RNA–Protein interactions for RNA: ENST00000580565.1

CSNK1D-214, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-214ENST00000580565 PIK3C2GO75747 1445 aa25.9■■□□□ 1.74
CSNK1D-214ENST00000580565 RAB3GAP2Q9H2M9 1393 aa25.9■■□□□ 1.74
CSNK1D-214ENST00000580565 AFF2P51816 1311 aa25.88■■□□□ 1.73
CSNK1D-214ENST00000580565 RXRBP28702 533 aa25.88■■□□□ 1.73
CSNK1D-214ENST00000580565 ESCO1Q5FWF5 840 aa25.87■■□□□ 1.73
CSNK1D-214ENST00000580565 C8orf37Q96NL8 207 aa25.86■■□□□ 1.73
CSNK1D-214ENST00000580565 C14orf93Q9H972 538 aaKnown RBP25.86■■□□□ 1.73
CSNK1D-214ENST00000580565 LAMC1P11047 1609 aa25.85■■□□□ 1.73
CSNK1D-214ENST00000580565 PLEKHH1Q9ULM0 1364 aa25.84■■□□□ 1.73
CSNK1D-214ENST00000580565 CDC42BPGQ6DT37 1551 aa25.84■■□□□ 1.73
CSNK1D-214ENST00000580565 IFT172Q9UG01 1749 aa25.84■■□□□ 1.73
CSNK1D-214ENST00000580565 YTHDC2Q9H6S0 1430 aaKnown RBP25.83■■□□□ 1.73
CSNK1D-214ENST00000580565 ADAMTS2O95450 1211 aa25.83■■□□□ 1.73
CSNK1D-214ENST00000580565 SIRT1Q96EB6 747 aa25.82■■□□□ 1.72
CSNK1D-214ENST00000580565 NPHP3Q7Z494 1330 aa25.82■■□□□ 1.72
CSNK1D-214ENST00000580565 NUTM2FA1L443 756 aa25.81■■□□□ 1.72
CSNK1D-214ENST00000580565 CFAP70Q5T0N1 1121 aa25.81■■□□□ 1.72
CSNK1D-214ENST00000580565 FOXO3O43524 673 aa25.8■■□□□ 1.72
CSNK1D-214ENST00000580565 NGLY1Q96IV0 654 aa25.8■■□□□ 1.72
CSNK1D-214ENST00000580565 NRXN1Q9ULB1 1477 aa25.79■■□□□ 1.72
CSNK1D-214ENST00000580565 QTRT2Q9H974 415 aaKnown RBP25.79■■□□□ 1.72
CSNK1D-214ENST00000580565 DHX57Q6P158 1386 aaKnown RBP25.78■■□□□ 1.72
CSNK1D-214ENST00000580565 MYOM2P54296 1465 aa25.78■■□□□ 1.72
CSNK1D-214ENST00000580565 XPCQ01831 940 aaPredicted RBP25.76■■□□□ 1.71
CSNK1D-214ENST00000580565 CDK12Q9NYV4 1490 aaPredicted RBP25.75■■□□□ 1.71
CSNK1D-214ENST00000580565 PXDNQ92626 1479 aa25.74■■□□□ 1.71
CSNK1D-214ENST00000580565 HRCP23327 699 aa25.74■■□□□ 1.71
CSNK1D-214ENST00000580565 RBM6P78332 1123 aaKnown RBP25.74■■□□□ 1.71
CSNK1D-214ENST00000580565 KNDC1Q76NI1 1749 aa25.74■■□□□ 1.71
CSNK1D-214ENST00000580565 UPF1Q92900 1129 aaKnown RBP eCLIP25.73■■□□□ 1.713e-9■□□□□ 9.3
CSNK1D-214ENST00000580565 PRAM1Q96QH2 718 aa25.71■■□□□ 1.71
CSNK1D-214ENST00000580565 FNBP4Q8N3X1 1017 aaPredicted RBP25.7■■□□□ 1.7
CSNK1D-214ENST00000580565 USP21Q9UK80 565 aa25.7■■□□□ 1.7
CSNK1D-214ENST00000580565 SAFB2Q14151 953 aaKnown RBP eCLIP25.68■■□□□ 1.7
CSNK1D-214ENST00000580565 COL22A1Q8NFW1 1626 aaPredicted RBP25.67■■□□□ 1.7
CSNK1D-214ENST00000580565 DCAF11Q8TEB1 546 aa25.67■■□□□ 1.7
CSNK1D-214ENST00000580565 POGKQ9P215 609 aa25.67■■□□□ 1.7
CSNK1D-214ENST00000580565 KDM2AQ9Y2K7 1162 aa25.67■■□□□ 1.7
CSNK1D-214ENST00000580565 KRT28Q7Z3Y7 464 aa25.66■■□□□ 1.7
CSNK1D-214ENST00000580565 TRPC5Q9UL62 973 aaPredicted RBP25.65■■□□□ 1.7
CSNK1D-214ENST00000580565 PHF8Q9UPP1 1060 aa25.65■■□□□ 1.7
CSNK1D-214ENST00000580565 FMN2Q9NZ56 1722 aa25.65■■□□□ 1.7
CSNK1D-214ENST00000580565 SPATA31A3Q5VYP0 1347 aa25.64■■□□□ 1.7
CSNK1D-214ENST00000580565 RGS12O14924 1447 aa25.64■■□□□ 1.7
CSNK1D-214ENST00000580565 STAC3Q96MF2 364 aa25.64■■□□□ 1.7
CSNK1D-214ENST00000580565 TRAK1Q9UPV9 953 aa25.62■■□□□ 1.69
CSNK1D-214ENST00000580565 DLC1Q96QB1 1528 aa25.62■■□□□ 1.69
CSNK1D-214ENST00000580565 ADGRB1O14514 1584 aa25.61■■□□□ 1.69
CSNK1D-214ENST00000580565 PSME1Q06323 249 aa25.6■■□□□ 1.69
CSNK1D-214ENST00000580565 KIF1AQ12756 1690 aa25.58■■□□□ 1.69
CSNK1D-214ENST00000580565 ATRNO75882 1429 aa25.58■■□□□ 1.69
CSNK1D-214ENST00000580565 BCL9LQ86UU0 1499 aa25.57■■□□□ 1.68
CSNK1D-214ENST00000580565 HIRIP3Q9BW71 556 aaPredicted RBP25.56■■□□□ 1.68
CSNK1D-214ENST00000580565 ANKARQ7Z5J8 1434 aa25.54■■□□□ 1.68
CSNK1D-214ENST00000580565 PMFBP1Q8TBY8 1022 aa25.54■■□□□ 1.68
CSNK1D-214ENST00000580565 MINK1Q8N4C8 1332 aaPredicted RBP25.54■■□□□ 1.68
CSNK1D-214ENST00000580565 TNS3Q68CZ2 1445 aa25.54■■□□□ 1.68
CSNK1D-214ENST00000580565 SBNO1A3KN83 1393 aa25.53■■□□□ 1.68
CSNK1D-214ENST00000580565 HAP1P54257 671 aaPredicted RBP25.51■■□□□ 1.67
CSNK1D-214ENST00000580565 LMOD2Q6P5Q4 547 aa25.51■■□□□ 1.67
CSNK1D-214ENST00000580565 CABLES1Q8TDN4 633 aa25.51■■□□□ 1.67
CSNK1D-214ENST00000580565 GJD4Q96KN9 370 aaPredicted RBP25.51■■□□□ 1.67
CSNK1D-214ENST00000580565 WASLO00401 505 aaPredicted RBP25.5■■□□□ 1.67
CSNK1D-214ENST00000580565 ADGRB2O60241 1585 aa25.5■■□□□ 1.67
CSNK1D-214ENST00000580565 UNC5CLQ8IV45 518 aa25.5■■□□□ 1.67
CSNK1D-214ENST00000580565 ATAD2Q6PL18 1390 aa25.49■■□□□ 1.67
CSNK1D-214ENST00000580565 ARHGEF10O15013 1369 aa25.48■■□□□ 1.67
CSNK1D-214ENST00000580565 EIF3AQ14152 1382 aaKnown RBP25.48■■□□□ 1.67
CSNK1D-214ENST00000580565 PRR36Q9H6K5 1346 aa25.48■■□□□ 1.67
CSNK1D-214ENST00000580565 PLEKHG5O94827 1062 aa25.48■■□□□ 1.67
CSNK1D-214ENST00000580565 SLIT2O94813 1529 aa25.47■■□□□ 1.67
CSNK1D-214ENST00000580565 RGPD8O14715 1765 aaPredicted RBP25.46■■□□□ 1.67
CSNK1D-214ENST00000580565 USP32Q8NFA0 1604 aa25.46■■□□□ 1.67
CSNK1D-214ENST00000580565 GPRASP1Q5JY77 1395 aa25.44■■□□□ 1.66
CSNK1D-214ENST00000580565 MARF1Q9Y4F3 1742 aaKnown RBP25.44■■□□□ 1.66
CSNK1D-214ENST00000580565 TULP4Q9NRJ4 1543 aa25.42■■□□□ 1.66
CSNK1D-214ENST00000580565 NGDNQ8NEJ9 315 aaKnown RBP25.41■■□□□ 1.66
CSNK1D-214ENST00000580565 RALGAPBQ86X10 1494 aa25.4■■□□□ 1.66
CSNK1D-214ENST00000580565 FAM83GA6ND36 823 aa25.39■■□□□ 1.66
CSNK1D-214ENST00000580565 VPS72Q15906 364 aa25.38■■□□□ 1.65
CSNK1D-214ENST00000580565 NUDT16Q96DE0 195 aaKnown RBP25.38■■□□□ 1.65
CSNK1D-214ENST00000580565 NBPF1Q3BBV0 1214 aa25.36■■□□□ 1.65
CSNK1D-214ENST00000580565 CDK19Q9BWU1 502 aa25.36■■□□□ 1.65
CSNK1D-214ENST00000580565 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.36■■□□□ 1.65
CSNK1D-214ENST00000580565 PAK3O75914 559 aaPredicted RBP25.34■■□□□ 1.65
CSNK1D-214ENST00000580565 CCDC125Q86Z20 511 aa25.34■■□□□ 1.65
CSNK1D-214ENST00000580565 CCDC9Q9Y3X0 531 aaKnown RBP25.34■■□□□ 1.65
CSNK1D-214ENST00000580565 GLI3P10071 1580 aa25.34■■□□□ 1.65
CSNK1D-214ENST00000580565 ARHGEF28Q8N1W1 1705 aaKnown RBP25.32■■□□□ 1.64
CSNK1D-214ENST00000580565 ATP7BP35670 1465 aa25.32■■□□□ 1.64
CSNK1D-214ENST00000580565 TRPM3Q9HCF6 1732 aaPredicted RBP25.32■■□□□ 1.64
CSNK1D-214ENST00000580565 ONECUT3O60422 494 aaPredicted RBP25.31■■□□□ 1.64
CSNK1D-214ENST00000580565 SEPT12Q8IYM1 358 aa25.31■■□□□ 1.64
CSNK1D-214ENST00000580565 BTG4Q9NY30 223 aa25.3■■□□□ 1.64
CSNK1D-214ENST00000580565 CCDC61Q9Y6R9 512 aa25.29■■□□□ 1.64
CSNK1D-214ENST00000580565 EP400Q96L91 3159 aa25.28■■□□□ 1.64
CSNK1D-214ENST00000580565 ABCA3Q99758 1704 aa25.28■■□□□ 1.64
CSNK1D-214ENST00000580565 ALS2Q96Q42 1657 aa25.27■■□□□ 1.64
CSNK1D-214ENST00000580565 KIAA1210Q9ULL0 1709 aa25.27■■□□□ 1.64
CSNK1D-214ENST00000580565 PLEKHG3A1L390 1219 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms