RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 UNC13BO14795 1591 aa12.28□□□□□ -0.44
SMARCE1-217ENST00000580654 SPDYE2BA6NHP3 402 aa12.28□□□□□ -0.44
SMARCE1-217ENST00000580654 C19orf67A6NJJ6 358 aa12.28□□□□□ -0.44
SMARCE1-217ENST00000580654 SPDYE6P0CI01 402 aa12.28□□□□□ -0.44
SMARCE1-217ENST00000580654 SPDYE2Q495Y8 402 aa12.28□□□□□ -0.44
SMARCE1-217ENST00000580654 LHX8Q68G74 356 aa12.28□□□□□ -0.44
SMARCE1-217ENST00000580654 AMOTL2Q9Y2J4 779 aa12.28□□□□□ -0.44
SMARCE1-217ENST00000580654 LAMC1P11047 1609 aa12.28□□□□□ -0.44
SMARCE1-217ENST00000580654 RPRD2Q5VT52 1461 aaKnown RBP12.27□□□□□ -0.44
SMARCE1-217ENST00000580654 NRXN3Q9Y4C0 1643 aa12.27□□□□□ -0.44
SMARCE1-217ENST00000580654 KANK4Q5T7N3 995 aaPredicted RBP12.27□□□□□ -0.45
SMARCE1-217ENST00000580654 USP21Q9UK80 565 aa12.27□□□□□ -0.45
SMARCE1-217ENST00000580654 DAPK1P53355 1430 aa12.27□□□□□ -0.45
SMARCE1-217ENST00000580654 PTPN23Q9H3S7 1636 aa12.26□□□□□ -0.45
SMARCE1-217ENST00000580654 NALCNQ8IZF0 1738 aa12.26□□□□□ -0.45
SMARCE1-217ENST00000580654 HDGFP51858 240 aaKnown RBP12.26□□□□□ -0.45
SMARCE1-217ENST00000580654 CCDC125Q86Z20 511 aa12.26□□□□□ -0.45
SMARCE1-217ENST00000580654 FNBP4Q8N3X1 1017 aaPredicted RBP12.26□□□□□ -0.45
SMARCE1-217ENST00000580654 TRPC5Q9UL62 973 aaPredicted RBP12.26□□□□□ -0.45
SMARCE1-217ENST00000580654 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.24□□□□□ -0.45
SMARCE1-217ENST00000580654 COL22A1Q8NFW1 1626 aaPredicted RBP12.24□□□□□ -0.45
SMARCE1-217ENST00000580654 MARF1Q9Y4F3 1742 aaKnown RBP12.23□□□□□ -0.45
SMARCE1-217ENST00000580654 BCL9LQ86UU0 1499 aa12.23□□□□□ -0.45
SMARCE1-217ENST00000580654 PTCH1Q13635 1447 aa12.23□□□□□ -0.45
SMARCE1-217ENST00000580654 GABBR2O75899 941 aa12.23□□□□□ -0.45
SMARCE1-217ENST00000580654 BRWD3Q6RI45 1802 aa12.23□□□□□ -0.45
SMARCE1-217ENST00000580654 DEFB132Q7Z7B7 95 aa12.22□□□□□ -0.45
SMARCE1-217ENST00000580654 E9PCH4 1651 aa12.22□□□□□ -0.45
SMARCE1-217ENST00000580654 BLMP54132 1417 aaPredicted RBP12.21□□□□□ -0.45
SMARCE1-217ENST00000580654 ADGRL3Q9HAR2 1447 aa12.21□□□□□ -0.45
SMARCE1-217ENST00000580654 ANKRD30AQ9BXX3 1397 aa12.21□□□□□ -0.45
SMARCE1-217ENST00000580654 CHGAP10645 457 aaKnown RBP12.21□□□□□ -0.45
SMARCE1-217ENST00000580654 SPDYE1Q8NFV5 336 aaPredicted RBP12.21□□□□□ -0.45
SMARCE1-217ENST00000580654 CHIC2Q9UKJ5 165 aa12.21□□□□□ -0.45
SMARCE1-217ENST00000580654 C1orf167Q5SNV9 1468 aa12.21□□□□□ -0.46
SMARCE1-217ENST00000580654 SOS2Q07890 1332 aaPredicted RBP12.2□□□□□ -0.46
SMARCE1-217ENST00000580654 GLI3P10071 1580 aa12.2□□□□□ -0.46
SMARCE1-217ENST00000580654 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.19□□□□□ -0.46
SMARCE1-217ENST00000580654 MYOM2P54296 1465 aa12.19□□□□□ -0.46
SMARCE1-217ENST00000580654 VPS8Q8N3P4 1428 aa12.19□□□□□ -0.46
SMARCE1-217ENST00000580654 METP08581 1390 aa12.18□□□□□ -0.46
SMARCE1-217ENST00000580654 ADGRL2O95490 1459 aa12.18□□□□□ -0.46
SMARCE1-217ENST00000580654 SPHKAPQ2M3C7 1700 aa12.17□□□□□ -0.46
SMARCE1-217ENST00000580654 GJD4Q96KN9 370 aaPredicted RBP12.17□□□□□ -0.46
SMARCE1-217ENST00000580654 SLC4A1APQ9BWU0 796 aaKnown RBP12.17□□□□□ -0.46
SMARCE1-217ENST00000580654 CLEC11AQ9Y240 323 aa12.17□□□□□ -0.46
SMARCE1-217ENST00000580654 ORAI2Q96SN7 254 aa12.16□□□□□ -0.46
SMARCE1-217ENST00000580654 IQGAP3Q86VI3 1631 aa12.15□□□□□ -0.46
SMARCE1-217ENST00000580654 RALGAPBQ86X10 1494 aa12.14□□□□□ -0.47
SMARCE1-217ENST00000580654 ANKRD50Q9ULJ7 1429 aa12.14□□□□□ -0.47
SMARCE1-217ENST00000580654 PSDA5PKW4 1024 aaPredicted RBP12.14□□□□□ -0.47
SMARCE1-217ENST00000580654 HRCP23327 699 aa12.14□□□□□ -0.47
SMARCE1-217ENST00000580654 PXDNQ92626 1479 aa12.12□□□□□ -0.47
SMARCE1-217ENST00000580654 SLIT2O94813 1529 aa12.11□□□□□ -0.47
SMARCE1-217ENST00000580654 SF3B2Q13435 895 aaKnown RBP12.08□□□□□ -0.48
SMARCE1-217ENST00000580654 IFFO2Q5TF58 517 aa12.08□□□□□ -0.48
SMARCE1-217ENST00000580654 UNC5CLQ8IV45 518 aa12.08□□□□□ -0.48
SMARCE1-217ENST00000580654 ROBO2Q9HCK4 1378 aa12.07□□□□□ -0.48
SMARCE1-217ENST00000580654 NEXMIFQ5QGS0 1516 aa12.07□□□□□ -0.48
SMARCE1-217ENST00000580654 ATXN8OSP0DMR3 200 aa12.07□□□□□ -0.48
SMARCE1-217ENST00000580654 SEPT12Q8IYM1 358 aa12.07□□□□□ -0.48
SMARCE1-217ENST00000580654 YY1P25490 414 aa12.06□□□□□ -0.48
SMARCE1-217ENST00000580654 USP32Q8NFA0 1604 aa12.06□□□□□ -0.48
SMARCE1-217ENST00000580654 XPCQ01831 940 aaPredicted RBP12.05□□□□□ -0.48
SMARCE1-217ENST00000580654 PLCH1Q4KWH8 1693 aa12.05□□□□□ -0.48
SMARCE1-217ENST00000580654 PRAG1Q86YV5 1406 aa12.04□□□□□ -0.48
SMARCE1-217ENST00000580654 ONECUT3O60422 494 aaPredicted RBP12.04□□□□□ -0.48
SMARCE1-217ENST00000580654 SSUH2Q9Y2M2 353 aa12.04□□□□□ -0.48
SMARCE1-217ENST00000580654 NPHP3Q7Z494 1330 aa12.04□□□□□ -0.48
SMARCE1-217ENST00000580654 RGPD1P0DJD0 1748 aa12.03□□□□□ -0.48
SMARCE1-217ENST00000580654 NWD2Q9ULI1 1742 aa12.03□□□□□ -0.48
SMARCE1-217ENST00000580654 BAG6P46379 1132 aa12.03□□□□□ -0.48
SMARCE1-217ENST00000580654 KRT27Q7Z3Y8 459 aa12.03□□□□□ -0.48
SMARCE1-217ENST00000580654 CDC42BPGQ6DT37 1551 aa12.03□□□□□ -0.48
SMARCE1-217ENST00000580654 TNS1Q9HBL0 1735 aaKnown RBP12.03□□□□□ -0.48
SMARCE1-217ENST00000580654 R3HDM1Q15032 1099 aaKnown RBP12.02□□□□□ -0.49
SMARCE1-217ENST00000580654 CLTCL1P53675 1640 aa12.01□□□□□ -0.49
SMARCE1-217ENST00000580654 FOXO3O43524 673 aa12.01□□□□□ -0.49
SMARCE1-217ENST00000580654 EN1Q05925 392 aaPredicted RBP12.01□□□□□ -0.49
SMARCE1-217ENST00000580654 VPS72Q15906 364 aa12.01□□□□□ -0.49
SMARCE1-217ENST00000580654 ZNF326Q5BKZ1 582 aaKnown RBP12.01□□□□□ -0.49
SMARCE1-217ENST00000580654 ESCO1Q5FWF5 840 aa12.01□□□□□ -0.49
SMARCE1-217ENST00000580654 ABCA3Q99758 1704 aa12□□□□□ -0.49
SMARCE1-217ENST00000580654 ZNF692Q9BU19 519 aaPredicted RBP12□□□□□ -0.49
SMARCE1-217ENST00000580654 NRAPQ86VF7 1730 aa12□□□□□ -0.49
SMARCE1-217ENST00000580654 CHADLQ6NUI6 762 aa11.99□□□□□ -0.49
SMARCE1-217ENST00000580654 PLSCR2Q9NRY7 297 aa11.99□□□□□ -0.49
SMARCE1-217ENST00000580654 HFM1A2PYH4 1435 aa11.99□□□□□ -0.49
SMARCE1-217ENST00000580654 DISP2A7MBM2 1401 aa11.98□□□□□ -0.49
SMARCE1-217ENST00000580654 NUP155O75694 1391 aa11.98□□□□□ -0.49
SMARCE1-217ENST00000580654 SPATA31A3Q5VYP0 1347 aa11.98□□□□□ -0.49
SMARCE1-217ENST00000580654 KIF1BO60333 1816 aa11.97□□□□□ -0.49
SMARCE1-217ENST00000580654 FAM50AQ14320 339 aaKnown RBP11.97□□□□□ -0.49
SMARCE1-217ENST00000580654 POTEIP0CG38 1075 aa11.96□□□□□ -0.49
SMARCE1-217ENST00000580654 LRPPRCP42704 1394 aaKnown RBP11.95□□□□□ -0.5
SMARCE1-217ENST00000580654 FMN2Q9NZ56 1722 aa11.95□□□□□ -0.5
SMARCE1-217ENST00000580654 KIF1AQ12756 1690 aa11.95□□□□□ -0.5
SMARCE1-217ENST00000580654 CAMTA1Q9Y6Y1 1673 aa11.95□□□□□ -0.5
SMARCE1-217ENST00000580654 EZH2Q15910 746 aaKnown RBP11.95□□□□□ -0.5
SMARCE1-217ENST00000580654 FAM182BQ5T319 152 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms