631 aa9.1□□□□□ -0.95
NF1-220ENST00000581113 SLC19A1P41440 591 aa9.1□□□□□ -0.95
NF1-220ENST00000581113 TRIM32Q13049 653 aa9.1□□□□□ -0.95
NF1-220ENST00000581113 LIAT1Q6ZQX7 453 aa9.1□□□□□ -0.95
NF1-220ENST00000581113 ARMC2Q8NEN0 867 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms