RNA–Protein interactions for RNA: ENST00000578658.1

TRAPPC8-205, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-205ENST00000578658 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.44□□□□□ -0.9
TRAPPC8-205ENST00000578658 PLEKHG3A1L390 1219 aa9.43□□□□□ -0.9
TRAPPC8-205ENST00000578658 SPTLC1O15269 473 aa9.43□□□□□ -0.9
TRAPPC8-205ENST00000578658 SLC6A16Q9GZN6 736 aa9.43□□□□□ -0.9
TRAPPC8-205ENST00000578658 MSS51Q4VC12 460 aa9.42□□□□□ -0.9
TRAPPC8-205ENST00000578658 RNF223E7ERA6 249 aa9.41□□□□□ -0.9
TRAPPC8-205ENST00000578658 RIC3Q7Z5B4 369 aa9.41□□□□□ -0.9
TRAPPC8-205ENST00000578658 USB1Q9BQ65 265 aaKnown RBP9.41□□□□□ -0.9
TRAPPC8-205ENST00000578658 RSPH6AQ9H0K4 717 aa9.41□□□□□ -0.9
TRAPPC8-205ENST00000578658 RGS20O76081 388 aa9.4□□□□□ -0.9
TRAPPC8-205ENST00000578658 SYMPKQ92797 1274 aaKnown RBP9.4□□□□□ -0.9
TRAPPC8-205ENST00000578658 PRDM9Q9NQV7 894 aa9.4□□□□□ -0.9
TRAPPC8-205ENST00000578658 TUSC1Q2TAM9 212 aa9.39□□□□□ -0.91
TRAPPC8-205ENST00000578658 RETREG3Q86VR2 466 aa9.39□□□□□ -0.91
TRAPPC8-205ENST00000578658 LIMD1Q9UGP4 676 aa9.39□□□□□ -0.91
TRAPPC8-205ENST00000578658 PCDHB15Q9Y5E8 787 aa9.39□□□□□ -0.91
TRAPPC8-205ENST00000578658 C6orf229H3BNL8 230 aa9.38□□□□□ -0.91
TRAPPC8-205ENST00000578658 SH3D19Q5HYK7 790 aa9.38□□□□□ -0.91
TRAPPC8-205ENST00000578658 PPEF1O14829 653 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC8-205ENST00000578658 CLK2P49760 499 aaKnown RBP9.37□□□□□ -0.91
TRAPPC8-205ENST00000578658 MTMR2Q13614 643 aa9.37□□□□□ -0.91
TRAPPC8-205ENST00000578658 ANKLE1Q8NAG6 615 aa9.37□□□□□ -0.91
TRAPPC8-205ENST00000578658 MMP16P51512 607 aa9.36□□□□□ -0.91
TRAPPC8-205ENST00000578658 PRPF38BQ5VTL8 546 aaKnown RBP9.36□□□□□ -0.91
TRAPPC8-205ENST00000578658 POLR3EQ9NVU0 708 aa9.36□□□□□ -0.91
TRAPPC8-205ENST00000578658 SPDYE5A6NIY4 337 aa9.35□□□□□ -0.91
TRAPPC8-205ENST00000578658 DXOO77932 396 aaKnown RBP9.35□□□□□ -0.91
TRAPPC8-205ENST00000578658 SKIV2LQ15477 1246 aaKnown RBP9.35□□□□□ -0.91
TRAPPC8-205ENST00000578658 IL27Q8NEV9 243 aa9.35□□□□□ -0.91
TRAPPC8-205ENST00000578658 ZBTB3Q9H5J0 574 aa9.35□□□□□ -0.91
TRAPPC8-205ENST00000578658 HRCP23327 699 aa9.34□□□□□ -0.91
TRAPPC8-205ENST00000578658 CSPP1Q1MSJ5 1256 aa9.34□□□□□ -0.91
TRAPPC8-205ENST00000578658 LILRB3O75022 631 aa9.33□□□□□ -0.92
TRAPPC8-205ENST00000578658 JUNDP17535 347 aa9.33□□□□□ -0.92
TRAPPC8-205ENST00000578658 QPCTQ16769 361 aa9.33□□□□□ -0.92
TRAPPC8-205ENST00000578658 CABLES1Q8TDN4 633 aa9.33□□□□□ -0.92
TRAPPC8-205ENST00000578658 FCF1Q9Y324 198 aaKnown RBP9.33□□□□□ -0.92
TRAPPC8-205ENST00000578658 PLA2G2CQ5R387 149 aa9.32□□□□□ -0.92
TRAPPC8-205ENST00000578658 PRR7Q8TB68 274 aa9.32□□□□□ -0.92
TRAPPC8-205ENST00000578658 EMID1Q96A84 441 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC8-205ENST00000578658 PRKD2Q9BZL6 878 aa9.32□□□□□ -0.92
TRAPPC8-205ENST00000578658 CFAP99D6REC4 459 aa9.31□□□□□ -0.92
TRAPPC8-205ENST00000578658 GOPCQ9HD26 462 aa9.31□□□□□ -0.92
TRAPPC8-205ENST00000578658 V9GY48 417 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC8-205ENST00000578658 DESI1Q6ICB0 168 aa9.3□□□□□ -0.92
TRAPPC8-205ENST00000578658 PROCA1Q8NCQ7 364 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC8-205ENST00000578658 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.3□□□□□ -0.92
TRAPPC8-205ENST00000578658 NUTM2BA6NNL0 878 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC8-205ENST00000578658 NUTM2EB1AL46 878 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC8-205ENST00000578658 SLC19A1P41440 591 aa9.28□□□□□ -0.92
TRAPPC8-205ENST00000578658 RTL5Q5HYW3 569 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC8-205ENST00000578658 NUTM2DQ5VT03 806 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC8-205ENST00000578658 LIAT1Q6ZQX7 453 aa9.28□□□□□ -0.92
TRAPPC8-205ENST00000578658 NUTM2AQ8IVF1 878 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC8-205ENST00000578658 FBXO31Q5XUX0 539 aaPredicted RBP9.27□□□□□ -0.93
TRAPPC8-205ENST00000578658 PTPRNQ16849 979 aa9.26□□□□□ -0.93
TRAPPC8-205ENST00000578658 RPIAP49247 311 aa9.25□□□□□ -0.93
TRAPPC8-205ENST00000578658 SPRYD7Q5W111 196 aa9.25□□□□□ -0.93
TRAPPC8-205ENST00000578658 PPP2R2DQ66LE6 453 aa9.25□□□□□ -0.93
TRAPPC8-205ENST00000578658 PCMTD1Q96MG8 357 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC8-205ENST00000578658 NUDT12Q9BQG2 462 aa9.25□□□□□ -0.93
TRAPPC8-205ENST00000578658 CCNYL3P0C7X3 344 aa9.24□□□□□ -0.93
TRAPPC8-205ENST00000578658 LYPD8Q6UX82 237 aa9.24□□□□□ -0.93
TRAPPC8-205ENST00000578658 CCDC24Q8N4L8 307 aa9.23□□□□□ -0.93
TRAPPC8-205ENST00000578658 ATP1B4Q9UN42 357 aaPredicted RBP9.23□□□□□ -0.93
TRAPPC8-205ENST00000578658 EVA1BQ9NVM1 165 aa9.22□□□□□ -0.93
TRAPPC8-205ENST00000578658 PER1O15534 1290 aaPredicted RBP9.21□□□□□ -0.94
TRAPPC8-205ENST00000578658 ZBTB24O43167 697 aaPredicted RBP9.21□□□□□ -0.94
TRAPPC8-205ENST00000578658 PTCRAQ6ISU1 281 aaPredicted RBP9.21□□□□□ -0.94
TRAPPC8-205ENST00000578658 ZNF598Q86UK7 904 aaKnown RBP9.21□□□□□ -0.94
TRAPPC8-205ENST00000578658 HELBQ8NG08 1087 aaPredicted RBP9.21□□□□□ -0.94
TRAPPC8-205ENST00000578658 TSC1Q92574 1164 aa9.21□□□□□ -0.94
TRAPPC8-205ENST00000578658 CD2BP2O95400 341 aaKnown RBP9.19□□□□□ -0.94
TRAPPC8-205ENST00000578658 RFC5P40937 340 aa9.19□□□□□ -0.94
TRAPPC8-205ENST00000578658 KCNH2Q12809 1159 aa9.19□□□□□ -0.94
TRAPPC8-205ENST00000578658 TRIM32Q13049 653 aa9.19□□□□□ -0.94
TRAPPC8-205ENST00000578658 ZNF697Q5TEC3 545 aa9.19□□□□□ -0.94
TRAPPC8-205ENST00000578658 F12P00748 615 aaPredicted RBP9.18□□□□□ -0.94
TRAPPC8-205ENST00000578658 CTDSPL2Q05D32 466 aa9.18□□□□□ -0.94
TRAPPC8-205ENST00000578658 TRIM67Q6ZTA4 783 aa9.17□□□□□ -0.94
TRAPPC8-205ENST00000578658 IRX2Q9BZI1 471 aaPredicted RBP9.16□□□□□ -0.94
TRAPPC8-205ENST00000578658 UNC93B1Q9H1C4 597 aa9.16□□□□□ -0.94
TRAPPC8-205ENST00000578658 MAP10Q9P2G4 905 aa9.16□□□□□ -0.94
TRAPPC8-205ENST00000578658 AP1G2O75843 785 aa9.15□□□□□ -0.94
TRAPPC8-205ENST00000578658 CTHP32929 405 aa9.15□□□□□ -0.94
TRAPPC8-205ENST00000578658 GDF9O60383 454 aa9.14□□□□□ -0.95
TRAPPC8-205ENST00000578658 PKD2L1Q9P0L9 805 aa9.14□□□□□ -0.95
TRAPPC8-205ENST00000578658 WNT7BP56706 349 aa9.13□□□□□ -0.95
TRAPPC8-205ENST00000578658 SKOR1P84550 965 aa9.13□□□□□ -0.95
TRAPPC8-205ENST00000578658 PRR20EP86478 221 aa9.13□□□□□ -0.95
TRAPPC8-205ENST00000578658 PRR20CP86479 221 aa9.13□□□□□ -0.95
TRAPPC8-205ENST00000578658 PRR20DP86480 221 aa9.13□□□□□ -0.95
TRAPPC8-205ENST00000578658 PRR20BP86481 221 aa9.13□□□□□ -0.95
TRAPPC8-205ENST00000578658 PRR20AP86496 221 aa9.13□□□□□ -0.95
TRAPPC8-205ENST00000578658 TMEM259Q4ZIN3 620 aa9.13□□□□□ -0.95
TRAPPC8-205ENST00000578658 LRRN4Q8WUT4 740 aa9.13□□□□□ -0.95
TRAPPC8-205ENST00000578658 PDZRN3Q9UPQ7 1066 aa9.13□□□□□ -0.95
TRAPPC8-205ENST00000578658 USP17L8P0C7I0 530 aa9.12□□□□□ -0.95
TRAPPC8-205ENST00000578658 GFRA3O60609 400 aa9.11□□□□□ -0.95
TRAPPC8-205ENST00000578658 BAP1Q92560 729 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms