RNA–Protein interactions for RNA: ENST00000580231.5

SENP3-203, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-203ENST00000580231 SPAG9O60271 1321 aaKnown RBP12.74□□□□□ -0.37
SENP3-203ENST00000580231 ANKRD13DQ6ZTN6 518 aa12.74□□□□□ -0.37
SENP3-203ENST00000580231 PLPP6Q8IY26 295 aa12.74□□□□□ -0.37
SENP3-203ENST00000580231 PTCD2Q8WV60 388 aaKnown RBP12.74□□□□□ -0.37
SENP3-203ENST00000580231 TRAPPC8Q9Y2L5 1435 aa12.73□□□□□ -0.37
SENP3-203ENST00000580231 LSM11P83369 360 aaKnown RBP eCLIP12.73□□□□□ -0.379e-7■■□□□ 13.5
SENP3-203ENST00000580231 FAM135AQ9P2D6 1515 aa12.72□□□□□ -0.37
SENP3-203ENST00000580231 FANCAO15360 1455 aa12.72□□□□□ -0.37
SENP3-203ENST00000580231 KDM4FA0A1W2PPD8 638 aa12.72□□□□□ -0.37
SENP3-203ENST00000580231 PTGER2P43116 358 aa12.72□□□□□ -0.37
SENP3-203ENST00000580231 POTEEQ6S8J3 1075 aa12.72□□□□□ -0.37
SENP3-203ENST00000580231 PBX2P40425 430 aa12.71□□□□□ -0.37
SENP3-203ENST00000580231 DDX10Q13206 875 aaKnown RBP12.71□□□□□ -0.37
SENP3-203ENST00000580231 DSG2Q14126 1118 aa12.71□□□□□ -0.37
SENP3-203ENST00000580231 RYDENQ9NUL5 291 aaKnown RBP12.71□□□□□ -0.37
SENP3-203ENST00000580231 MAGI2Q86UL8 1455 aa12.71□□□□□ -0.38
SENP3-203ENST00000580231 IQGAP3Q86VI3 1631 aa12.7□□□□□ -0.38
SENP3-203ENST00000580231 COL17A1Q9UMD9 1497 aaPredicted RBP12.7□□□□□ -0.38
SENP3-203ENST00000580231 UHRF1BP1Q6BDS2 1440 aa12.7□□□□□ -0.38
SENP3-203ENST00000580231 HSPA5P11021 654 aaKnown RBP12.69□□□□□ -0.38
SENP3-203ENST00000580231 NBPF8Q3BBV2 869 aa12.69□□□□□ -0.38
SENP3-203ENST00000580231 ATP10AO60312 1499 aa12.68□□□□□ -0.38
SENP3-203ENST00000580231 AFAP1Q8N556 730 aa12.68□□□□□ -0.38
SENP3-203ENST00000580231 SCAPERQ9BY12 1400 aa12.68□□□□□ -0.38
SENP3-203ENST00000580231 CFAP74Q9C0B2 1584 aa12.68□□□□□ -0.38
SENP3-203ENST00000580231 ADGRL1O94910 1474 aa12.67□□□□□ -0.38
SENP3-203ENST00000580231 AXIN2Q9Y2T1 843 aa12.67□□□□□ -0.38
SENP3-203ENST00000580231 CD109Q6YHK3 1445 aa12.66□□□□□ -0.38
SENP3-203ENST00000580231 PSDA5PKW4 1024 aaPredicted RBP12.66□□□□□ -0.38
SENP3-203ENST00000580231 CCER2I3L3R5 266 aa12.66□□□□□ -0.38
SENP3-203ENST00000580231 ZFYVE16Q7Z3T8 1539 aa12.66□□□□□ -0.38
SENP3-203ENST00000580231 HIRIP3Q9BW71 556 aaPredicted RBP12.65□□□□□ -0.38
SENP3-203ENST00000580231 ATP7AQ04656 1500 aa12.65□□□□□ -0.38
SENP3-203ENST00000580231 DHX29Q7Z478 1369 aaKnown RBP12.65□□□□□ -0.38
SENP3-203ENST00000580231 INO80Q9ULG1 1556 aaPredicted RBP12.64□□□□□ -0.39
SENP3-203ENST00000580231 CCDC144AA2RUR9 1427 aa12.64□□□□□ -0.39
SENP3-203ENST00000580231 SPATA31E1Q6ZUB1 1445 aa12.64□□□□□ -0.39
SENP3-203ENST00000580231 ANP32CO43423 234 aa12.64□□□□□ -0.39
SENP3-203ENST00000580231 STAC3Q96MF2 364 aa12.63□□□□□ -0.39
SENP3-203ENST00000580231 CRISPLD2Q9H0B8 497 aa12.63□□□□□ -0.39
SENP3-203ENST00000580231 KANK1Q14678 1352 aa12.63□□□□□ -0.39
SENP3-203ENST00000580231 ZNF518AQ6AHZ1 1483 aa12.63□□□□□ -0.39
SENP3-203ENST00000580231 ARID4BQ4LE39 1312 aaPredicted RBP12.62□□□□□ -0.39
SENP3-203ENST00000580231 EIF2AK4Q9P2K8 1649 aaKnown RBP12.62□□□□□ -0.39
SENP3-203ENST00000580231 NEO1Q92859 1461 aa12.62□□□□□ -0.39
SENP3-203ENST00000580231 TBC1D12O60347 775 aa12.62□□□□□ -0.39
SENP3-203ENST00000580231 PLA2R1Q13018 1463 aa12.61□□□□□ -0.39
SENP3-203ENST00000580231 RALGAPBQ86X10 1494 aa12.61□□□□□ -0.39
SENP3-203ENST00000580231 DEPDC5O75140 1603 aa12.61□□□□□ -0.39
SENP3-203ENST00000580231 WASHC2AQ641Q2 1341 aa12.61□□□□□ -0.39
SENP3-203ENST00000580231 ARHGAP33O14559 1287 aa12.6□□□□□ -0.39
SENP3-203ENST00000580231 MLH3Q9UHC1 1453 aa12.59□□□□□ -0.39
SENP3-203ENST00000580231 CCDC7Q96M83 1385 aa12.59□□□□□ -0.39
SENP3-203ENST00000580231 GTPBP6O43824 516 aaPredicted RBP12.59□□□□□ -0.39
SENP3-203ENST00000580231 DCAF11Q8TEB1 546 aa12.59□□□□□ -0.39
SENP3-203ENST00000580231 YTHDC1Q96MU7 727 aaKnown RBP12.59□□□□□ -0.39
SENP3-203ENST00000580231 VWDEQ8N2E2 1590 aa12.59□□□□□ -0.39
SENP3-203ENST00000580231 PTPRTO14522 1441 aa12.58□□□□□ -0.4
SENP3-203ENST00000580231 OXER1Q8TDS5 423 aa12.58□□□□□ -0.4
SENP3-203ENST00000580231 KDM5CP41229 1560 aa12.57□□□□□ -0.4
SENP3-203ENST00000580231 POGZQ7Z3K3 1410 aa12.57□□□□□ -0.4
SENP3-203ENST00000580231 KIDINS220Q9ULH0 1771 aa12.57□□□□□ -0.4
SENP3-203ENST00000580231 KIF3BO15066 747 aa12.57□□□□□ -0.4
SENP3-203ENST00000580231 TET3O43151 1660 aa12.57□□□□□ -0.4
SENP3-203ENST00000580231 NCKAP5LQ9HCH0 1330 aa12.57□□□□□ -0.4
SENP3-203ENST00000580231 POLR1AO95602 1720 aaPredicted RBP12.57□□□□□ -0.4
SENP3-203ENST00000580231 USP47Q96K76 1375 aa12.56□□□□□ -0.4
SENP3-203ENST00000580231 PPP1R15BQ5SWA1 713 aa12.56□□□□□ -0.4
SENP3-203ENST00000580231 A2MP01023 1474 aa12.55□□□□□ -0.4
SENP3-203ENST00000580231 CARD11Q9BXL7 1154 aa12.55□□□□□ -0.4
SENP3-203ENST00000580231 KDM2AQ9Y2K7 1162 aa12.55□□□□□ -0.4
SENP3-203ENST00000580231 PRAG1Q86YV5 1406 aa12.54□□□□□ -0.4
SENP3-203ENST00000580231 CNTLNQ9NXG0 1405 aa12.54□□□□□ -0.4
SENP3-203ENST00000580231 PRDM15P57071 1507 aaPredicted RBP12.54□□□□□ -0.4
SENP3-203ENST00000580231 PDE4AP27815 886 aa12.54□□□□□ -0.4
SENP3-203ENST00000580231 ZNF326Q5BKZ1 582 aaKnown RBP12.54□□□□□ -0.4
SENP3-203ENST00000580231 PPP4R3BQ5MIZ7 849 aa12.54□□□□□ -0.4
SENP3-203ENST00000580231 ADGRD1Q6QNK2 874 aa12.54□□□□□ -0.4
SENP3-203ENST00000580231 UPF1Q92900 1129 aaKnown RBP eCLIP12.54□□□□□ -0.4
SENP3-203ENST00000580231 NEURL4Q96JN8 1562 aa12.54□□□□□ -0.4
SENP3-203ENST00000580231 E9PCH4 1651 aa12.54□□□□□ -0.4
SENP3-203ENST00000580231 TRPM2O94759 1503 aa12.53□□□□□ -0.4
SENP3-203ENST00000580231 LMTK2Q8IWU2 1503 aa12.53□□□□□ -0.4
SENP3-203ENST00000580231 C11orf95C9JLR9 678 aaPredicted RBP12.53□□□□□ -0.4
SENP3-203ENST00000580231 GPRASP1Q5JY77 1395 aa12.53□□□□□ -0.4
SENP3-203ENST00000580231 HECW2Q9P2P5 1572 aa12.52□□□□□ -0.4
SENP3-203ENST00000580231 BCORL1Q5H9F3 1711 aa12.52□□□□□ -0.41
SENP3-203ENST00000580231 PSEN2P49810 448 aa12.52□□□□□ -0.41
SENP3-203ENST00000580231 DMRTA1Q5VZB9 504 aa12.52□□□□□ -0.41
SENP3-203ENST00000580231 KIF7Q2M1P5 1343 aa12.52□□□□□ -0.41
SENP3-203ENST00000580231 ROCK2O75116 1388 aaKnown RBP12.52□□□□□ -0.41
SENP3-203ENST00000580231 RNF17Q9BXT8 1623 aaKnown RBP12.51□□□□□ -0.41
SENP3-203ENST00000580231 RGL3Q3MIN7 710 aa12.51□□□□□ -0.41
SENP3-203ENST00000580231 LAMC1P11047 1609 aa12.51□□□□□ -0.41
SENP3-203ENST00000580231 SPHKAPQ2M3C7 1700 aa12.51□□□□□ -0.41
SENP3-203ENST00000580231 TK2O00142 265 aa12.5□□□□□ -0.41
SENP3-203ENST00000580231 TRPM1Q7Z4N2 1603 aa12.5□□□□□ -0.41
SENP3-203ENST00000580231 MROH1Q8NDA8 1641 aa12.5□□□□□ -0.41
SENP3-203ENST00000580231 CEP152O94986 1710 aa12.48□□□□□ -0.41
SENP3-203ENST00000580231 FRMPD1Q5SYB0 1578 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms