RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 CERKQ8TCT0 537 aa19.52■□□□□ 0.72
LINC01543-201ENST00000578367 C14orf37Q86TY3 774 aa19.51■□□□□ 0.71
LINC01543-201ENST00000578367 CADPS2Q86UW7 1296 aa19.51■□□□□ 0.71
LINC01543-201ENST00000578367 PLEKHH1Q9ULM0 1364 aa19.51■□□□□ 0.71
LINC01543-201ENST00000578367 ARHGEF28Q8N1W1 1705 aaKnown RBP19.49■□□□□ 0.71
LINC01543-201ENST00000578367 ST20-MTHFSA0A0A6YYL1 179 aa19.49■□□□□ 0.71
LINC01543-201ENST00000578367 PUS7Q96PZ0 661 aaKnown RBP19.49■□□□□ 0.71
LINC01543-201ENST00000578367 ATF3P18847 181 aa19.47■□□□□ 0.71
LINC01543-201ENST00000578367 ADGRB2O60241 1585 aa19.46■□□□□ 0.71
LINC01543-201ENST00000578367 TESK2Q96S53 571 aa19.46■□□□□ 0.71
LINC01543-201ENST00000578367 EVC2Q86UK5 1308 aa19.46■□□□□ 0.71
LINC01543-201ENST00000578367 CDC42BPGQ6DT37 1551 aa19.45■□□□□ 0.7
LINC01543-201ENST00000578367 WASLO00401 505 aaPredicted RBP19.45■□□□□ 0.7
LINC01543-201ENST00000578367 HSPA5P11021 654 aaKnown RBP19.45■□□□□ 0.7
LINC01543-201ENST00000578367 SAFB2Q14151 953 aaKnown RBP eCLIP19.45■□□□□ 0.7
LINC01543-201ENST00000578367 TOM1O60784 492 aa19.44■□□□□ 0.7
LINC01543-201ENST00000578367 CDCA8Q53HL2 280 aa19.44■□□□□ 0.7
LINC01543-201ENST00000578367 RBM33Q96EV2 1170 aaKnown RBP19.44■□□□□ 0.7
LINC01543-201ENST00000578367 MINK1Q8N4C8 1332 aaPredicted RBP19.44■□□□□ 0.7
LINC01543-201ENST00000578367 TMF1P82094 1093 aa19.43■□□□□ 0.7
LINC01543-201ENST00000578367 ANKARQ7Z5J8 1434 aa19.42■□□□□ 0.7
LINC01543-201ENST00000578367 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.41■□□□□ 0.7
LINC01543-201ENST00000578367 CDK19Q9BWU1 502 aa19.4■□□□□ 0.7
LINC01543-201ENST00000578367 HIRIP3Q9BW71 556 aaPredicted RBP19.39■□□□□ 0.69
LINC01543-201ENST00000578367 ATAD2Q6PL18 1390 aa19.38■□□□□ 0.69
LINC01543-201ENST00000578367 SLAIN2Q9P270 581 aa19.38■□□□□ 0.69
LINC01543-201ENST00000578367 XIRP1Q702N8 1843 aaKnown RBP19.37■□□□□ 0.69
LINC01543-201ENST00000578367 NALCNQ8IZF0 1738 aa19.37■□□□□ 0.69
LINC01543-201ENST00000578367 QRICH2Q9H0J4 1663 aa19.37■□□□□ 0.69
LINC01543-201ENST00000578367 MST1RQ04912 1400 aa19.37■□□□□ 0.69
LINC01543-201ENST00000578367 TULP4Q9NRJ4 1543 aa19.36■□□□□ 0.69
LINC01543-201ENST00000578367 SRPK2P78362 688 aaKnown RBP19.36■□□□□ 0.69
LINC01543-201ENST00000578367 CCDC61Q9Y6R9 512 aa19.36■□□□□ 0.69
LINC01543-201ENST00000578367 C1orf167Q5SNV9 1468 aa19.35■□□□□ 0.69
LINC01543-201ENST00000578367 NINLQ9Y2I6 1382 aa19.34■□□□□ 0.69
LINC01543-201ENST00000578367 UBAP1LF5GYI3 381 aa19.34■□□□□ 0.69
LINC01543-201ENST00000578367 NUDT16Q96DE0 195 aaKnown RBP19.34■□□□□ 0.69
LINC01543-201ENST00000578367 PLEKHG3A1L390 1219 aa19.31■□□□□ 0.68
LINC01543-201ENST00000578367 CABP2Q9NPB3 220 aa19.31■□□□□ 0.68
LINC01543-201ENST00000578367 FMN2Q9NZ56 1722 aa19.31■□□□□ 0.68
LINC01543-201ENST00000578367 DISP3Q9P2K9 1392 aa19.31■□□□□ 0.68
LINC01543-201ENST00000578367 ATP7BP35670 1465 aa19.3■□□□□ 0.68
LINC01543-201ENST00000578367 PRR36Q9H6K5 1346 aa19.29■□□□□ 0.68
LINC01543-201ENST00000578367 ESCO1Q5FWF5 840 aa19.28■□□□□ 0.68
LINC01543-201ENST00000578367 BRINP3Q76B58 766 aa19.28■□□□□ 0.68
LINC01543-201ENST00000578367 PHF8Q9UPP1 1060 aa19.28■□□□□ 0.68
LINC01543-201ENST00000578367 ZNF692Q9BU19 519 aaPredicted RBP19.26■□□□□ 0.67
LINC01543-201ENST00000578367 BRD4O60885 1362 aaPredicted RBP19.26■□□□□ 0.67
LINC01543-201ENST00000578367 POLR3AO14802 1390 aaPredicted RBP19.25■□□□□ 0.67
LINC01543-201ENST00000578367 NUTM2FA1L443 756 aa19.25■□□□□ 0.67
LINC01543-201ENST00000578367 ORAI2Q96SN7 254 aa19.25■□□□□ 0.67
LINC01543-201ENST00000578367 PPIP5K1Q6PFW1 1433 aa19.25■□□□□ 0.67
LINC01543-201ENST00000578367 NPHP3Q7Z494 1330 aa19.25■□□□□ 0.67
LINC01543-201ENST00000578367 CABP1Q9NZU7 370 aa19.24■□□□□ 0.67
LINC01543-201ENST00000578367 FBXO41Q8TF61 875 aa19.23■□□□□ 0.67
LINC01543-201ENST00000578367 TERF2IPQ9NYB0 399 aa19.23■□□□□ 0.67
LINC01543-201ENST00000578367 KIF7Q2M1P5 1343 aa19.23■□□□□ 0.67
LINC01543-201ENST00000578367 USP32Q8NFA0 1604 aa19.22■□□□□ 0.67
LINC01543-201ENST00000578367 C11orf95C9JLR9 678 aaPredicted RBP19.22■□□□□ 0.67
LINC01543-201ENST00000578367 CCDC7Q96M83 1385 aa19.21■□□□□ 0.67
LINC01543-201ENST00000578367 KIF1AQ12756 1690 aa19.21■□□□□ 0.67
LINC01543-201ENST00000578367 NGDNQ8NEJ9 315 aaKnown RBP19.21■□□□□ 0.67
LINC01543-201ENST00000578367 ITSN1Q15811 1721 aa19.2■□□□□ 0.66
LINC01543-201ENST00000578367 PIP4K2BP78356 416 aa19.2■□□□□ 0.66
LINC01543-201ENST00000578367 PSME1Q06323 249 aa19.2■□□□□ 0.66
LINC01543-201ENST00000578367 HDGFL2Q7Z4V5 671 aaPredicted RBP19.2■□□□□ 0.66
LINC01543-201ENST00000578367 TMC1Q8TDI8 760 aa19.2■□□□□ 0.66
LINC01543-201ENST00000578367 ACEP12821 1306 aa19.2■□□□□ 0.66
LINC01543-201ENST00000578367 WASHC2AQ641Q2 1341 aa19.2■□□□□ 0.66
LINC01543-201ENST00000578367 CPSF1Q10570 1443 aaKnown RBP19.19■□□□□ 0.66
LINC01543-201ENST00000578367 TOPAZ1Q8N9V7 1692 aa19.19■□□□□ 0.66
LINC01543-201ENST00000578367 ANKRD36BQ8N2N9 1353 aa19.19■□□□□ 0.66
LINC01543-201ENST00000578367 FOXO3O43524 673 aa19.18■□□□□ 0.66
LINC01543-201ENST00000578367 PMFBP1Q8TBY8 1022 aa19.18■□□□□ 0.66
LINC01543-201ENST00000578367 SLC12A5Q9H2X9 1139 aa19.18■□□□□ 0.66
LINC01543-201ENST00000578367 SOS2Q07890 1332 aaPredicted RBP19.18■□□□□ 0.66
LINC01543-201ENST00000578367 ZNF316A6NFI3 1004 aaPredicted RBP19.17■□□□□ 0.66
LINC01543-201ENST00000578367 SCAF1Q9H7N4 1312 aaKnown RBP19.17■□□□□ 0.66
LINC01543-201ENST00000578367 AHDC1Q5TGY3 1603 aaPredicted RBP19.17■□□□□ 0.66
LINC01543-201ENST00000578367 SBNO1A3KN83 1393 aa19.17■□□□□ 0.66
LINC01543-201ENST00000578367 ROBO1Q9Y6N7 1651 aa19.16■□□□□ 0.66
LINC01543-201ENST00000578367 KRT28Q7Z3Y7 464 aa19.15■□□□□ 0.66
LINC01543-201ENST00000578367 LRRC59Q96AG4 307 aaKnown RBP19.14■□□□□ 0.65
LINC01543-201ENST00000578367 USP6P35125 1406 aa19.14■□□□□ 0.65
LINC01543-201ENST00000578367 POLR3GLQ9BT43 218 aa19.13■□□□□ 0.65
LINC01543-201ENST00000578367 TTC21AQ8NDW8 1320 aa19.13■□□□□ 0.65
LINC01543-201ENST00000578367 KTN1Q86UP2 1357 aaKnown RBP19.13■□□□□ 0.65
LINC01543-201ENST00000578367 CD163L1Q9NR16 1453 aa19.13■□□□□ 0.65
LINC01543-201ENST00000578367 PXDNQ92626 1479 aa19.12■□□□□ 0.65
LINC01543-201ENST00000578367 EDC4Q6P2E9 1401 aaKnown RBP19.12■□□□□ 0.65
LINC01543-201ENST00000578367 A0A1W2PP64 1363 aa19.12■□□□□ 0.65
LINC01543-201ENST00000578367 SSH2Q76I76 1423 aa19.11■□□□□ 0.65
LINC01543-201ENST00000578367 NHSL1Q5SYE7 1610 aa19.11■□□□□ 0.65
LINC01543-201ENST00000578367 ARHGEF10O15013 1369 aa19.09■□□□□ 0.65
LINC01543-201ENST00000578367 SPATA31A3Q5VYP0 1347 aa19.09■□□□□ 0.65
LINC01543-201ENST00000578367 TTC21BQ7Z4L5 1316 aa19.08■□□□□ 0.65
LINC01543-201ENST00000578367 PANK3Q9H999 370 aa19.08■□□□□ 0.64
LINC01543-201ENST00000578367 TNS3Q68CZ2 1445 aa19.08■□□□□ 0.64
LINC01543-201ENST00000578367 RGPD8O14715 1765 aaPredicted RBP19.07■□□□□ 0.64
LINC01543-201ENST00000578367 DDX17Q92841 729 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms