RNA–Protein interactions for RNA: ENST00000578609.1

SLC6A4-204, Transcript of solute carrier family 6 member 4, humanhuman

TSL 4

Gene SLC6A4, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-204ENST00000578609 SCAF1Q9H7N4 1312 aaKnown RBP21.93■■□□□ 1.1
SLC6A4-204ENST00000578609 ADGRB2O60241 1585 aa21.92■■□□□ 1.1
SLC6A4-204ENST00000578609 NBPF1Q3BBV0 1214 aa21.92■■□□□ 1.1
SLC6A4-204ENST00000578609 SLAIN2Q9P270 581 aa21.92■■□□□ 1.1
SLC6A4-204ENST00000578609 CCER1Q8TC90 406 aaPredicted RBP21.91■■□□□ 1.1
SLC6A4-204ENST00000578609 TRAK1Q9UPV9 953 aa21.91■■□□□ 1.1
SLC6A4-204ENST00000578609 RALGAPBQ86X10 1494 aa21.9■■□□□ 1.1
SLC6A4-204ENST00000578609 NBPF8Q3BBV2 869 aa21.9■■□□□ 1.1
SLC6A4-204ENST00000578609 PRAM1Q96QH2 718 aa21.9■■□□□ 1.1
SLC6A4-204ENST00000578609 GPRASP1Q5JY77 1395 aa21.89■■□□□ 1.1
SLC6A4-204ENST00000578609 TIMELESSQ9UNS1 1208 aa21.88■■□□□ 1.09
SLC6A4-204ENST00000578609 ROCK2O75116 1388 aaKnown RBP21.87■■□□□ 1.09
SLC6A4-204ENST00000578609 FMN2Q9NZ56 1722 aa21.86■■□□□ 1.09
SLC6A4-204ENST00000578609 C1orf167Q5SNV9 1468 aa21.86■■□□□ 1.09
SLC6A4-204ENST00000578609 POGKQ9P215 609 aa21.85■■□□□ 1.09
SLC6A4-204ENST00000578609 HSPA1LP34931 641 aa21.84■■□□□ 1.09
SLC6A4-204ENST00000578609 AHDC1Q5TGY3 1603 aaPredicted RBP21.84■■□□□ 1.09
SLC6A4-204ENST00000578609 SAFB2Q14151 953 aaKnown RBP eCLIP21.82■■□□□ 1.08
SLC6A4-204ENST00000578609 BRINP3Q76B58 766 aa21.82■■□□□ 1.08
SLC6A4-204ENST00000578609 NHSL1Q5SYE7 1610 aa21.8■■□□□ 1.08
SLC6A4-204ENST00000578609 COL16A1Q07092 1604 aaPredicted RBP21.78■■□□□ 1.08
SLC6A4-204ENST00000578609 ANKARQ7Z5J8 1434 aa21.78■■□□□ 1.08
SLC6A4-204ENST00000578609 QRICH2Q9H0J4 1663 aa21.78■■□□□ 1.08
SLC6A4-204ENST00000578609 MINK1Q8N4C8 1332 aaPredicted RBP21.78■■□□□ 1.08
SLC6A4-204ENST00000578609 PHLPP1O60346 1717 aa21.77■■□□□ 1.08
SLC6A4-204ENST00000578609 EIF3AQ14152 1382 aaKnown RBP21.77■■□□□ 1.08
SLC6A4-204ENST00000578609 TULP4Q9NRJ4 1543 aa21.77■■□□□ 1.08
SLC6A4-204ENST00000578609 CENPJQ9HC77 1338 aaPredicted RBP21.77■■□□□ 1.07
SLC6A4-204ENST00000578609 USP32Q8NFA0 1604 aa21.77■■□□□ 1.07
SLC6A4-204ENST00000578609 HIRIP3Q9BW71 556 aaPredicted RBP21.74■■□□□ 1.07
SLC6A4-204ENST00000578609 CARD11Q9BXL7 1154 aa21.74■■□□□ 1.07
SLC6A4-204ENST00000578609 KIF1AQ12756 1690 aa21.74■■□□□ 1.07
SLC6A4-204ENST00000578609 WASLO00401 505 aaPredicted RBP21.73■■□□□ 1.07
SLC6A4-204ENST00000578609 ORAI2Q96SN7 254 aa21.73■■□□□ 1.07
SLC6A4-204ENST00000578609 ATP7BP35670 1465 aa21.71■■□□□ 1.07
SLC6A4-204ENST00000578609 SBNO2Q9Y2G9 1366 aa21.71■■□□□ 1.07
SLC6A4-204ENST00000578609 NUTM2FA1L443 756 aa21.7■■□□□ 1.06
SLC6A4-204ENST00000578609 ESCO1Q5FWF5 840 aa21.69■■□□□ 1.06
SLC6A4-204ENST00000578609 PRR36Q9H6K5 1346 aa21.69■■□□□ 1.06
SLC6A4-204ENST00000578609 RGPD8O14715 1765 aaPredicted RBP21.69■■□□□ 1.06
SLC6A4-204ENST00000578609 TOPAZ1Q8N9V7 1692 aa21.68■■□□□ 1.06
SLC6A4-204ENST00000578609 ITSN1Q15811 1721 aa21.66■■□□□ 1.06
SLC6A4-204ENST00000578609 PXDNQ92626 1479 aa21.66■■□□□ 1.06
SLC6A4-204ENST00000578609 SOS2Q07890 1332 aaPredicted RBP21.66■■□□□ 1.06
SLC6A4-204ENST00000578609 JCADQ9P266 1359 aa21.65■■□□□ 1.06
SLC6A4-204ENST00000578609 NPHP3Q7Z494 1330 aa21.65■■□□□ 1.06
SLC6A4-204ENST00000578609 DDX17Q92841 729 aaKnown RBP21.65■■□□□ 1.06
SLC6A4-204ENST00000578609 SHPRHQ149N8 1683 aa21.65■■□□□ 1.06
SLC6A4-204ENST00000578609 CDK19Q9BWU1 502 aa21.64■■□□□ 1.05
SLC6A4-204ENST00000578609 PHF8Q9UPP1 1060 aa21.64■■□□□ 1.05
SLC6A4-204ENST00000578609 USP47Q96K76 1375 aa21.62■■□□□ 1.05
SLC6A4-204ENST00000578609 MED1Q15648 1581 aaPredicted RBP21.61■■□□□ 1.05
SLC6A4-204ENST00000578609 EVC2Q86UK5 1308 aa21.6■■□□□ 1.05
SLC6A4-204ENST00000578609 FOXO3O43524 673 aa21.6■■□□□ 1.05
SLC6A4-204ENST00000578609 NUDT16Q96DE0 195 aaKnown RBP21.6■■□□□ 1.05
SLC6A4-204ENST00000578609 LRRC59Q96AG4 307 aaKnown RBP21.59■■□□□ 1.05
SLC6A4-204ENST00000578609 PNPLA6Q8IY17 1366 aa21.58■■□□□ 1.04
SLC6A4-204ENST00000578609 SRPK2P78362 688 aaKnown RBP21.57■■□□□ 1.04
SLC6A4-204ENST00000578609 TESK2Q96S53 571 aa21.57■■□□□ 1.04
SLC6A4-204ENST00000578609 CCDC61Q9Y6R9 512 aa21.57■■□□□ 1.04
SLC6A4-204ENST00000578609 COL22A1Q8NFW1 1626 aaPredicted RBP21.56■■□□□ 1.04
SLC6A4-204ENST00000578609 ST20-MTHFSA0A0A6YYL1 179 aa21.56■■□□□ 1.04
SLC6A4-204ENST00000578609 CABP2Q9NPB3 220 aa21.56■■□□□ 1.04
SLC6A4-204ENST00000578609 POLR3AO14802 1390 aaPredicted RBP21.56■■□□□ 1.04
SLC6A4-204ENST00000578609 SPATA31A6Q5VVP1 1343 aa21.55■■□□□ 1.04
SLC6A4-204ENST00000578609 PMFBP1Q8TBY8 1022 aa21.55■■□□□ 1.04
SLC6A4-204ENST00000578609 TRPM3Q9HCF6 1732 aaPredicted RBP21.55■■□□□ 1.04
SLC6A4-204ENST00000578609 PPIP5K1Q6PFW1 1433 aa21.55■■□□□ 1.04
SLC6A4-204ENST00000578609 SBNO1A3KN83 1393 aa21.54■■□□□ 1.04
SLC6A4-204ENST00000578609 XPCQ01831 940 aaPredicted RBP21.54■■□□□ 1.04
SLC6A4-204ENST00000578609 ATAD2Q6PL18 1390 aa21.53■■□□□ 1.04
SLC6A4-204ENST00000578609 PLEKHG3A1L390 1219 aa21.53■■□□□ 1.04
SLC6A4-204ENST00000578609 TNS3Q68CZ2 1445 aa21.53■■□□□ 1.04
SLC6A4-204ENST00000578609 LRP6O75581 1613 aa21.52■■□□□ 1.04
SLC6A4-204ENST00000578609 KRT28Q7Z3Y7 464 aa21.52■■□□□ 1.04
SLC6A4-204ENST00000578609 SPATA31A3Q5VYP0 1347 aa21.51■■□□□ 1.03
SLC6A4-204ENST00000578609 SLC24A1O60721 1099 aa21.5■■□□□ 1.03
SLC6A4-204ENST00000578609 PSME1Q06323 249 aa21.49■■□□□ 1.03
SLC6A4-204ENST00000578609 NGDNQ8NEJ9 315 aaKnown RBP21.49■■□□□ 1.03
SLC6A4-204ENST00000578609 PUS7Q96PZ0 661 aaKnown RBP21.49■■□□□ 1.03
SLC6A4-204ENST00000578609 ALS2Q96Q42 1657 aa21.49■■□□□ 1.03
SLC6A4-204ENST00000578609 ACEP12821 1306 aa21.48■■□□□ 1.03
SLC6A4-204ENST00000578609 ARHGEF10O15013 1369 aa21.47■■□□□ 1.03
SLC6A4-204ENST00000578609 CABP1Q9NZU7 370 aa21.46■■□□□ 1.03
SLC6A4-204ENST00000578609 DISP3Q9P2K9 1392 aa21.46■■□□□ 1.03
SLC6A4-204ENST00000578609 BRD4O60885 1362 aaPredicted RBP21.44■■□□□ 1.02
SLC6A4-204ENST00000578609 USP6P35125 1406 aa21.44■■□□□ 1.02
SLC6A4-204ENST00000578609 AKAP12Q02952 1782 aa21.43■■□□□ 1.02
SLC6A4-204ENST00000578609 CPSF1Q10570 1443 aaKnown RBP21.43■■□□□ 1.02
SLC6A4-204ENST00000578609 ABCA3Q99758 1704 aa21.43■■□□□ 1.02
SLC6A4-204ENST00000578609 EIF4G2P78344 907 aaKnown RBP eCLIP21.42■■□□□ 1.02
SLC6A4-204ENST00000578609 TMF1P82094 1093 aa21.42■■□□□ 1.02
SLC6A4-204ENST00000578609 NRKQ7Z2Y5 1582 aa21.42■■□□□ 1.02
SLC6A4-204ENST00000578609 CD163L1Q9NR16 1453 aa21.42■■□□□ 1.02
SLC6A4-204ENST00000578609 NINLQ9Y2I6 1382 aa21.42■■□□□ 1.02
SLC6A4-204ENST00000578609 SSH2Q76I76 1423 aa21.41■■□□□ 1.02
SLC6A4-204ENST00000578609 MON2Q7Z3U7 1717 aa21.4■■□□□ 1.02
SLC6A4-204ENST00000578609 CRYBG1Q9Y4K1 1723 aa21.4■■□□□ 1.02
SLC6A4-204ENST00000578609 NUTM2BA6NNL0 878 aaPredicted RBP21.39■■□□□ 1.01
SLC6A4-204ENST00000578609 NUTM2EB1AL46 878 aaPredicted RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms