RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 SPHKAPQ2M3C7 1700 aa29.45■■■□□ 2.31
LIMD2-209ENST00000580222 DEFB132Q7Z7B7 95 aa29.45■■■□□ 2.31
LIMD2-209ENST00000580222 CLTCL1P53675 1640 aa29.45■■■□□ 2.3
LIMD2-209ENST00000580222 ESCO1Q5FWF5 840 aa29.44■■■□□ 2.3
LIMD2-209ENST00000580222 PXDNQ92626 1479 aa29.42■■■□□ 2.3
LIMD2-209ENST00000580222 FOXO3O43524 673 aa29.42■■■□□ 2.3
LIMD2-209ENST00000580222 NPHP3Q7Z494 1330 aa29.4■■■□□ 2.3
LIMD2-209ENST00000580222 PRAG1Q86YV5 1406 aa29.38■■■□□ 2.29
LIMD2-209ENST00000580222 BLMP54132 1417 aaPredicted RBP29.37■■■□□ 2.29
LIMD2-209ENST00000580222 RALGAPBQ86X10 1494 aa29.36■■■□□ 2.29
LIMD2-209ENST00000580222 VGFO15240 615 aaPredicted RBP29.36■■■□□ 2.29
LIMD2-209ENST00000580222 UNC5CLQ8IV45 518 aa29.36■■■□□ 2.29
LIMD2-209ENST00000580222 HFM1A2PYH4 1435 aa29.35■■■□□ 2.29
LIMD2-209ENST00000580222 GLI3P10071 1580 aa29.35■■■□□ 2.29
LIMD2-209ENST00000580222 NUTM2FA1L443 756 aa29.34■■■□□ 2.29
LIMD2-209ENST00000580222 SLIT2O94813 1529 aa29.32■■■□□ 2.28
LIMD2-209ENST00000580222 PPARGC1BQ86YN6 1023 aaKnown RBP29.31■■■□□ 2.28
LIMD2-209ENST00000580222 SEPT12Q8IYM1 358 aa29.29■■■□□ 2.28
LIMD2-209ENST00000580222 WAPLQ7Z5K2 1190 aa29.28■■■□□ 2.28
LIMD2-209ENST00000580222 CDC42BPGQ6DT37 1551 aa29.26■■■□□ 2.27
LIMD2-209ENST00000580222 MARF1Q9Y4F3 1742 aaKnown RBP29.25■■■□□ 2.27
LIMD2-209ENST00000580222 SPATA31A3Q5VYP0 1347 aa29.25■■■□□ 2.27
LIMD2-209ENST00000580222 NAIPQ13075 1403 aa29.25■■■□□ 2.27
LIMD2-209ENST00000580222 PSDA5PKW4 1024 aaPredicted RBP29.24■■■□□ 2.27
LIMD2-209ENST00000580222 RPGRIP1LQ68CZ1 1315 aa29.23■■■□□ 2.27
LIMD2-209ENST00000580222 STK26Q9P289 416 aa29.23■■■□□ 2.27
LIMD2-209ENST00000580222 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.21■■■□□ 2.27
LIMD2-209ENST00000580222 CABLES1Q8TDN4 633 aa29.21■■■□□ 2.27
LIMD2-209ENST00000580222 ONECUT3O60422 494 aaPredicted RBP29.2■■■□□ 2.26
LIMD2-209ENST00000580222 SF3B2Q13435 895 aaKnown RBP29.2■■■□□ 2.26
LIMD2-209ENST00000580222 LRPPRCP42704 1394 aaKnown RBP29.2■■■□□ 2.26
LIMD2-209ENST00000580222 PLEKHH1Q9ULM0 1364 aa29.2■■■□□ 2.26
LIMD2-209ENST00000580222 KIF1BO60333 1816 aa29.2■■■□□ 2.26
LIMD2-209ENST00000580222 BRWD3Q6RI45 1802 aa29.2■■■□□ 2.26
LIMD2-209ENST00000580222 VPS72Q15906 364 aa29.19■■■□□ 2.26
LIMD2-209ENST00000580222 ADGRF5Q8IZF2 1346 aa29.19■■■□□ 2.26
LIMD2-209ENST00000580222 PLEKHG5O94827 1062 aa29.18■■■□□ 2.26
LIMD2-209ENST00000580222 KRT28Q7Z3Y7 464 aa29.18■■■□□ 2.26
LIMD2-209ENST00000580222 LRP5O75197 1615 aa29.17■■■□□ 2.26
LIMD2-209ENST00000580222 HRCP23327 699 aa29.17■■■□□ 2.26
LIMD2-209ENST00000580222 KRT27Q7Z3Y8 459 aa29.16■■■□□ 2.26
LIMD2-209ENST00000580222 TMEM132EQ6IEE7 984 aa29.14■■■□□ 2.26
LIMD2-209ENST00000580222 USP32Q8NFA0 1604 aa29.12■■■□□ 2.25
LIMD2-209ENST00000580222 CCDC9Q9Y3X0 531 aaKnown RBP29.12■■■□□ 2.25
LIMD2-209ENST00000580222 TECPR2O15040 1411 aa29.11■■■□□ 2.25
LIMD2-209ENST00000580222 CCDC144AA2RUR9 1427 aa29.09■■■□□ 2.25
LIMD2-209ENST00000580222 PPLO60437 1756 aa29.08■■■□□ 2.25
LIMD2-209ENST00000580222 FAM83GA6ND36 823 aa29.08■■■□□ 2.25
LIMD2-209ENST00000580222 ABCC11Q96J66 1382 aa29.08■■■□□ 2.25
LIMD2-209ENST00000580222 HAP1P54257 671 aaPredicted RBP29.07■■■□□ 2.24
LIMD2-209ENST00000580222 BAG6P46379 1132 aa29.05■■■□□ 2.24
LIMD2-209ENST00000580222 EN1Q05925 392 aaPredicted RBP29.05■■■□□ 2.24
LIMD2-209ENST00000580222 SLC4A1APQ9BWU0 796 aaKnown RBP29.05■■■□□ 2.24
LIMD2-209ENST00000580222 TNS3Q68CZ2 1445 aa29.04■■■□□ 2.24
LIMD2-209ENST00000580222 FAM182BQ5T319 152 aa29.04■■■□□ 2.24
LIMD2-209ENST00000580222 PHF8Q9UPP1 1060 aa29.04■■■□□ 2.24
LIMD2-209ENST00000580222 FAM98CQ17RN3 349 aaKnown RBP29.03■■■□□ 2.24
LIMD2-209ENST00000580222 RGL3Q3MIN7 710 aa29.03■■■□□ 2.24
LIMD2-209ENST00000580222 RRBP1Q9P2E9 1410 aaKnown RBP29.03■■■□□ 2.24
LIMD2-209ENST00000580222 R3HDM1Q15032 1099 aaKnown RBP29.02■■■□□ 2.24
LIMD2-209ENST00000580222 FMN2Q9NZ56 1722 aa29.01■■■□□ 2.23
LIMD2-209ENST00000580222 LMOD2Q6P5Q4 547 aa29.01■■■□□ 2.23
LIMD2-209ENST00000580222 A0A0G2JS52 829 aa29■■■□□ 2.23
LIMD2-209ENST00000580222 MYT1Q01538 1121 aa29■■■□□ 2.23
LIMD2-209ENST00000580222 PSME1Q06323 249 aa28.99■■■□□ 2.23
LIMD2-209ENST00000580222 PLCH1Q4KWH8 1693 aa28.98■■■□□ 2.23
LIMD2-209ENST00000580222 KIF1AQ12756 1690 aa28.97■■■□□ 2.23
LIMD2-209ENST00000580222 SBNO1A3KN83 1393 aa28.97■■■□□ 2.23
LIMD2-209ENST00000580222 SPATA31E1Q6ZUB1 1445 aa28.95■■■□□ 2.23
LIMD2-209ENST00000580222 YTHDC2Q9H6S0 1430 aaKnown RBP28.95■■■□□ 2.23
LIMD2-209ENST00000580222 BTG4Q9NY30 223 aa28.94■■■□□ 2.22
LIMD2-209ENST00000580222 NWD2Q9ULI1 1742 aa28.94■■■□□ 2.22
LIMD2-209ENST00000580222 PMFBP1Q8TBY8 1022 aa28.92■■■□□ 2.22
LIMD2-209ENST00000580222 SIRT1Q96EB6 747 aa28.92■■■□□ 2.22
LIMD2-209ENST00000580222 NRXN1Q9ULB1 1477 aa28.91■■■□□ 2.22
LIMD2-209ENST00000580222 EZH2Q15910 746 aaKnown RBP28.91■■■□□ 2.22
LIMD2-209ENST00000580222 PIK3C2GO75747 1445 aa28.91■■■□□ 2.22
LIMD2-209ENST00000580222 ARHGEF10O15013 1369 aa28.9■■■□□ 2.22
LIMD2-209ENST00000580222 ANKRD30BQ9BXX2 1392 aa28.89■■■□□ 2.22
LIMD2-209ENST00000580222 ABCA3Q99758 1704 aa28.89■■■□□ 2.22
LIMD2-209ENST00000580222 SAFB2Q14151 953 aaKnown RBP eCLIP28.89■■■□□ 2.22
LIMD2-209ENST00000580222 KNDC1Q76NI1 1749 aa28.89■■■□□ 2.21
LIMD2-209ENST00000580222 RGPD8O14715 1765 aaPredicted RBP28.88■■■□□ 2.21
LIMD2-209ENST00000580222 SPATA31A5Q5VU36 1347 aa28.86■■■□□ 2.21
LIMD2-209ENST00000580222 SPATA31A7Q8IWB4 1347 aa28.86■■■□□ 2.21
LIMD2-209ENST00000580222 NRAPQ86VF7 1730 aa28.86■■■□□ 2.21
LIMD2-209ENST00000580222 CAMKK2Q96RR4 588 aa28.85■■■□□ 2.21
LIMD2-209ENST00000580222 C14orf93Q9H972 538 aaKnown RBP28.85■■■□□ 2.21
LIMD2-209ENST00000580222 PRAM1Q96QH2 718 aa28.84■■■□□ 2.21
LIMD2-209ENST00000580222 DISP2A7MBM2 1401 aa28.84■■■□□ 2.21
LIMD2-209ENST00000580222 CFAP70Q5T0N1 1121 aa28.83■■■□□ 2.21
LIMD2-209ENST00000580222 IFT172Q9UG01 1749 aa28.8■■■□□ 2.2
LIMD2-209ENST00000580222 TRIM37O94972 964 aa28.79■■■□□ 2.2
LIMD2-209ENST00000580222 RGPD1P0DJD0 1748 aa28.77■■■□□ 2.2
LIMD2-209ENST00000580222 YY1P25490 414 aa28.76■■■□□ 2.19
LIMD2-209ENST00000580222 PRR36Q9H6K5 1346 aa28.75■■■□□ 2.19
LIMD2-209ENST00000580222 TNS1Q9HBL0 1735 aaKnown RBP28.75■■■□□ 2.19
LIMD2-209ENST00000580222 THSD7AQ9UPZ6 1657 aa28.75■■■□□ 2.19
LIMD2-209ENST00000580222 DHX57Q6P158 1386 aaKnown RBP28.75■■■□□ 2.19
LIMD2-209ENST00000580222 ANKARQ7Z5J8 1434 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms