RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 WAPLQ7Z5K2 1190 aa13.6□□□□□ -0.23
CDK5RAP3-211ENST00000578996 C8orf37Q96NL8 207 aa13.6□□□□□ -0.23
CDK5RAP3-211ENST00000578996 AFF2P51816 1311 aa13.59□□□□□ -0.23
CDK5RAP3-211ENST00000578996 LRPPRCP42704 1394 aaKnown RBP13.58□□□□□ -0.23
CDK5RAP3-211ENST00000578996 CDC42BPGQ6DT37 1551 aa13.58□□□□□ -0.23
CDK5RAP3-211ENST00000578996 ADAMTS2O95450 1211 aa13.58□□□□□ -0.24
CDK5RAP3-211ENST00000578996 PLEKHH1Q9ULM0 1364 aa13.58□□□□□ -0.24
CDK5RAP3-211ENST00000578996 RXRBP28702 533 aa13.57□□□□□ -0.24
CDK5RAP3-211ENST00000578996 TECPR2O15040 1411 aa13.56□□□□□ -0.24
CDK5RAP3-211ENST00000578996 YTHDC2Q9H6S0 1430 aaKnown RBP13.56□□□□□ -0.24
CDK5RAP3-211ENST00000578996 XPCQ01831 940 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP3-211ENST00000578996 SOS2Q07890 1332 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP3-211ENST00000578996 ABCC11Q96J66 1382 aa13.56□□□□□ -0.24
CDK5RAP3-211ENST00000578996 CFAP70Q5T0N1 1121 aa13.55□□□□□ -0.24
CDK5RAP3-211ENST00000578996 NPHP3Q7Z494 1330 aa13.55□□□□□ -0.24
CDK5RAP3-211ENST00000578996 KNDC1Q76NI1 1749 aa13.55□□□□□ -0.24
CDK5RAP3-211ENST00000578996 LAMC1P11047 1609 aa13.54□□□□□ -0.24
CDK5RAP3-211ENST00000578996 FOXO3O43524 673 aa13.54□□□□□ -0.24
CDK5RAP3-211ENST00000578996 SAFB2Q14151 953 aaKnown RBP eCLIP13.54□□□□□ -0.24
CDK5RAP3-211ENST00000578996 NGLY1Q96IV0 654 aa13.54□□□□□ -0.24
CDK5RAP3-211ENST00000578996 DHX57Q6P158 1386 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP3-211ENST00000578996 MYOM2P54296 1465 aa13.54□□□□□ -0.24
CDK5RAP3-211ENST00000578996 C14orf93Q9H972 538 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-211ENST00000578996 QTRT2Q9H974 415 aaKnown RBP13.52□□□□□ -0.25
CDK5RAP3-211ENST00000578996 KDM2AQ9Y2K7 1162 aa13.52□□□□□ -0.25
CDK5RAP3-211ENST00000578996 NRXN1Q9ULB1 1477 aa13.52□□□□□ -0.25
CDK5RAP3-211ENST00000578996 PXDNQ92626 1479 aa13.51□□□□□ -0.25
CDK5RAP3-211ENST00000578996 PRAM1Q96QH2 718 aa13.51□□□□□ -0.25
CDK5RAP3-211ENST00000578996 DCAF11Q8TEB1 546 aa13.5□□□□□ -0.25
CDK5RAP3-211ENST00000578996 POGKQ9P215 609 aa13.5□□□□□ -0.25
CDK5RAP3-211ENST00000578996 FMN2Q9NZ56 1722 aa13.5□□□□□ -0.25
CDK5RAP3-211ENST00000578996 USP21Q9UK80 565 aa13.49□□□□□ -0.25
CDK5RAP3-211ENST00000578996 RBM6P78332 1123 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-211ENST00000578996 SIRT1Q96EB6 747 aa13.48□□□□□ -0.25
CDK5RAP3-211ENST00000578996 TRAK1Q9UPV9 953 aa13.48□□□□□ -0.25
CDK5RAP3-211ENST00000578996 COL22A1Q8NFW1 1626 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-211ENST00000578996 CDK12Q9NYV4 1490 aaPredicted RBP13.48□□□□□ -0.25
CDK5RAP3-211ENST00000578996 RGS12O14924 1447 aa13.47□□□□□ -0.25
CDK5RAP3-211ENST00000578996 KIF1AQ12756 1690 aa13.47□□□□□ -0.25
CDK5RAP3-211ENST00000578996 PLEKHG5O94827 1062 aa13.47□□□□□ -0.25
CDK5RAP3-211ENST00000578996 UPF1Q92900 1129 aaKnown RBP eCLIP13.47□□□□□ -0.25
CDK5RAP3-211ENST00000578996 KRT28Q7Z3Y7 464 aa13.46□□□□□ -0.25
CDK5RAP3-211ENST00000578996 HIRIP3Q9BW71 556 aaPredicted RBP13.46□□□□□ -0.25
CDK5RAP3-211ENST00000578996 PHF8Q9UPP1 1060 aa13.46□□□□□ -0.25
CDK5RAP3-211ENST00000578996 HAP1P54257 671 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP3-211ENST00000578996 LMOD2Q6P5Q4 547 aa13.45□□□□□ -0.26
CDK5RAP3-211ENST00000578996 TRPC5Q9UL62 973 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP3-211ENST00000578996 DLC1Q96QB1 1528 aa13.44□□□□□ -0.26
CDK5RAP3-211ENST00000578996 SPATA31A3Q5VYP0 1347 aa13.44□□□□□ -0.26
CDK5RAP3-211ENST00000578996 HRCP23327 699 aa13.44□□□□□ -0.26
CDK5RAP3-211ENST00000578996 ADGRB1O14514 1584 aa13.44□□□□□ -0.26
CDK5RAP3-211ENST00000578996 MINK1Q8N4C8 1332 aaPredicted RBP13.43□□□□□ -0.26
CDK5RAP3-211ENST00000578996 PSME1Q06323 249 aa13.43□□□□□ -0.26
CDK5RAP3-211ENST00000578996 FNBP4Q8N3X1 1017 aaPredicted RBP13.43□□□□□ -0.26
CDK5RAP3-211ENST00000578996 PMFBP1Q8TBY8 1022 aa13.43□□□□□ -0.26
CDK5RAP3-211ENST00000578996 TNS3Q68CZ2 1445 aa13.42□□□□□ -0.26
CDK5RAP3-211ENST00000578996 RGPD8O14715 1765 aaPredicted RBP13.42□□□□□ -0.26
CDK5RAP3-211ENST00000578996 ATRNO75882 1429 aa13.4□□□□□ -0.26
CDK5RAP3-211ENST00000578996 MARF1Q9Y4F3 1742 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP3-211ENST00000578996 CABLES1Q8TDN4 633 aa13.4□□□□□ -0.26
CDK5RAP3-211ENST00000578996 STAC3Q96MF2 364 aa13.4□□□□□ -0.26
CDK5RAP3-211ENST00000578996 ADGRB2O60241 1585 aa13.4□□□□□ -0.26
CDK5RAP3-211ENST00000578996 ANKARQ7Z5J8 1434 aa13.39□□□□□ -0.27
CDK5RAP3-211ENST00000578996 BCL9LQ86UU0 1499 aa13.39□□□□□ -0.27
CDK5RAP3-211ENST00000578996 USP32Q8NFA0 1604 aa13.39□□□□□ -0.27
CDK5RAP3-211ENST00000578996 EIF3AQ14152 1382 aaKnown RBP13.38□□□□□ -0.27
CDK5RAP3-211ENST00000578996 ATAD2Q6PL18 1390 aa13.38□□□□□ -0.27
CDK5RAP3-211ENST00000578996 SBNO1A3KN83 1393 aa13.37□□□□□ -0.27
CDK5RAP3-211ENST00000578996 ARHGEF10O15013 1369 aa13.37□□□□□ -0.27
CDK5RAP3-211ENST00000578996 WASLO00401 505 aaPredicted RBP13.37□□□□□ -0.27
CDK5RAP3-211ENST00000578996 GJD4Q96KN9 370 aaPredicted RBP13.37□□□□□ -0.27
CDK5RAP3-211ENST00000578996 TULP4Q9NRJ4 1543 aa13.37□□□□□ -0.27
CDK5RAP3-211ENST00000578996 PRR36Q9H6K5 1346 aa13.37□□□□□ -0.27
CDK5RAP3-211ENST00000578996 GPRASP1Q5JY77 1395 aa13.36□□□□□ -0.27
CDK5RAP3-211ENST00000578996 UNC5CLQ8IV45 518 aa13.36□□□□□ -0.27
CDK5RAP3-211ENST00000578996 NGDNQ8NEJ9 315 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP3-211ENST00000578996 SLIT2O94813 1529 aa13.35□□□□□ -0.27
CDK5RAP3-211ENST00000578996 PAK3O75914 559 aaPredicted RBP13.35□□□□□ -0.27
CDK5RAP3-211ENST00000578996 CCDC9Q9Y3X0 531 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-211ENST00000578996 ARHGEF28Q8N1W1 1705 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-211ENST00000578996 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.33□□□□□ -0.27
CDK5RAP3-211ENST00000578996 RALGAPBQ86X10 1494 aa13.33□□□□□ -0.28
CDK5RAP3-211ENST00000578996 ABCA3Q99758 1704 aa13.33□□□□□ -0.28
CDK5RAP3-211ENST00000578996 NUDT16Q96DE0 195 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP3-211ENST00000578996 GLI3P10071 1580 aa13.32□□□□□ -0.28
CDK5RAP3-211ENST00000578996 PLCH1Q4KWH8 1693 aa13.31□□□□□ -0.28
CDK5RAP3-211ENST00000578996 ATP7BP35670 1465 aa13.31□□□□□ -0.28
CDK5RAP3-211ENST00000578996 TRPM3Q9HCF6 1732 aaPredicted RBP13.31□□□□□ -0.28
CDK5RAP3-211ENST00000578996 A0A0G2JS52 829 aa13.31□□□□□ -0.28
CDK5RAP3-211ENST00000578996 MYT1Q01538 1121 aa13.31□□□□□ -0.28
CDK5RAP3-211ENST00000578996 NBPF1Q3BBV0 1214 aa13.31□□□□□ -0.28
CDK5RAP3-211ENST00000578996 CDK19Q9BWU1 502 aa13.31□□□□□ -0.28
CDK5RAP3-211ENST00000578996 FAM83GA6ND36 823 aa13.3□□□□□ -0.28
CDK5RAP3-211ENST00000578996 ALS2Q96Q42 1657 aa13.29□□□□□ -0.28
CDK5RAP3-211ENST00000578996 VPS72Q15906 364 aa13.29□□□□□ -0.28
CDK5RAP3-211ENST00000578996 BTG4Q9NY30 223 aa13.29□□□□□ -0.28
CDK5RAP3-211ENST00000578996 ITSN1Q15811 1721 aa13.29□□□□□ -0.28
CDK5RAP3-211ENST00000578996 KIAA1210Q9ULL0 1709 aa13.29□□□□□ -0.28
CDK5RAP3-211ENST00000578996 NEUROD1Q13562 356 aa13.28□□□□□ -0.28
CDK5RAP3-211ENST00000578996 SEPT12Q8IYM1 358 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms