RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 PXDNQ92626 1479 aa17.67■□□□□ 0.42
GGA3-206ENST00000578773 CAMTA1Q9Y6Y1 1673 aa17.66■□□□□ 0.42
GGA3-206ENST00000578773 SLIT2O94813 1529 aa17.66■□□□□ 0.42
GGA3-206ENST00000578773 RGPD1P0DJD0 1748 aa17.65■□□□□ 0.42
GGA3-206ENST00000578773 ANKRD30AQ9BXX3 1397 aa17.65■□□□□ 0.42
GGA3-206ENST00000578773 SF3B2Q13435 895 aaKnown RBP17.64■□□□□ 0.41
GGA3-206ENST00000578773 R3HDM1Q15032 1099 aaKnown RBP17.64■□□□□ 0.41
GGA3-206ENST00000578773 USP32Q8NFA0 1604 aa17.63■□□□□ 0.41
GGA3-206ENST00000578773 XPCQ01831 940 aaPredicted RBP17.63■□□□□ 0.41
GGA3-206ENST00000578773 SEPT12Q8IYM1 358 aa17.63■□□□□ 0.41
GGA3-206ENST00000578773 ABCA3Q99758 1704 aa17.61■□□□□ 0.41
GGA3-206ENST00000578773 UNC5CLQ8IV45 518 aa17.6■□□□□ 0.41
GGA3-206ENST00000578773 ADGRL2O95490 1459 aa17.6■□□□□ 0.41
GGA3-206ENST00000578773 EN1Q05925 392 aaPredicted RBP17.59■□□□□ 0.41
GGA3-206ENST00000578773 NWD2Q9ULI1 1742 aa17.58■□□□□ 0.4
GGA3-206ENST00000578773 ROBO2Q9HCK4 1378 aa17.57■□□□□ 0.4
GGA3-206ENST00000578773 IFFO2Q5TF58 517 aa17.57■□□□□ 0.4
GGA3-206ENST00000578773 NEXMIFQ5QGS0 1516 aa17.57■□□□□ 0.4
GGA3-206ENST00000578773 VPS8Q8N3P4 1428 aa17.56■□□□□ 0.4
GGA3-206ENST00000578773 ANKRD50Q9ULJ7 1429 aa17.56■□□□□ 0.4
GGA3-206ENST00000578773 NRAPQ86VF7 1730 aa17.56■□□□□ 0.4
GGA3-206ENST00000578773 BAG6P46379 1132 aa17.55■□□□□ 0.4
GGA3-206ENST00000578773 FAM182BQ5T319 152 aa17.55■□□□□ 0.4
GGA3-206ENST00000578773 KRT27Q7Z3Y8 459 aa17.55■□□□□ 0.4
GGA3-206ENST00000578773 NUP188Q5SRE5 1749 aa17.53■□□□□ 0.4
GGA3-206ENST00000578773 RGPD8O14715 1765 aaPredicted RBP17.53■□□□□ 0.4
GGA3-206ENST00000578773 RREB1Q92766 1687 aa17.52■□□□□ 0.4
GGA3-206ENST00000578773 CDC42BPGQ6DT37 1551 aa17.51■□□□□ 0.39
GGA3-206ENST00000578773 CLTCL1P53675 1640 aa17.5■□□□□ 0.39
GGA3-206ENST00000578773 FOXO3O43524 673 aa17.5■□□□□ 0.39
GGA3-206ENST00000578773 EZH2Q15910 746 aaKnown RBP17.49■□□□□ 0.39
GGA3-206ENST00000578773 ESCO1Q5FWF5 840 aa17.49■□□□□ 0.39
GGA3-206ENST00000578773 NPHP3Q7Z494 1330 aa17.48■□□□□ 0.39
GGA3-206ENST00000578773 ONECUT3O60422 494 aaPredicted RBP17.48■□□□□ 0.39
GGA3-206ENST00000578773 PLEKHG5O94827 1062 aa17.48■□□□□ 0.39
GGA3-206ENST00000578773 VPS72Q15906 364 aa17.48■□□□□ 0.39
GGA3-206ENST00000578773 CCDC9Q9Y3X0 531 aaKnown RBP17.47■□□□□ 0.39
GGA3-206ENST00000578773 SENP3-EIF4A1A0A087X0R7 540 aa17.46■□□□□ 0.39
GGA3-206ENST00000578773 NUTM2FA1L443 756 aa17.46■□□□□ 0.39
GGA3-206ENST00000578773 ZNF326Q5BKZ1 582 aaKnown RBP17.46■□□□□ 0.39
GGA3-206ENST00000578773 CABLES1Q8TDN4 633 aa17.46■□□□□ 0.39
GGA3-206ENST00000578773 KIF1BO60333 1816 aa17.45■□□□□ 0.38
GGA3-206ENST00000578773 DISP2A7MBM2 1401 aa17.45■□□□□ 0.38
GGA3-206ENST00000578773 THSD7AQ9UPZ6 1657 aa17.45■□□□□ 0.38
GGA3-206ENST00000578773 FMN2Q9NZ56 1722 aa17.44■□□□□ 0.38
GGA3-206ENST00000578773 A0A0G2JS52 829 aa17.44■□□□□ 0.38
GGA3-206ENST00000578773 MYT1Q01538 1121 aa17.44■□□□□ 0.38
GGA3-206ENST00000578773 UTRNP46939 3433 aa17.44■□□□□ 0.38
GGA3-206ENST00000578773 FAM98CQ17RN3 349 aaKnown RBP17.43■□□□□ 0.38
GGA3-206ENST00000578773 SPATA31A3Q5VYP0 1347 aa17.43■□□□□ 0.38
GGA3-206ENST00000578773 CEP350Q5VT06 3117 aa17.43■□□□□ 0.38
GGA3-206ENST00000578773 KIF1AQ12756 1690 aa17.42■□□□□ 0.38
GGA3-206ENST00000578773 CHD4Q14839 1912 aa17.41■□□□□ 0.38
GGA3-206ENST00000578773 PRAG1Q86YV5 1406 aa17.41■□□□□ 0.38
GGA3-206ENST00000578773 ZNF784Q8NCA9 323 aaPredicted RBP17.41■□□□□ 0.38
GGA3-206ENST00000578773 ADGRB2O60241 1585 aa17.4■□□□□ 0.38
GGA3-206ENST00000578773 CAMKK2Q96RR4 588 aa17.4■□□□□ 0.38
GGA3-206ENST00000578773 IFT172Q9UG01 1749 aa17.39■□□□□ 0.37
GGA3-206ENST00000578773 NAIPQ13075 1403 aa17.38■□□□□ 0.37
GGA3-206ENST00000578773 PPLO60437 1756 aa17.38■□□□□ 0.37
GGA3-206ENST00000578773 HFM1A2PYH4 1435 aa17.38■□□□□ 0.37
GGA3-206ENST00000578773 NRKQ7Z2Y5 1582 aa17.36■□□□□ 0.37
GGA3-206ENST00000578773 MYOM1P52179 1685 aa17.36■□□□□ 0.37
GGA3-206ENST00000578773 FAM83GA6ND36 823 aa17.35■□□□□ 0.37
GGA3-206ENST00000578773 TNS3Q68CZ2 1445 aa17.35■□□□□ 0.37
GGA3-206ENST00000578773 CASZ1Q86V15 1759 aa17.35■□□□□ 0.37
GGA3-206ENST00000578773 NUP155O75694 1391 aa17.34■□□□□ 0.37
GGA3-206ENST00000578773 TRIM37O94972 964 aa17.34■□□□□ 0.37
GGA3-206ENST00000578773 COL14A1Q05707 1796 aaKnown RBP17.34■□□□□ 0.37
GGA3-206ENST00000578773 FAM50AQ14320 339 aaKnown RBP17.34■□□□□ 0.37
GGA3-206ENST00000578773 CRYBG1Q9Y4K1 1723 aa17.34■□□□□ 0.37
GGA3-206ENST00000578773 CCDC144AA2RUR9 1427 aa17.32■□□□□ 0.36
GGA3-206ENST00000578773 LRPPRCP42704 1394 aaKnown RBP17.32■□□□□ 0.36
GGA3-206ENST00000578773 PLEKHH1Q9ULM0 1364 aa17.32■□□□□ 0.36
GGA3-206ENST00000578773 NINLQ9Y2I6 1382 aa17.32■□□□□ 0.36
GGA3-206ENST00000578773 HAP1P54257 671 aaPredicted RBP17.32■□□□□ 0.36
GGA3-206ENST00000578773 C1QTNF8P60827 252 aa17.32■□□□□ 0.36
GGA3-206ENST00000578773 KRT28Q7Z3Y7 464 aa17.32■□□□□ 0.36
GGA3-206ENST00000578773 PPP1R1BQ9UD71 204 aaPredicted RBP17.32■□□□□ 0.36
GGA3-206ENST00000578773 TRPM3Q9HCF6 1732 aaPredicted RBP17.31■□□□□ 0.36
GGA3-206ENST00000578773 KNDC1Q76NI1 1749 aa17.3■□□□□ 0.36
GGA3-206ENST00000578773 WAPLQ7Z5K2 1190 aa17.3■□□□□ 0.36
GGA3-206ENST00000578773 APBA3O96018 575 aa17.28■□□□□ 0.36
GGA3-206ENST00000578773 BTG4Q9NY30 223 aa17.28■□□□□ 0.36
GGA3-206ENST00000578773 ALS2Q96Q42 1657 aa17.28■□□□□ 0.36
GGA3-206ENST00000578773 KCNQ2O43526 872 aa17.27■□□□□ 0.36
GGA3-206ENST00000578773 SPON1Q9HCB6 807 aa17.27■□□□□ 0.36
GGA3-206ENST00000578773 SPATA31A5Q5VU36 1347 aa17.26■□□□□ 0.35
GGA3-206ENST00000578773 SPATA31A7Q8IWB4 1347 aa17.26■□□□□ 0.35
GGA3-206ENST00000578773 LMOD2Q6P5Q4 547 aa17.25■□□□□ 0.35
GGA3-206ENST00000578773 PDGFDQ9GZP0 370 aaPredicted RBP17.24■□□□□ 0.35
GGA3-206ENST00000578773 DCAF8L1A6NGE4 600 aa17.23■□□□□ 0.35
GGA3-206ENST00000578773 STK26Q9P289 416 aa17.23■□□□□ 0.35
GGA3-206ENST00000578773 PARD3Q8TEW0 1356 aa17.23■□□□□ 0.35
GGA3-206ENST00000578773 SBF2Q86WG5 1849 aa17.23■□□□□ 0.35
GGA3-206ENST00000578773 LOC105371045A0A1W2PR82 267 aa17.22■□□□□ 0.35
GGA3-206ENST00000578773 NRXN1Q9ULB1 1477 aa17.22■□□□□ 0.35
GGA3-206ENST00000578773 SBNO1A3KN83 1393 aa17.2■□□□□ 0.34
GGA3-206ENST00000578773 TECPR2O15040 1411 aa17.2■□□□□ 0.34
GGA3-206ENST00000578773 ROCK1Q13464 1354 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms