RNA–Protein interactions for RNA: ENST00000580866.2

EPB41L3-221, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

TSL 5

Gene EPB41L3, Length 489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-221ENST00000580866 GPHNQ9NQX3 736 aaPredicted RBP6.9□□□□□ -1.3
EPB41L3-221ENST00000580866 CDK13Q14004 1512 aaKnown RBP6.9□□□□□ -1.31
EPB41L3-221ENST00000580866 KIF3CO14782 793 aa6.89□□□□□ -1.31
EPB41L3-221ENST00000580866 ANKRD13DQ6ZTN6 518 aa6.89□□□□□ -1.31
EPB41L3-221ENST00000580866 CRISPLD2Q9H0B8 497 aa6.89□□□□□ -1.31
EPB41L3-221ENST00000580866 WDR70Q9NW82 654 aa6.89□□□□□ -1.31
EPB41L3-221ENST00000580866 HCSTQ9UBK5 93 aa6.89□□□□□ -1.31
EPB41L3-221ENST00000580866 CLTCQ00610 1675 aaKnown RBP6.89□□□□□ -1.31
EPB41L3-221ENST00000580866 XIRP1Q702N8 1843 aaKnown RBP6.88□□□□□ -1.31
EPB41L3-221ENST00000580866 MYO5CQ9NQX4 1742 aa6.88□□□□□ -1.31
EPB41L3-221ENST00000580866 KDM5DQ9BY66 1539 aa6.88□□□□□ -1.31
EPB41L3-221ENST00000580866 RGS20O76081 388 aa6.88□□□□□ -1.31
EPB41L3-221ENST00000580866 DSG2Q14126 1118 aa6.88□□□□□ -1.31
EPB41L3-221ENST00000580866 MEX3CQ5U5Q3 659 aaKnown RBP6.88□□□□□ -1.31
EPB41L3-221ENST00000580866 DDX27Q96GQ7 796 aaKnown RBP6.88□□□□□ -1.31
EPB41L3-221ENST00000580866 KIDINS220Q9ULH0 1771 aa6.87□□□□□ -1.31
EPB41L3-221ENST00000580866 IQGAP1P46940 1657 aa6.87□□□□□ -1.31
EPB41L3-221ENST00000580866 ROBO1Q9Y6N7 1651 aa6.87□□□□□ -1.31
EPB41L3-221ENST00000580866 FGD6Q6ZV73 1430 aa6.87□□□□□ -1.31
EPB41L3-221ENST00000580866 NUTM2BA6NNL0 878 aaPredicted RBP6.87□□□□□ -1.31
EPB41L3-221ENST00000580866 NUTM2EB1AL46 878 aaPredicted RBP6.87□□□□□ -1.31
EPB41L3-221ENST00000580866 RBM6P78332 1123 aaKnown RBP6.87□□□□□ -1.31
EPB41L3-221ENST00000580866 DOK7Q18PE1 504 aa6.87□□□□□ -1.31
EPB41L3-221ENST00000580866 NUTM2DQ5VT03 806 aaPredicted RBP6.87□□□□□ -1.31
EPB41L3-221ENST00000580866 NUTM2AQ8IVF1 878 aaPredicted RBP6.87□□□□□ -1.31
EPB41L3-221ENST00000580866 PLPP6Q8IY26 295 aa6.87□□□□□ -1.31
EPB41L3-221ENST00000580866 LRP5O75197 1615 aa6.87□□□□□ -1.31
EPB41L3-221ENST00000580866 SAMD9Q5K651 1589 aa6.86□□□□□ -1.31
EPB41L3-221ENST00000580866 ABCC1P33527 1531 aa6.86□□□□□ -1.31
EPB41L3-221ENST00000580866 ATAD2Q6PL18 1390 aa6.86□□□□□ -1.31
EPB41L3-221ENST00000580866 YY1P25490 414 aa6.86□□□□□ -1.31
EPB41L3-221ENST00000580866 FOXK1P85037 733 aa6.86□□□□□ -1.31
EPB41L3-221ENST00000580866 PPP1R15BQ5SWA1 713 aa6.86□□□□□ -1.31
EPB41L3-221ENST00000580866 GGT6Q6P531 493 aa6.86□□□□□ -1.31
EPB41L3-221ENST00000580866 TNRQ92752 1358 aa6.85□□□□□ -1.31
EPB41L3-221ENST00000580866 SLAIN2Q9P270 581 aa6.85□□□□□ -1.31
EPB41L3-221ENST00000580866 LRP6O75581 1613 aa6.85□□□□□ -1.31
EPB41L3-221ENST00000580866 FAM135AQ9P2D6 1515 aa6.85□□□□□ -1.31
EPB41L3-221ENST00000580866 EP400Q96L91 3159 aa6.85□□□□□ -1.31
EPB41L3-221ENST00000580866 LRRC9Q6ZRR7 1453 aa6.85□□□□□ -1.31
EPB41L3-221ENST00000580866 LSM11P83369 360 aaKnown RBP eCLIP6.84□□□□□ -1.31
EPB41L3-221ENST00000580866 FBXO31Q5XUX0 539 aaPredicted RBP6.84□□□□□ -1.31
EPB41L3-221ENST00000580866 NGLY1Q96IV0 654 aa6.84□□□□□ -1.31
EPB41L3-221ENST00000580866 QTRT2Q9H974 415 aaKnown RBP6.84□□□□□ -1.31
EPB41L3-221ENST00000580866 CDK11AQ9UQ88 783 aaPredicted RBP6.84□□□□□ -1.31
EPB41L3-221ENST00000580866 ARHGAP5Q13017 1502 aa6.84□□□□□ -1.31
EPB41L3-221ENST00000580866 NLRP1Q9C000 1473 aa6.84□□□□□ -1.31
EPB41L3-221ENST00000580866 PHLPP1O60346 1717 aa6.84□□□□□ -1.31
EPB41L3-221ENST00000580866 RGS12O14924 1447 aa6.84□□□□□ -1.32
EPB41L3-221ENST00000580866 UGGT1Q9NYU2 1555 aa6.83□□□□□ -1.32
EPB41L3-221ENST00000580866 SUPT5HO00267 1087 aaKnown RBP6.83□□□□□ -1.32
EPB41L3-221ENST00000580866 MFSD10Q14728 455 aa6.83□□□□□ -1.32
EPB41L3-221ENST00000580866 PRXQ9BXM0 1461 aa6.83□□□□□ -1.32
EPB41L3-221ENST00000580866 MIA2Q96PC5 1412 aa6.83□□□□□ -1.32
EPB41L3-221ENST00000580866 ITSN2Q9NZM3 1697 aa6.82□□□□□ -1.32
EPB41L3-221ENST00000580866 KDM2AQ9Y2K7 1162 aa6.82□□□□□ -1.32
EPB41L3-221ENST00000580866 TMEM94Q12767 1356 aa6.82□□□□□ -1.32
EPB41L3-221ENST00000580866 AFF2P51816 1311 aa6.81□□□□□ -1.32
EPB41L3-221ENST00000580866 ZC3H13Q5T200 1668 aaKnown RBP6.81□□□□□ -1.32
EPB41L3-221ENST00000580866 RIMBP2O15034 1052 aa6.81□□□□□ -1.32
EPB41L3-221ENST00000580866 VSIG10Q8N0Z9 540 aa6.81□□□□□ -1.32
EPB41L3-221ENST00000580866 ATP7AQ04656 1500 aa6.81□□□□□ -1.32
EPB41L3-221ENST00000580866 COL16A1Q07092 1604 aaPredicted RBP6.8□□□□□ -1.32
EPB41L3-221ENST00000580866 KCNA6P17658 529 aa6.8□□□□□ -1.32
EPB41L3-221ENST00000580866 GPR153Q6NV75 609 aa6.8□□□□□ -1.32
EPB41L3-221ENST00000580866 CDC42BPBQ9Y5S2 1711 aa6.8□□□□□ -1.32
EPB41L3-221ENST00000580866 A2MP01023 1474 aa6.79□□□□□ -1.32
EPB41L3-221ENST00000580866 PZPP20742 1482 aa6.79□□□□□ -1.32
EPB41L3-221ENST00000580866 SPAG9O60271 1321 aaKnown RBP6.79□□□□□ -1.32
EPB41L3-221ENST00000580866 PLXNC1O60486 1568 aa6.79□□□□□ -1.32
EPB41L3-221ENST00000580866 E2F4Q16254 413 aa6.79□□□□□ -1.32
EPB41L3-221ENST00000580866 ZSWIM6Q9HCJ5 1215 aa6.79□□□□□ -1.32
EPB41L3-221ENST00000580866 SHPRHQ149N8 1683 aa6.79□□□□□ -1.32
EPB41L3-221ENST00000580866 SLC24A1O60721 1099 aa6.78□□□□□ -1.32
EPB41L3-221ENST00000580866 ARSIQ5FYB1 569 aa6.78□□□□□ -1.32
EPB41L3-221ENST00000580866 PROSER2Q86WR7 435 aaPredicted RBP6.78□□□□□ -1.32
EPB41L3-221ENST00000580866 SAMD9LQ8IVG5 1584 aa6.78□□□□□ -1.32
EPB41L3-221ENST00000580866 ABCC3O15438 1527 aa6.77□□□□□ -1.33
EPB41L3-221ENST00000580866 SENP3-EIF4A1A0A087X0R7 540 aa6.77□□□□□ -1.33
EPB41L3-221ENST00000580866 TBC1D12O60347 775 aa6.77□□□□□ -1.33
EPB41L3-221ENST00000580866 HRCP23327 699 aa6.77□□□□□ -1.33
EPB41L3-221ENST00000580866 LTKP29376 864 aa6.77□□□□□ -1.33
EPB41L3-221ENST00000580866 MAP3K9P80192 1104 aa6.77□□□□□ -1.33
EPB41L3-221ENST00000580866 TXNDC2Q86VQ3 553 aa6.77□□□□□ -1.33
EPB41L3-221ENST00000580866 KHSRPQ92945 711 aaKnown RBP eCLIP6.77□□□□□ -1.33
EPB41L3-221ENST00000580866 MSH6P52701 1360 aa6.77□□□□□ -1.33
EPB41L3-221ENST00000580866 NWD1Q149M9 1564 aa6.77□□□□□ -1.33
EPB41L3-221ENST00000580866 MAP3K1Q13233 1512 aa6.76□□□□□ -1.33
EPB41L3-221ENST00000580866 KIF14Q15058 1648 aa6.76□□□□□ -1.33
EPB41L3-221ENST00000580866 NHSL1Q5SYE7 1610 aa6.76□□□□□ -1.33
EPB41L3-221ENST00000580866 SLC34A2O95436 690 aa6.76□□□□□ -1.33
EPB41L3-221ENST00000580866 EMILIN3Q9NT22 766 aa6.76□□□□□ -1.33
EPB41L3-221ENST00000580866 PCDHGA4Q9Y5G9 962 aa6.76□□□□□ -1.33
EPB41L3-221ENST00000580866 SCAF11Q99590 1463 aaKnown RBP6.76□□□□□ -1.33
EPB41L3-221ENST00000580866 TROQ12816 1431 aaPredicted RBP6.76□□□□□ -1.33
EPB41L3-221ENST00000580866 PTCD2Q8WV60 388 aaKnown RBP6.75□□□□□ -1.33
EPB41L3-221ENST00000580866 PRDM15P57071 1507 aaPredicted RBP6.75□□□□□ -1.33
EPB41L3-221ENST00000580866 WASHC2CQ9Y4E1 1318 aa6.75□□□□□ -1.33
EPB41L3-221ENST00000580866 DPYSL4O14531 572 aa6.74□□□□□ -1.33
EPB41L3-221ENST00000580866 NUDT7P0C024 238 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms