RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 POGKQ9P215 609 aa15.89■□□□□ 0.13
CDK5RAP3-210ENST00000578733 PROSER2Q86WR7 435 aaPredicted RBP15.88■□□□□ 0.13
CDK5RAP3-210ENST00000578733 USP47Q96K76 1375 aa15.87■□□□□ 0.13
CDK5RAP3-210ENST00000578733 NCOA3Q9Y6Q9 1424 aa15.87■□□□□ 0.13
CDK5RAP3-210ENST00000578733 SLC24A1O60721 1099 aa15.87■□□□□ 0.13
CDK5RAP3-210ENST00000578733 NALCNQ8IZF0 1738 aa15.87■□□□□ 0.13
CDK5RAP3-210ENST00000578733 EIF4G2P78344 907 aaKnown RBP eCLIP15.86■□□□□ 0.13
CDK5RAP3-210ENST00000578733 CENPJQ9HC77 1338 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-210ENST00000578733 ROBO2Q9HCK4 1378 aa15.86■□□□□ 0.13
CDK5RAP3-210ENST00000578733 C14orf37Q86TY3 774 aa15.85■□□□□ 0.13
CDK5RAP3-210ENST00000578733 PRAM1Q96QH2 718 aa15.85■□□□□ 0.13
CDK5RAP3-210ENST00000578733 RGS17Q9UGC6 210 aaPredicted RBP15.85■□□□□ 0.13
CDK5RAP3-210ENST00000578733 ADGRB2O60241 1585 aa15.84■□□□□ 0.13
CDK5RAP3-210ENST00000578733 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.84■□□□□ 0.13
CDK5RAP3-210ENST00000578733 TMEM94Q12767 1356 aa15.82■□□□□ 0.12
CDK5RAP3-210ENST00000578733 CDC42BPGQ6DT37 1551 aa15.82■□□□□ 0.12
CDK5RAP3-210ENST00000578733 ITSN1Q15811 1721 aa15.82■□□□□ 0.12
CDK5RAP3-210ENST00000578733 MSH6P52701 1360 aa15.81■□□□□ 0.12
CDK5RAP3-210ENST00000578733 WAPLQ7Z5K2 1190 aa15.81■□□□□ 0.12
CDK5RAP3-210ENST00000578733 ADGRL3Q9HAR2 1447 aa15.81■□□□□ 0.12
CDK5RAP3-210ENST00000578733 FMN2Q9NZ56 1722 aa15.8■□□□□ 0.12
CDK5RAP3-210ENST00000578733 SBNO2Q9Y2G9 1366 aa15.8■□□□□ 0.12
CDK5RAP3-210ENST00000578733 SAFB2Q14151 953 aaKnown RBP eCLIP15.8■□□□□ 0.12
CDK5RAP3-210ENST00000578733 PLEKHH1Q9ULM0 1364 aa15.79■□□□□ 0.12
CDK5RAP3-210ENST00000578733 ST20-MTHFSA0A0A6YYL1 179 aa15.79■□□□□ 0.12
CDK5RAP3-210ENST00000578733 DCCP43146 1447 aa15.78■□□□□ 0.12
CDK5RAP3-210ENST00000578733 C19orf44Q9H6X5 657 aa15.78■□□□□ 0.12
CDK5RAP3-210ENST00000578733 MINK1Q8N4C8 1332 aaPredicted RBP15.77■□□□□ 0.12
CDK5RAP3-210ENST00000578733 HSPA5P11021 654 aaKnown RBP15.77■□□□□ 0.12
CDK5RAP3-210ENST00000578733 RGPD8O14715 1765 aaPredicted RBP15.77■□□□□ 0.11
CDK5RAP3-210ENST00000578733 EVC2Q86UK5 1308 aa15.76■□□□□ 0.11
CDK5RAP3-210ENST00000578733 TMF1P82094 1093 aa15.76■□□□□ 0.11
CDK5RAP3-210ENST00000578733 ATF3P18847 181 aa15.75■□□□□ 0.11
CDK5RAP3-210ENST00000578733 CDCA8Q53HL2 280 aa15.75■□□□□ 0.11
CDK5RAP3-210ENST00000578733 POTEAQ6S8J7 498 aa15.75■□□□□ 0.11
CDK5RAP3-210ENST00000578733 CADPS2Q86UW7 1296 aa15.74■□□□□ 0.11
CDK5RAP3-210ENST00000578733 RBM33Q96EV2 1170 aaKnown RBP15.74■□□□□ 0.11
CDK5RAP3-210ENST00000578733 HIRIP3Q9BW71 556 aaPredicted RBP15.73■□□□□ 0.11
CDK5RAP3-210ENST00000578733 TULP4Q9NRJ4 1543 aa15.73■□□□□ 0.11
CDK5RAP3-210ENST00000578733 WASLO00401 505 aaPredicted RBP15.72■□□□□ 0.11
CDK5RAP3-210ENST00000578733 KIF1AQ12756 1690 aa15.72■□□□□ 0.11
CDK5RAP3-210ENST00000578733 ROBO1Q9Y6N7 1651 aa15.72■□□□□ 0.11
CDK5RAP3-210ENST00000578733 ANKARQ7Z5J8 1434 aa15.71■□□□□ 0.11
CDK5RAP3-210ENST00000578733 TOPAZ1Q8N9V7 1692 aa15.71■□□□□ 0.11
CDK5RAP3-210ENST00000578733 SRPK2P78362 688 aaKnown RBP15.71■□□□□ 0.11
CDK5RAP3-210ENST00000578733 TESK2Q96S53 571 aa15.71■□□□□ 0.11
CDK5RAP3-210ENST00000578733 CDK19Q9BWU1 502 aa15.7■□□□□ 0.1
CDK5RAP3-210ENST00000578733 USP32Q8NFA0 1604 aa15.69■□□□□ 0.1
CDK5RAP3-210ENST00000578733 PUS7Q96PZ0 661 aaKnown RBP15.69■□□□□ 0.1
CDK5RAP3-210ENST00000578733 ATAD2Q6PL18 1390 aa15.69■□□□□ 0.1
CDK5RAP3-210ENST00000578733 MST1RQ04912 1400 aa15.66■□□□□ 0.1
CDK5RAP3-210ENST00000578733 ATP7BP35670 1465 aa15.65■□□□□ 0.1
CDK5RAP3-210ENST00000578733 JCADQ9P266 1359 aa15.65■□□□□ 0.1
CDK5RAP3-210ENST00000578733 NINLQ9Y2I6 1382 aa15.65■□□□□ 0.1
CDK5RAP3-210ENST00000578733 AKAP12Q02952 1782 aa15.65■□□□□ 0.1
CDK5RAP3-210ENST00000578733 MYOM1P52179 1685 aa15.65■□□□□ 0.1
CDK5RAP3-210ENST00000578733 CABP2Q9NPB3 220 aa15.65■□□□□ 0.1
CDK5RAP3-210ENST00000578733 PHLPP1O60346 1717 aa15.64■□□□□ 0.09
CDK5RAP3-210ENST00000578733 NUDT16Q96DE0 195 aaKnown RBP15.64■□□□□ 0.09
CDK5RAP3-210ENST00000578733 POLR3GLQ9BT43 218 aa15.64■□□□□ 0.09
CDK5RAP3-210ENST00000578733 C1orf167Q5SNV9 1468 aa15.64■□□□□ 0.09
CDK5RAP3-210ENST00000578733 PPIP5K1Q6PFW1 1433 aa15.63■□□□□ 0.09
CDK5RAP3-210ENST00000578733 NUTM2FA1L443 756 aa15.63■□□□□ 0.09
CDK5RAP3-210ENST00000578733 SLAIN2Q9P270 581 aa15.63■□□□□ 0.09
CDK5RAP3-210ENST00000578733 CCDC61Q9Y6R9 512 aa15.63■□□□□ 0.09
CDK5RAP3-210ENST00000578733 ESCO1Q5FWF5 840 aa15.62■□□□□ 0.09
CDK5RAP3-210ENST00000578733 NHSL1Q5SYE7 1610 aa15.61■□□□□ 0.09
CDK5RAP3-210ENST00000578733 MON2Q7Z3U7 1717 aa15.61■□□□□ 0.09
CDK5RAP3-210ENST00000578733 TMC1Q8TDI8 760 aa15.61■□□□□ 0.09
CDK5RAP3-210ENST00000578733 ZNF316A6NFI3 1004 aaPredicted RBP15.6■□□□□ 0.09
CDK5RAP3-210ENST00000578733 CCDC7Q96M83 1385 aa15.6■□□□□ 0.09
CDK5RAP3-210ENST00000578733 ZNF772Q68DY9 489 aaPredicted RBP15.59■□□□□ 0.09
CDK5RAP3-210ENST00000578733 PHF8Q9UPP1 1060 aa15.59■□□□□ 0.09
CDK5RAP3-210ENST00000578733 KIF7Q2M1P5 1343 aa15.59■□□□□ 0.09
CDK5RAP3-210ENST00000578733 SPATA31A6Q5VVP1 1343 aa15.59■□□□□ 0.09
CDK5RAP3-210ENST00000578733 PRR36Q9H6K5 1346 aa15.59■□□□□ 0.09
CDK5RAP3-210ENST00000578733 HDGFL2Q7Z4V5 671 aaPredicted RBP15.58■□□□□ 0.08
CDK5RAP3-210ENST00000578733 NGDNQ8NEJ9 315 aaKnown RBP15.58■□□□□ 0.08
CDK5RAP3-210ENST00000578733 TERF2IPQ9NYB0 399 aa15.58■□□□□ 0.08
CDK5RAP3-210ENST00000578733 COL16A1Q07092 1604 aaPredicted RBP15.57■□□□□ 0.08
CDK5RAP3-210ENST00000578733 UPF1Q92900 1129 aaKnown RBP eCLIP15.57■□□□□ 0.08
CDK5RAP3-210ENST00000578733 PLEKHG3A1L390 1219 aa15.56■□□□□ 0.08
CDK5RAP3-210ENST00000578733 ORAI2Q96SN7 254 aa15.56■□□□□ 0.08
CDK5RAP3-210ENST00000578733 ZNF692Q9BU19 519 aaPredicted RBP15.56■□□□□ 0.08
CDK5RAP3-210ENST00000578733 CABP1Q9NZU7 370 aa15.56■□□□□ 0.08
CDK5RAP3-210ENST00000578733 WASHC2AQ641Q2 1341 aa15.56■□□□□ 0.08
CDK5RAP3-210ENST00000578733 AHDC1Q5TGY3 1603 aaPredicted RBP15.56■□□□□ 0.08
CDK5RAP3-210ENST00000578733 KIF20BQ96Q89 1820 aa15.56■□□□□ 0.08
CDK5RAP3-210ENST00000578733 NPHP3Q7Z494 1330 aa15.55■□□□□ 0.08
CDK5RAP3-210ENST00000578733 C11orf95C9JLR9 678 aaPredicted RBP15.55■□□□□ 0.08
CDK5RAP3-210ENST00000578733 MEX3CQ5U5Q3 659 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-210ENST00000578733 BRINP3Q76B58 766 aa15.55■□□□□ 0.08
CDK5RAP3-210ENST00000578733 PMFBP1Q8TBY8 1022 aa15.55■□□□□ 0.08
CDK5RAP3-210ENST00000578733 POLR3AO14802 1390 aaPredicted RBP15.54■□□□□ 0.08
CDK5RAP3-210ENST00000578733 BRD4O60885 1362 aaPredicted RBP15.54■□□□□ 0.08
CDK5RAP3-210ENST00000578733 ANKRD36BQ8N2N9 1353 aa15.54■□□□□ 0.08
CDK5RAP3-210ENST00000578733 ACEP12821 1306 aa15.53■□□□□ 0.08
CDK5RAP3-210ENST00000578733 PSME1Q06323 249 aa15.53■□□□□ 0.08
CDK5RAP3-210ENST00000578733 NRKQ7Z2Y5 1582 aa15.53■□□□□ 0.08
CDK5RAP3-210ENST00000578733 KTN1Q86UP2 1357 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms