RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 C8orf37Q96NL8 207 aa20.16■□□□□ 0.82
GGA3-208ENST00000579743 AFF2P51816 1311 aa20.16■□□□□ 0.82
GGA3-208ENST00000579743 SOS2Q07890 1332 aaPredicted RBP20.16■□□□□ 0.82
GGA3-208ENST00000579743 RAB3GAP2Q9H2M9 1393 aa20.16■□□□□ 0.82
GGA3-208ENST00000579743 PIK3C2GO75747 1445 aa20.16■□□□□ 0.82
GGA3-208ENST00000579743 DHX57Q6P158 1386 aaKnown RBP20.15■□□□□ 0.82
GGA3-208ENST00000579743 TECPR2O15040 1411 aa20.15■□□□□ 0.82
GGA3-208ENST00000579743 CDC42BPGQ6DT37 1551 aa20.15■□□□□ 0.82
GGA3-208ENST00000579743 IFT172Q9UG01 1749 aa20.15■□□□□ 0.82
GGA3-208ENST00000579743 WAPLQ7Z5K2 1190 aa20.14■□□□□ 0.81
GGA3-208ENST00000579743 SIRT1Q96EB6 747 aa20.14■□□□□ 0.81
GGA3-208ENST00000579743 NGLY1Q96IV0 654 aa20.14■□□□□ 0.81
GGA3-208ENST00000579743 C14orf93Q9H972 538 aaKnown RBP20.14■□□□□ 0.81
GGA3-208ENST00000579743 YTHDC2Q9H6S0 1430 aaKnown RBP20.12■□□□□ 0.81
GGA3-208ENST00000579743 ADAMTS2O95450 1211 aa20.12■□□□□ 0.81
GGA3-208ENST00000579743 LAMC1P11047 1609 aa20.12■□□□□ 0.81
GGA3-208ENST00000579743 HRCP23327 699 aa20.1■□□□□ 0.81
GGA3-208ENST00000579743 STAC3Q96MF2 364 aa20.1■□□□□ 0.81
GGA3-208ENST00000579743 QTRT2Q9H974 415 aaKnown RBP20.1■□□□□ 0.81
GGA3-208ENST00000579743 MYOM2P54296 1465 aa20.1■□□□□ 0.81
GGA3-208ENST00000579743 FOXO3O43524 673 aa20.09■□□□□ 0.81
GGA3-208ENST00000579743 KNDC1Q76NI1 1749 aa20.09■□□□□ 0.81
GGA3-208ENST00000579743 CDK12Q9NYV4 1490 aaPredicted RBP20.08■□□□□ 0.81
GGA3-208ENST00000579743 NUTM2FA1L443 756 aa20.08■□□□□ 0.81
GGA3-208ENST00000579743 RBM6P78332 1123 aaKnown RBP20.08■□□□□ 0.81
GGA3-208ENST00000579743 CFAP70Q5T0N1 1121 aa20.08■□□□□ 0.81
GGA3-208ENST00000579743 POGKQ9P215 609 aa20.07■□□□□ 0.8
GGA3-208ENST00000579743 NRXN1Q9ULB1 1477 aa20.05■□□□□ 0.8
GGA3-208ENST00000579743 PSME1Q06323 249 aa20.04■□□□□ 0.8
GGA3-208ENST00000579743 USP21Q9UK80 565 aa20.04■□□□□ 0.8
GGA3-208ENST00000579743 PLEKHH1Q9ULM0 1364 aa20.04■□□□□ 0.8
GGA3-208ENST00000579743 XPCQ01831 940 aaPredicted RBP20.03■□□□□ 0.8
GGA3-208ENST00000579743 DCAF11Q8TEB1 546 aa20.03■□□□□ 0.8
GGA3-208ENST00000579743 PRAM1Q96QH2 718 aa20.03■□□□□ 0.8
GGA3-208ENST00000579743 TRPC5Q9UL62 973 aaPredicted RBP20.03■□□□□ 0.8
GGA3-208ENST00000579743 KDM2AQ9Y2K7 1162 aa20.03■□□□□ 0.8
GGA3-208ENST00000579743 SAFB2Q14151 953 aaKnown RBP eCLIP20.01■□□□□ 0.79
GGA3-208ENST00000579743 KIF1AQ12756 1690 aa20■□□□□ 0.79
GGA3-208ENST00000579743 PXDNQ92626 1479 aa20■□□□□ 0.79
GGA3-208ENST00000579743 HAP1P54257 671 aaPredicted RBP20■□□□□ 0.79
GGA3-208ENST00000579743 KRT28Q7Z3Y7 464 aa20■□□□□ 0.79
GGA3-208ENST00000579743 UPF1Q92900 1129 aaKnown RBP eCLIP20■□□□□ 0.79
GGA3-208ENST00000579743 PHF8Q9UPP1 1060 aa20■□□□□ 0.79
GGA3-208ENST00000579743 COL22A1Q8NFW1 1626 aaPredicted RBP20■□□□□ 0.79
GGA3-208ENST00000579743 FMN2Q9NZ56 1722 aa19.99■□□□□ 0.79
GGA3-208ENST00000579743 FNBP4Q8N3X1 1017 aaPredicted RBP19.99■□□□□ 0.79
GGA3-208ENST00000579743 DLC1Q96QB1 1528 aa19.97■□□□□ 0.79
GGA3-208ENST00000579743 EIF3AQ14152 1382 aaKnown RBP19.97■□□□□ 0.79
GGA3-208ENST00000579743 TRAK1Q9UPV9 953 aa19.97■□□□□ 0.79
GGA3-208ENST00000579743 SPATA31A3Q5VYP0 1347 aa19.97■□□□□ 0.79
GGA3-208ENST00000579743 LMOD2Q6P5Q4 547 aa19.94■□□□□ 0.78
GGA3-208ENST00000579743 ANKARQ7Z5J8 1434 aa19.93■□□□□ 0.78
GGA3-208ENST00000579743 RGS12O14924 1447 aa19.93■□□□□ 0.78
GGA3-208ENST00000579743 ARHGEF10O15013 1369 aa19.92■□□□□ 0.78
GGA3-208ENST00000579743 ATAD2Q6PL18 1390 aa19.91■□□□□ 0.78
GGA3-208ENST00000579743 MINK1Q8N4C8 1332 aaPredicted RBP19.9■□□□□ 0.78
GGA3-208ENST00000579743 SBNO1A3KN83 1393 aa19.9■□□□□ 0.78
GGA3-208ENST00000579743 GPRASP1Q5JY77 1395 aa19.9■□□□□ 0.78
GGA3-208ENST00000579743 TNS3Q68CZ2 1445 aa19.9■□□□□ 0.78
GGA3-208ENST00000579743 ADGRB1O14514 1584 aa19.89■□□□□ 0.77
GGA3-208ENST00000579743 ATRNO75882 1429 aa19.89■□□□□ 0.77
GGA3-208ENST00000579743 PMFBP1Q8TBY8 1022 aa19.89■□□□□ 0.77
GGA3-208ENST00000579743 HIRIP3Q9BW71 556 aaPredicted RBP19.89■□□□□ 0.77
GGA3-208ENST00000579743 MARF1Q9Y4F3 1742 aaKnown RBP19.88■□□□□ 0.77
GGA3-208ENST00000579743 UNC5CLQ8IV45 518 aa19.88■□□□□ 0.77
GGA3-208ENST00000579743 ADGRB2O60241 1585 aa19.87■□□□□ 0.77
GGA3-208ENST00000579743 WASLO00401 505 aaPredicted RBP19.87■□□□□ 0.77
GGA3-208ENST00000579743 GJD4Q96KN9 370 aaPredicted RBP19.87■□□□□ 0.77
GGA3-208ENST00000579743 RGPD8O14715 1765 aaPredicted RBP19.87■□□□□ 0.77
GGA3-208ENST00000579743 NGDNQ8NEJ9 315 aaKnown RBP19.86■□□□□ 0.77
GGA3-208ENST00000579743 BCL9LQ86UU0 1499 aa19.86■□□□□ 0.77
GGA3-208ENST00000579743 PLEKHG5O94827 1062 aa19.84■□□□□ 0.77
GGA3-208ENST00000579743 TULP4Q9NRJ4 1543 aa19.82■□□□□ 0.76
GGA3-208ENST00000579743 CCDC125Q86Z20 511 aa19.82■□□□□ 0.76
GGA3-208ENST00000579743 CABLES1Q8TDN4 633 aa19.82■□□□□ 0.76
GGA3-208ENST00000579743 CCDC9Q9Y3X0 531 aaKnown RBP19.82■□□□□ 0.76
GGA3-208ENST00000579743 USP32Q8NFA0 1604 aa19.82■□□□□ 0.76
GGA3-208ENST00000579743 PAK3O75914 559 aaPredicted RBP19.81■□□□□ 0.76
GGA3-208ENST00000579743 SLIT2O94813 1529 aa19.81■□□□□ 0.76
GGA3-208ENST00000579743 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.79■□□□□ 0.76
GGA3-208ENST00000579743 VPS72Q15906 364 aa19.78■□□□□ 0.76
GGA3-208ENST00000579743 NUDT16Q96DE0 195 aaKnown RBP19.78■□□□□ 0.76
GGA3-208ENST00000579743 PRR36Q9H6K5 1346 aa19.76■□□□□ 0.75
GGA3-208ENST00000579743 CDK19Q9BWU1 502 aa19.76■□□□□ 0.75
GGA3-208ENST00000579743 KIAA1210Q9ULL0 1709 aa19.76■□□□□ 0.75
GGA3-208ENST00000579743 RALGAPBQ86X10 1494 aa19.75■□□□□ 0.75
GGA3-208ENST00000579743 ARHGEF28Q8N1W1 1705 aaKnown RBP19.75■□□□□ 0.75
GGA3-208ENST00000579743 ITSN1Q15811 1721 aa19.74■□□□□ 0.75
GGA3-208ENST00000579743 CCDC61Q9Y6R9 512 aa19.74■□□□□ 0.75
GGA3-208ENST00000579743 NWD2Q9ULI1 1742 aa19.73■□□□□ 0.75
GGA3-208ENST00000579743 A0A0G2JS52 829 aa19.73■□□□□ 0.75
GGA3-208ENST00000579743 FAM83GA6ND36 823 aa19.73■□□□□ 0.75
GGA3-208ENST00000579743 MYT1Q01538 1121 aa19.73■□□□□ 0.75
GGA3-208ENST00000579743 SF3B2Q13435 895 aaKnown RBP19.73■□□□□ 0.75
GGA3-208ENST00000579743 SEPT12Q8IYM1 358 aa19.72■□□□□ 0.75
GGA3-208ENST00000579743 SRPK2P78362 688 aaKnown RBP19.71■□□□□ 0.75
GGA3-208ENST00000579743 BTG4Q9NY30 223 aa19.71■□□□□ 0.75
GGA3-208ENST00000579743 TRPM3Q9HCF6 1732 aaPredicted RBP19.71■□□□□ 0.75
GGA3-208ENST00000579743 PRDM11Q9NQV5 511 aa19.7■□□□□ 0.74
GGA3-208ENST00000579743 ZRANB1Q9UGI0 708 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms