RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 PTPN23Q9H3S7 1636 aa22.25■■□□□ 1.15
CSNK1D-213ENST00000580446 PLEKHG5O94827 1062 aa22.25■■□□□ 1.15
CSNK1D-213ENST00000580446 IFFO2Q5TF58 517 aa22.25■■□□□ 1.15
CSNK1D-213ENST00000580446 KRT27Q7Z3Y8 459 aa22.24■■□□□ 1.15
CSNK1D-213ENST00000580446 A0A0G2JS52 829 aa22.22■■□□□ 1.15
CSNK1D-213ENST00000580446 MYT1Q01538 1121 aa22.22■■□□□ 1.15
CSNK1D-213ENST00000580446 CCDC9Q9Y3X0 531 aaKnown RBP22.22■■□□□ 1.15
CSNK1D-213ENST00000580446 FAM182BQ5T319 152 aa22.21■■□□□ 1.15
CSNK1D-213ENST00000580446 SLIT2O94813 1529 aa22.21■■□□□ 1.15
CSNK1D-213ENST00000580446 PXDNQ92626 1479 aa22.19■■□□□ 1.14
CSNK1D-213ENST00000580446 MARF1Q9Y4F3 1742 aaKnown RBP22.18■■□□□ 1.14
CSNK1D-213ENST00000580446 SENP3-EIF4A1A0A087X0R7 540 aa22.18■■□□□ 1.14
CSNK1D-213ENST00000580446 FOXO3O43524 673 aa22.18■■□□□ 1.14
CSNK1D-213ENST00000580446 ESCO1Q5FWF5 840 aa22.18■■□□□ 1.14
CSNK1D-213ENST00000580446 ROBO2Q9HCK4 1378 aa22.17■■□□□ 1.14
CSNK1D-213ENST00000580446 ZNF326Q5BKZ1 582 aaKnown RBP22.17■■□□□ 1.14
CSNK1D-213ENST00000580446 SPHKAPQ2M3C7 1700 aa22.17■■□□□ 1.14
CSNK1D-213ENST00000580446 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.17■■□□□ 1.14
CSNK1D-213ENST00000580446 ANKRD50Q9ULJ7 1429 aa22.16■■□□□ 1.14
CSNK1D-213ENST00000580446 E9PCH4 1651 aa22.15■■□□□ 1.14
CSNK1D-213ENST00000580446 NPHP3Q7Z494 1330 aa22.14■■□□□ 1.14
CSNK1D-213ENST00000580446 NUTM2FA1L443 756 aa22.14■■□□□ 1.13
CSNK1D-213ENST00000580446 EZH2Q15910 746 aaKnown RBP22.13■■□□□ 1.13
CSNK1D-213ENST00000580446 VPS72Q15906 364 aa22.12■■□□□ 1.13
CSNK1D-213ENST00000580446 CABLES1Q8TDN4 633 aa22.11■■□□□ 1.13
CSNK1D-213ENST00000580446 VPS8Q8N3P4 1428 aa22.1■■□□□ 1.13
CSNK1D-213ENST00000580446 FAM98CQ17RN3 349 aaKnown RBP22.09■■□□□ 1.13
CSNK1D-213ENST00000580446 ONECUT3O60422 494 aaPredicted RBP22.08■■□□□ 1.13
CSNK1D-213ENST00000580446 ADGRL2O95490 1459 aa22.07■■□□□ 1.12
CSNK1D-213ENST00000580446 HAP1P54257 671 aaPredicted RBP22.06■■□□□ 1.12
CSNK1D-213ENST00000580446 USP32Q8NFA0 1604 aa22.06■■□□□ 1.12
CSNK1D-213ENST00000580446 ZNF784Q8NCA9 323 aaPredicted RBP22.05■■□□□ 1.12
CSNK1D-213ENST00000580446 PPP1R1BQ9UD71 204 aaPredicted RBP22.04■■□□□ 1.12
CSNK1D-213ENST00000580446 SPATA31A3Q5VYP0 1347 aa22.02■■□□□ 1.12
CSNK1D-213ENST00000580446 IQGAP3Q86VI3 1631 aa22.01■■□□□ 1.11
CSNK1D-213ENST00000580446 CAMTA1Q9Y6Y1 1673 aa22.01■■□□□ 1.11
CSNK1D-213ENST00000580446 FAM50AQ14320 339 aaKnown RBP22■■□□□ 1.11
CSNK1D-213ENST00000580446 PLCH1Q4KWH8 1693 aa22■■□□□ 1.11
CSNK1D-213ENST00000580446 DCAF8L1A6NGE4 600 aa21.99■■□□□ 1.11
CSNK1D-213ENST00000580446 CAMKK2Q96RR4 588 aa21.99■■□□□ 1.11
CSNK1D-213ENST00000580446 NEXMIFQ5QGS0 1516 aa21.98■■□□□ 1.11
CSNK1D-213ENST00000580446 RGPD1P0DJD0 1748 aa21.97■■□□□ 1.11
CSNK1D-213ENST00000580446 TRIM37O94972 964 aa21.97■■□□□ 1.11
CSNK1D-213ENST00000580446 TNS1Q9HBL0 1735 aaKnown RBP21.96■■□□□ 1.11
CSNK1D-213ENST00000580446 DISP2A7MBM2 1401 aa21.96■■□□□ 1.11
CSNK1D-213ENST00000580446 FAM83GA6ND36 823 aa21.95■■□□□ 1.1
CSNK1D-213ENST00000580446 C1QTNF8P60827 252 aa21.94■■□□□ 1.1
CSNK1D-213ENST00000580446 LMOD2Q6P5Q4 547 aa21.94■■□□□ 1.1
CSNK1D-213ENST00000580446 KRT28Q7Z3Y7 464 aa21.94■■□□□ 1.1
CSNK1D-213ENST00000580446 NUP155O75694 1391 aa21.94■■□□□ 1.1
CSNK1D-213ENST00000580446 LRPPRCP42704 1394 aaKnown RBP21.94■■□□□ 1.1
CSNK1D-213ENST00000580446 CDC42BPGQ6DT37 1551 aa21.93■■□□□ 1.1
CSNK1D-213ENST00000580446 HFM1A2PYH4 1435 aa21.92■■□□□ 1.1
CSNK1D-213ENST00000580446 NAIPQ13075 1403 aa21.92■■□□□ 1.1
CSNK1D-213ENST00000580446 APBA3O96018 575 aa21.92■■□□□ 1.1
CSNK1D-213ENST00000580446 SPON1Q9HCB6 807 aa21.9■■□□□ 1.1
CSNK1D-213ENST00000580446 BTG4Q9NY30 223 aa21.9■■□□□ 1.1
CSNK1D-213ENST00000580446 NINLQ9Y2I6 1382 aa21.89■■□□□ 1.1
CSNK1D-213ENST00000580446 WAPLQ7Z5K2 1190 aa21.89■■□□□ 1.09
CSNK1D-213ENST00000580446 TNS3Q68CZ2 1445 aa21.89■■□□□ 1.09
CSNK1D-213ENST00000580446 KCNQ2O43526 872 aa21.88■■□□□ 1.09
CSNK1D-213ENST00000580446 NWD2Q9ULI1 1742 aa21.87■■□□□ 1.09
CSNK1D-213ENST00000580446 CCDC144AA2RUR9 1427 aa21.87■■□□□ 1.09
CSNK1D-213ENST00000580446 STK26Q9P289 416 aa21.86■■□□□ 1.09
CSNK1D-213ENST00000580446 CLTCL1P53675 1640 aa21.85■■□□□ 1.09
CSNK1D-213ENST00000580446 ADGRB2O60241 1585 aa21.85■■□□□ 1.09
CSNK1D-213ENST00000580446 NRAPQ86VF7 1730 aa21.84■■□□□ 1.09
CSNK1D-213ENST00000580446 PLEKHH1Q9ULM0 1364 aa21.84■■□□□ 1.09
CSNK1D-213ENST00000580446 PRAG1Q86YV5 1406 aa21.83■■□□□ 1.09
CSNK1D-213ENST00000580446 ABCA3Q99758 1704 aa21.82■■□□□ 1.08
CSNK1D-213ENST00000580446 SPATA31A5Q5VU36 1347 aa21.81■■□□□ 1.08
CSNK1D-213ENST00000580446 SPATA31A7Q8IWB4 1347 aa21.81■■□□□ 1.08
CSNK1D-213ENST00000580446 NUP188Q5SRE5 1749 aa21.81■■□□□ 1.08
CSNK1D-213ENST00000580446 NBPF8Q3BBV2 869 aa21.81■■□□□ 1.08
CSNK1D-213ENST00000580446 NBPF14Q5TI25 921 aa21.81■■□□□ 1.08
CSNK1D-213ENST00000580446 THSD7AQ9UPZ6 1657 aa21.79■■□□□ 1.08
CSNK1D-213ENST00000580446 APLP2Q06481 763 aa21.79■■□□□ 1.08
CSNK1D-213ENST00000580446 LOC105371045A0A1W2PR82 267 aa21.78■■□□□ 1.08
CSNK1D-213ENST00000580446 PDGFDQ9GZP0 370 aaPredicted RBP21.78■■□□□ 1.08
CSNK1D-213ENST00000580446 RREB1Q92766 1687 aa21.78■■□□□ 1.08
CSNK1D-213ENST00000580446 PARD3Q8TEW0 1356 aa21.77■■□□□ 1.08
CSNK1D-213ENST00000580446 FAM196AQ6ZSG2 479 aa21.77■■□□□ 1.08
CSNK1D-213ENST00000580446 NRKQ7Z2Y5 1582 aa21.77■■□□□ 1.08
CSNK1D-213ENST00000580446 CEP350Q5VT06 3117 aa21.76■■□□□ 1.07
CSNK1D-213ENST00000580446 VGFO15240 615 aaPredicted RBP21.76■■□□□ 1.07
CSNK1D-213ENST00000580446 PHF8Q9UPP1 1060 aa21.76■■□□□ 1.07
CSNK1D-213ENST00000580446 KIF1AQ12756 1690 aa21.75■■□□□ 1.07
CSNK1D-213ENST00000580446 UTRNP46939 3433 aa21.74■■□□□ 1.07
CSNK1D-213ENST00000580446 ZBTB7AO95365 584 aa21.74■■□□□ 1.07
CSNK1D-213ENST00000580446 PSME1Q06323 249 aa21.74■■□□□ 1.07
CSNK1D-213ENST00000580446 FMN2Q9NZ56 1722 aa21.72■■□□□ 1.07
CSNK1D-213ENST00000580446 ITGAEP38570 1179 aa21.72■■□□□ 1.07
CSNK1D-213ENST00000580446 ARHGEF10O15013 1369 aa21.72■■□□□ 1.07
CSNK1D-213ENST00000580446 ANO8Q9HCE9 1232 aaPredicted RBP21.71■■□□□ 1.07
CSNK1D-213ENST00000580446 USP35Q9P2H5 1018 aa21.71■■□□□ 1.07
CSNK1D-213ENST00000580446 SBNO1A3KN83 1393 aa21.71■■□□□ 1.07
CSNK1D-213ENST00000580446 TMEM132EQ6IEE7 984 aa21.7■■□□□ 1.06
CSNK1D-213ENST00000580446 PMFBP1Q8TBY8 1022 aa21.7■■□□□ 1.06
CSNK1D-213ENST00000580446 STRN4Q9NRL3 753 aa21.69■■□□□ 1.06
CSNK1D-213ENST00000580446 ATF5Q9Y2D1 282 aaPredicted RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms