RNA–Protein interactions for RNA: ENST00000581057.2

TRAPPC8-208, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-208ENST00000581057 SLC27A5Q9Y2P5 690 aa13.68□□□□□ -0.22
TRAPPC8-208ENST00000581057 MTMR2Q13614 643 aa13.67□□□□□ -0.22
TRAPPC8-208ENST00000581057 PPP2R2DQ66LE6 453 aa13.67□□□□□ -0.22
TRAPPC8-208ENST00000581057 PRPF38BQ5VTL8 546 aaKnown RBP13.66□□□□□ -0.22
TRAPPC8-208ENST00000581057 BLOC1S3Q6QNY0 202 aa13.65□□□□□ -0.22
TRAPPC8-208ENST00000581057 ERICH6Q7L0X2 663 aa13.65□□□□□ -0.22
TRAPPC8-208ENST00000581057 TSC1Q92574 1164 aa13.65□□□□□ -0.22
TRAPPC8-208ENST00000581057 COPS2P61201 443 aa13.64□□□□□ -0.23
TRAPPC8-208ENST00000581057 AP1G2O75843 785 aa13.63□□□□□ -0.23
TRAPPC8-208ENST00000581057 PCDH10Q9P2E7 1040 aa13.63□□□□□ -0.23
TRAPPC8-208ENST00000581057 NR1I2O75469 434 aa13.62□□□□□ -0.23
TRAPPC8-208ENST00000581057 FLIIQ13045 1269 aa13.62□□□□□ -0.23
TRAPPC8-208ENST00000581057 Q3C1V9 767 aa13.62□□□□□ -0.23
TRAPPC8-208ENST00000581057 SCUBE3Q8IX30 993 aa13.62□□□□□ -0.23
TRAPPC8-208ENST00000581057 TMEM259Q4ZIN3 620 aa13.61□□□□□ -0.23
TRAPPC8-208ENST00000581057 RNF19BQ6ZMZ0 732 aa13.6□□□□□ -0.23
TRAPPC8-208ENST00000581057 SPNS2Q8IVW8 549 aa13.6□□□□□ -0.23
TRAPPC8-208ENST00000581057 NYAP1Q6ZVC0 841 aa13.59□□□□□ -0.23
TRAPPC8-208ENST00000581057 SPDYE5A6NIY4 337 aa13.58□□□□□ -0.24
TRAPPC8-208ENST00000581057 RNF166Q96A37 237 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC8-208ENST00000581057 CFAP99D6REC4 459 aa13.57□□□□□ -0.24
TRAPPC8-208ENST00000581057 PRR7Q8TB68 274 aa13.57□□□□□ -0.24
TRAPPC8-208ENST00000581057 SNRKQ9NRH2 765 aa13.57□□□□□ -0.24
TRAPPC8-208ENST00000581057 FMNL1O95466 1100 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC8-208ENST00000581057 MCM6Q14566 821 aa13.56□□□□□ -0.24
TRAPPC8-208ENST00000581057 RETREG3Q86VR2 466 aa13.55□□□□□ -0.24
TRAPPC8-208ENST00000581057 BANK1Q8NDB2 785 aa13.55□□□□□ -0.24
TRAPPC8-208ENST00000581057 HELBQ8NG08 1087 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC8-208ENST00000581057 MTRQ99707 1265 aa13.55□□□□□ -0.24
TRAPPC8-208ENST00000581057 CTDSPL2Q05D32 466 aa13.54□□□□□ -0.24
TRAPPC8-208ENST00000581057 BRICD5Q6PL45 260 aa13.54□□□□□ -0.24
TRAPPC8-208ENST00000581057 USP17L8P0C7I0 530 aa13.53□□□□□ -0.24
TRAPPC8-208ENST00000581057 UBTFP17480 764 aaKnown RBP13.53□□□□□ -0.24
TRAPPC8-208ENST00000581057 USB1Q9BQ65 265 aaKnown RBP13.53□□□□□ -0.24
TRAPPC8-208ENST00000581057 TLL1O43897 1013 aa13.51□□□□□ -0.25
TRAPPC8-208ENST00000581057 THAP11Q96EK4 314 aa13.51□□□□□ -0.25
TRAPPC8-208ENST00000581057 SALL2Q9Y467 1007 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC8-208ENST00000581057 ZPR1O75312 459 aa13.5□□□□□ -0.25
TRAPPC8-208ENST00000581057 ZNF516Q92618 1163 aa13.5□□□□□ -0.25
TRAPPC8-208ENST00000581057 SPSB2Q99619 263 aa13.5□□□□□ -0.25
TRAPPC8-208ENST00000581057 HCSTQ9UBK5 93 aa13.49□□□□□ -0.25
TRAPPC8-208ENST00000581057 TJAP1Q5JTD0 557 aa13.48□□□□□ -0.25
TRAPPC8-208ENST00000581057 CLUAP1Q96AJ1 413 aa13.48□□□□□ -0.25
TRAPPC8-208ENST00000581057 ZMYND15Q9H091 742 aa13.48□□□□□ -0.25
TRAPPC8-208ENST00000581057 IL21Q9HBE4 155 aa13.48□□□□□ -0.25
TRAPPC8-208ENST00000581057 MTMR14Q8NCE2 650 aa13.47□□□□□ -0.25
TRAPPC8-208ENST00000581057 LRRN4Q8WUT4 740 aa13.47□□□□□ -0.25
TRAPPC8-208ENST00000581057 PER1O15534 1290 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC8-208ENST00000581057 FAM160A2Q8N612 972 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC8-208ENST00000581057 POM121Q96HA1 1249 aa13.44□□□□□ -0.26
TRAPPC8-208ENST00000581057 HMX1Q9NP08 348 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC8-208ENST00000581057 RAD21O60216 631 aa13.43□□□□□ -0.26
TRAPPC8-208ENST00000581057 ADH1BP00325 375 aa13.43□□□□□ -0.26
TRAPPC8-208ENST00000581057 PRDM9Q9NQV7 894 aa13.43□□□□□ -0.26
TRAPPC8-208ENST00000581057 DESI1Q6ICB0 168 aa13.42□□□□□ -0.26
TRAPPC8-208ENST00000581057 JUNDP17535 347 aa13.41□□□□□ -0.26
TRAPPC8-208ENST00000581057 MSS51Q4VC12 460 aa13.41□□□□□ -0.26
TRAPPC8-208ENST00000581057 NKX2-3Q8TAU0 364 aa13.41□□□□□ -0.26
TRAPPC8-208ENST00000581057 APBB1O00213 710 aa13.4□□□□□ -0.26
TRAPPC8-208ENST00000581057 MMRN1Q13201 1228 aa13.4□□□□□ -0.26
TRAPPC8-208ENST00000581057 SUPT5HO00267 1087 aaKnown RBP13.39□□□□□ -0.27
TRAPPC8-208ENST00000581057 LYPD8Q6UX82 237 aa13.39□□□□□ -0.27
TRAPPC8-208ENST00000581057 GDPD2Q9HCC8 539 aa13.39□□□□□ -0.27
TRAPPC8-208ENST00000581057 PRM3Q9NNZ6 103 aa13.39□□□□□ -0.27
TRAPPC8-208ENST00000581057 COG6Q9Y2V7 657 aa13.39□□□□□ -0.27
TRAPPC8-208ENST00000581057 NR6A1Q15406 480 aa13.38□□□□□ -0.27
TRAPPC8-208ENST00000581057 SLC6A16Q9GZN6 736 aa13.38□□□□□ -0.27
TRAPPC8-208ENST00000581057 EPS8L1Q8TE68 723 aa13.37□□□□□ -0.27
TRAPPC8-208ENST00000581057 TBC1D2BQ9UPU7 963 aa13.37□□□□□ -0.27
TRAPPC8-208ENST00000581057 ABL2P42684 1182 aa13.36□□□□□ -0.27
TRAPPC8-208ENST00000581057 KCNC4Q03721 635 aa13.36□□□□□ -0.27
TRAPPC8-208ENST00000581057 GJD4Q96KN9 370 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC8-208ENST00000581057 DXOO77932 396 aaKnown RBP13.35□□□□□ -0.27
TRAPPC8-208ENST00000581057 CTHP32929 405 aa13.35□□□□□ -0.27
TRAPPC8-208ENST00000581057 TRIM34Q9BYJ4 488 aa13.35□□□□□ -0.27
TRAPPC8-208ENST00000581057 A6NJR5 290 aa13.34□□□□□ -0.27
TRAPPC8-208ENST00000581057 S1PR4O95977 384 aa13.34□□□□□ -0.27
TRAPPC8-208ENST00000581057 PTPRNQ16849 979 aa13.34□□□□□ -0.27
TRAPPC8-208ENST00000581057 CCDC24Q8N4L8 307 aa13.34□□□□□ -0.27
TRAPPC8-208ENST00000581057 NDUFB9Q9Y6M9 179 aa13.34□□□□□ -0.27
TRAPPC8-208ENST00000581057 MMP16P51512 607 aa13.33□□□□□ -0.28
TRAPPC8-208ENST00000581057 PROSER2Q86WR7 435 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC8-208ENST00000581057 NUDT12Q9BQG2 462 aa13.33□□□□□ -0.28
TRAPPC8-208ENST00000581057 MAP10Q9P2G4 905 aa13.33□□□□□ -0.28
TRAPPC8-208ENST00000581057 SOCS7O14512 581 aa13.32□□□□□ -0.28
TRAPPC8-208ENST00000581057 CCNYL3P0C7X3 344 aa13.31□□□□□ -0.28
TRAPPC8-208ENST00000581057 ITGBL1O95965 494 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC8-208ENST00000581057 TRAK2O60296 914 aa13.28□□□□□ -0.28
TRAPPC8-208ENST00000581057 F12P00748 615 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC8-208ENST00000581057 PPEF1O14829 653 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC8-208ENST00000581057 WWC1Q8IX03 1113 aa13.27□□□□□ -0.29
TRAPPC8-208ENST00000581057 EVA1BQ9NVM1 165 aa13.27□□□□□ -0.29
TRAPPC8-208ENST00000581057 KCNH2Q12809 1159 aa13.26□□□□□ -0.29
TRAPPC8-208ENST00000581057 FCF1Q9Y324 198 aaKnown RBP13.26□□□□□ -0.29
TRAPPC8-208ENST00000581057 ARID3CA6NKF2 412 aa13.25□□□□□ -0.29
TRAPPC8-208ENST00000581057 ZNF330Q9Y3S2 320 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC8-208ENST00000581057 PNMA1Q8ND90 353 aa13.24□□□□□ -0.29
TRAPPC8-208ENST00000581057 ZNF777Q9ULD5 760 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC8-208ENST00000581057 FNBP4Q8N3X1 1017 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC8-208ENST00000581057 IRF5Q13568 498 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms