RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 DIP2AQ14689 1571 aa7.43□□□□□ -1.22
GAPLINC-202ENST00000579007 COL16A1Q07092 1604 aaPredicted RBP7.43□□□□□ -1.22
GAPLINC-202ENST00000579007 ARHGEF1Q92888 912 aaKnown RBP7.43□□□□□ -1.22
GAPLINC-202ENST00000579007 ANKRD50Q9ULJ7 1429 aa7.43□□□□□ -1.22
GAPLINC-202ENST00000579007 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.42□□□□□ -1.22
GAPLINC-202ENST00000579007 PIP4K2BP78356 416 aa7.42□□□□□ -1.22
GAPLINC-202ENST00000579007 POLA2Q14181 598 aa7.42□□□□□ -1.22
GAPLINC-202ENST00000579007 CLTCL1P53675 1640 aa7.41□□□□□ -1.22
GAPLINC-202ENST00000579007 NALCNQ8IZF0 1738 aa7.41□□□□□ -1.22
GAPLINC-202ENST00000579007 NECTIN2Q92692 538 aa7.41□□□□□ -1.22
GAPLINC-202ENST00000579007 CHIC2Q9UKJ5 165 aa7.41□□□□□ -1.22
GAPLINC-202ENST00000579007 KANK1Q14678 1352 aa7.41□□□□□ -1.22
GAPLINC-202ENST00000579007 TESPA1A2RU30 521 aaPredicted RBP7.4□□□□□ -1.22
GAPLINC-202ENST00000579007 SHPRHQ149N8 1683 aa7.4□□□□□ -1.23
GAPLINC-202ENST00000579007 KIF1BO60333 1816 aa7.39□□□□□ -1.23
GAPLINC-202ENST00000579007 NHSL1Q5SYE7 1610 aa7.39□□□□□ -1.23
GAPLINC-202ENST00000579007 APBB1O00213 710 aa7.39□□□□□ -1.23
GAPLINC-202ENST00000579007 TOM1O60784 492 aa7.39□□□□□ -1.23
GAPLINC-202ENST00000579007 SETBP1Q9Y6X0 1596 aa7.38□□□□□ -1.23
GAPLINC-202ENST00000579007 ADAMTS13Q76LX8 1427 aa7.38□□□□□ -1.23
GAPLINC-202ENST00000579007 RIMS2Q9UQ26 1411 aa7.38□□□□□ -1.23
GAPLINC-202ENST00000579007 TMEM94Q12767 1356 aa7.38□□□□□ -1.23
GAPLINC-202ENST00000579007 BARGINQ6ZT62 677 aa7.38□□□□□ -1.23
GAPLINC-202ENST00000579007 AHDC1Q5TGY3 1603 aaPredicted RBP7.38□□□□□ -1.23
GAPLINC-202ENST00000579007 TRPM2O94759 1503 aa7.37□□□□□ -1.23
GAPLINC-202ENST00000579007 NEXMIFQ5QGS0 1516 aa7.37□□□□□ -1.23
GAPLINC-202ENST00000579007 ROCK1Q13464 1354 aa7.37□□□□□ -1.23
GAPLINC-202ENST00000579007 PLEKHG1Q9ULL1 1385 aa7.37□□□□□ -1.23
GAPLINC-202ENST00000579007 IDI1Q13907 227 aa7.37□□□□□ -1.23
GAPLINC-202ENST00000579007 TXNDC2Q86VQ3 553 aa7.37□□□□□ -1.23
GAPLINC-202ENST00000579007 ZNF692Q9BU19 519 aaPredicted RBP7.37□□□□□ -1.23
GAPLINC-202ENST00000579007 PPLO60437 1756 aa7.37□□□□□ -1.23
GAPLINC-202ENST00000579007 IFT172Q9UG01 1749 aa7.37□□□□□ -1.23
GAPLINC-202ENST00000579007 AK7Q96M32 723 aa7.36□□□□□ -1.23
GAPLINC-202ENST00000579007 FAM135BQ49AJ0 1406 aa7.35□□□□□ -1.23
GAPLINC-202ENST00000579007 LRP6O75581 1613 aa7.35□□□□□ -1.23
GAPLINC-202ENST00000579007 FLIIQ13045 1269 aa7.35□□□□□ -1.23
GAPLINC-202ENST00000579007 FAM50AQ14320 339 aaKnown RBP7.35□□□□□ -1.23
GAPLINC-202ENST00000579007 KCTD17Q8N5Z5 321 aa7.35□□□□□ -1.23
GAPLINC-202ENST00000579007 IL27Q8NEV9 243 aa7.35□□□□□ -1.23
GAPLINC-202ENST00000579007 STK24Q9Y6E0 443 aa7.35□□□□□ -1.23
GAPLINC-202ENST00000579007 PTPRUQ92729 1446 aa7.35□□□□□ -1.23
GAPLINC-202ENST00000579007 SMYD5Q6GMV2 418 aa7.34□□□□□ -1.23
GAPLINC-202ENST00000579007 CADPS2Q86UW7 1296 aa7.34□□□□□ -1.23
GAPLINC-202ENST00000579007 RBM33Q96EV2 1170 aaKnown RBP7.34□□□□□ -1.23
GAPLINC-202ENST00000579007 SLC26A8Q96RN1 970 aa7.34□□□□□ -1.23
GAPLINC-202ENST00000579007 TRAIPQ9BWF2 469 aa7.34□□□□□ -1.23
GAPLINC-202ENST00000579007 BCL11BQ9C0K0 894 aaPredicted RBP7.34□□□□□ -1.23
GAPLINC-202ENST00000579007 LAMC1P11047 1609 aa7.34□□□□□ -1.24
GAPLINC-202ENST00000579007 MKRN3Q13064 507 aaKnown RBP7.33□□□□□ -1.24
GAPLINC-202ENST00000579007 GPBP1L1Q9HC44 474 aaPredicted RBP7.33□□□□□ -1.24
GAPLINC-202ENST00000579007 RGS17Q9UGC6 210 aaPredicted RBP7.33□□□□□ -1.24
GAPLINC-202ENST00000579007 SSUH2Q9Y2M2 353 aa7.33□□□□□ -1.24
GAPLINC-202ENST00000579007 EID1Q9Y6B2 187 aa7.33□□□□□ -1.24
GAPLINC-202ENST00000579007 RRBP1Q9P2E9 1410 aaKnown RBP7.33□□□□□ -1.24
GAPLINC-202ENST00000579007 ASXL1Q8IXJ9 1541 aa7.32□□□□□ -1.24
GAPLINC-202ENST00000579007 KCNA6P17658 529 aa7.32□□□□□ -1.24
GAPLINC-202ENST00000579007 KDM4CQ9H3R0 1056 aa7.32□□□□□ -1.24
GAPLINC-202ENST00000579007 SLC52A1Q9NWF4 448 aa7.32□□□□□ -1.24
GAPLINC-202ENST00000579007 SEMA3EO15041 775 aa7.31□□□□□ -1.24
GAPLINC-202ENST00000579007 HMGB1P09429 215 aaKnown RBP7.31□□□□□ -1.24
GAPLINC-202ENST00000579007 CHRM1P11229 460 aaPredicted RBP7.31□□□□□ -1.24
GAPLINC-202ENST00000579007 NAIPQ13075 1403 aa7.31□□□□□ -1.24
GAPLINC-202ENST00000579007 KNDC1Q76NI1 1749 aa7.31□□□□□ -1.24
GAPLINC-202ENST00000579007 MSH6P52701 1360 aa7.31□□□□□ -1.24
GAPLINC-202ENST00000579007 EP400Q96L91 3159 aa7.3□□□□□ -1.24
GAPLINC-202ENST00000579007 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.3□□□□□ -1.24
GAPLINC-202ENST00000579007 SPDYE2BA6NHP3 402 aa7.3□□□□□ -1.24
GAPLINC-202ENST00000579007 SPDYE6P0CI01 402 aa7.3□□□□□ -1.24
GAPLINC-202ENST00000579007 NUBP1P53384 320 aa7.3□□□□□ -1.24
GAPLINC-202ENST00000579007 SPDYE2Q495Y8 402 aa7.3□□□□□ -1.24
GAPLINC-202ENST00000579007 ZFP91Q96JP5 570 aaPredicted RBP7.3□□□□□ -1.24
GAPLINC-202ENST00000579007 MARF1Q9Y4F3 1742 aaKnown RBP7.3□□□□□ -1.24
GAPLINC-202ENST00000579007 DCCP43146 1447 aa7.29□□□□□ -1.24
GAPLINC-202ENST00000579007 NCOA3Q9Y6Q9 1424 aa7.29□□□□□ -1.24
GAPLINC-202ENST00000579007 RAD21O60216 631 aa7.29□□□□□ -1.24
GAPLINC-202ENST00000579007 E2F4Q16254 413 aa7.29□□□□□ -1.24
GAPLINC-202ENST00000579007 RGS22Q8NE09 1264 aa7.29□□□□□ -1.24
GAPLINC-202ENST00000579007 NUP155O75694 1391 aa7.29□□□□□ -1.24
GAPLINC-202ENST00000579007 PIK3R4Q99570 1358 aa7.29□□□□□ -1.24
GAPLINC-202ENST00000579007 MST1RQ04912 1400 aa7.28□□□□□ -1.24
GAPLINC-202ENST00000579007 PRAG1Q86YV5 1406 aa7.28□□□□□ -1.24
GAPLINC-202ENST00000579007 A6NJR5 290 aa7.28□□□□□ -1.24
GAPLINC-202ENST00000579007 DCAF8Q5TAQ9 597 aa7.28□□□□□ -1.24
GAPLINC-202ENST00000579007 NUTM2DQ5VT03 806 aaPredicted RBP7.28□□□□□ -1.24
GAPLINC-202ENST00000579007 PROSER2Q86WR7 435 aaPredicted RBP7.28□□□□□ -1.24
GAPLINC-202ENST00000579007 CCDC82Q8N4S0 544 aa7.28□□□□□ -1.24
GAPLINC-202ENST00000579007 ADGRL3Q9HAR2 1447 aa7.27□□□□□ -1.24
GAPLINC-202ENST00000579007 COL22A1Q8NFW1 1626 aaPredicted RBP7.27□□□□□ -1.25
GAPLINC-202ENST00000579007 ABCA3Q99758 1704 aa7.27□□□□□ -1.25
GAPLINC-202ENST00000579007 PPP1R15AO75807 674 aaPredicted RBP7.27□□□□□ -1.25
GAPLINC-202ENST00000579007 PPARGC1BQ86YN6 1023 aaKnown RBP7.27□□□□□ -1.25
GAPLINC-202ENST00000579007 METP08581 1390 aa7.27□□□□□ -1.25
GAPLINC-202ENST00000579007 JCADQ9P266 1359 aa7.27□□□□□ -1.25
GAPLINC-202ENST00000579007 CDC42BPGQ6DT37 1551 aa7.27□□□□□ -1.25
GAPLINC-202ENST00000579007 HFM1A2PYH4 1435 aa7.27□□□□□ -1.25
GAPLINC-202ENST00000579007 PTCH1Q13635 1447 aa7.27□□□□□ -1.25
GAPLINC-202ENST00000579007 IGSF3O75054 1194 aa7.26□□□□□ -1.25
GAPLINC-202ENST00000579007 POTEAQ6S8J7 498 aa7.26□□□□□ -1.25
GAPLINC-202ENST00000579007 RNF39Q9H2S5 420 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms