RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 NOB1Q9ULX3 412 aaKnown RBP17.32■□□□□ 0.36
NDEL1-204ENST00000578172 NAP1L5Q96NT1 182 aaPredicted RBP17.32■□□□□ 0.36
NDEL1-204ENST00000578172 GLIPR1L2Q4G1C9 344 aa17.31■□□□□ 0.36
NDEL1-204ENST00000578172 NKTRP30414 1462 aaKnown RBP17.31■□□□□ 0.36
NDEL1-204ENST00000578172 IDI1Q13907 227 aa17.31■□□□□ 0.36
NDEL1-204ENST00000578172 FANCAO15360 1455 aa17.31■□□□□ 0.36
NDEL1-204ENST00000578172 ADGRL1O94910 1474 aa17.3■□□□□ 0.36
NDEL1-204ENST00000578172 WDR7Q9Y4E6 1490 aa17.3■□□□□ 0.36
NDEL1-204ENST00000578172 ANKRD45Q5TZF3 282 aa17.3■□□□□ 0.36
NDEL1-204ENST00000578172 VGFO15240 615 aaPredicted RBP17.3■□□□□ 0.36
NDEL1-204ENST00000578172 C14orf37Q86TY3 774 aa17.29■□□□□ 0.36
NDEL1-204ENST00000578172 SSH1Q8WYL5 1049 aa17.29■□□□□ 0.36
NDEL1-204ENST00000578172 BLMP54132 1417 aaPredicted RBP17.29■□□□□ 0.36
NDEL1-204ENST00000578172 DCTN1Q14203 1278 aa17.29■□□□□ 0.36
NDEL1-204ENST00000578172 PRKAR2BP31323 418 aa17.28■□□□□ 0.36
NDEL1-204ENST00000578172 HDGFL2Q7Z4V5 671 aaPredicted RBP17.28■□□□□ 0.36
NDEL1-204ENST00000578172 ASXL1Q8IXJ9 1541 aa17.28■□□□□ 0.36
NDEL1-204ENST00000578172 DUOX2Q9NRD8 1548 aa17.28■□□□□ 0.36
NDEL1-204ENST00000578172 USP35Q9P2H5 1018 aa17.28■□□□□ 0.36
NDEL1-204ENST00000578172 DIAPH1O60610 1272 aaKnown RBP17.27■□□□□ 0.35
NDEL1-204ENST00000578172 PDE3AQ14432 1141 aa17.27■□□□□ 0.35
NDEL1-204ENST00000578172 RRS1Q15050 365 aaKnown RBP17.27■□□□□ 0.35
NDEL1-204ENST00000578172 TMEM57Q8N5G2 664 aa17.27■□□□□ 0.35
NDEL1-204ENST00000578172 ZRANB1Q9UGI0 708 aa17.27■□□□□ 0.35
NDEL1-204ENST00000578172 NCKAP5LQ9HCH0 1330 aa17.26■□□□□ 0.35
NDEL1-204ENST00000578172 CDC42BPBQ9Y5S2 1711 aa17.26■□□□□ 0.35
NDEL1-204ENST00000578172 NCLP19338 710 aaKnown RBP17.26■□□□□ 0.35
NDEL1-204ENST00000578172 NECTIN2Q92692 538 aa17.26■□□□□ 0.35
NDEL1-204ENST00000578172 HSP90AB1P08238 724 aaKnown RBP17.26■□□□□ 0.35
NDEL1-204ENST00000578172 TERF2IPQ9NYB0 399 aa17.26■□□□□ 0.35
NDEL1-204ENST00000578172 CROCC2H7BZ55 1655 aa17.25■□□□□ 0.35
NDEL1-204ENST00000578172 ZMYM4Q5VZL5 1548 aa17.25■□□□□ 0.35
NDEL1-204ENST00000578172 TMPOP42166 694 aaKnown RBP17.24■□□□□ 0.35
NDEL1-204ENST00000578172 FOXD4L5Q5VV16 416 aaPredicted RBP17.24■□□□□ 0.35
NDEL1-204ENST00000578172 FOXD4L4Q8WXT5 416 aaPredicted RBP17.24■□□□□ 0.35
NDEL1-204ENST00000578172 ZNF521Q96K83 1311 aa17.24■□□□□ 0.35
NDEL1-204ENST00000578172 ATP10AO60312 1499 aa17.24■□□□□ 0.35
NDEL1-204ENST00000578172 TRIM27P14373 513 aa17.24■□□□□ 0.35
NDEL1-204ENST00000578172 ZNF428Q96B54 188 aa17.24■□□□□ 0.35
NDEL1-204ENST00000578172 TRPM1Q7Z4N2 1603 aa17.23■□□□□ 0.35
NDEL1-204ENST00000578172 CDK19Q9BWU1 502 aa17.23■□□□□ 0.35
NDEL1-204ENST00000578172 MVPQ14764 893 aaKnown RBP17.23■□□□□ 0.35
NDEL1-204ENST00000578172 TXNDC2Q86VQ3 553 aa17.23■□□□□ 0.35
NDEL1-204ENST00000578172 ADCY10Q96PN6 1610 aa17.22■□□□□ 0.35
NDEL1-204ENST00000578172 HSCBQ8IWL3 235 aa17.22■□□□□ 0.35
NDEL1-204ENST00000578172 SLC4A10Q6U841 1118 aa17.22■□□□□ 0.35
NDEL1-204ENST00000578172 NOL8Q76FK4 1167 aaKnown RBP17.22■□□□□ 0.35
NDEL1-204ENST00000578172 C22orf23Q9BZE7 217 aa17.22■□□□□ 0.35
NDEL1-204ENST00000578172 EMILIN1Q9Y6C2 1016 aa17.22■□□□□ 0.35
NDEL1-204ENST00000578172 FAM83GA6ND36 823 aa17.21■□□□□ 0.35
NDEL1-204ENST00000578172 C14orf93Q9H972 538 aaKnown RBP17.21■□□□□ 0.35
NDEL1-204ENST00000578172 ARHGEF5Q12774 1597 aa17.21■□□□□ 0.34
NDEL1-204ENST00000578172 TBC1D2Q9BYX2 928 aa17.2■□□□□ 0.34
NDEL1-204ENST00000578172 OSCARQ8IYS5 282 aa17.2■□□□□ 0.34
NDEL1-204ENST00000578172 ABCC2Q92887 1545 aa17.19■□□□□ 0.34
NDEL1-204ENST00000578172 MAST1Q9Y2H9 1570 aa17.19■□□□□ 0.34
NDEL1-204ENST00000578172 LTV1Q96GA3 475 aaPredicted RBP17.19■□□□□ 0.34
NDEL1-204ENST00000578172 MIS18AQ9NYP9 233 aa17.19■□□□□ 0.34
NDEL1-204ENST00000578172 FOXD4L6Q3SYB3 417 aaPredicted RBP17.18■□□□□ 0.34
NDEL1-204ENST00000578172 NUTM2GQ5VZR2 741 aa17.18■□□□□ 0.34
NDEL1-204ENST00000578172 FOXD4L3Q6VB84 417 aaPredicted RBP17.18■□□□□ 0.34
NDEL1-204ENST00000578172 PREX2Q70Z35 1606 aa17.18■□□□□ 0.34
NDEL1-204ENST00000578172 PRDM15P57071 1507 aaPredicted RBP17.18■□□□□ 0.34
NDEL1-204ENST00000578172 ATF7IPQ6VMQ6 1270 aa17.18■□□□□ 0.34
NDEL1-204ENST00000578172 NME9Q86XW9 330 aa17.17■□□□□ 0.34
NDEL1-204ENST00000578172 FYB1O15117 783 aa17.17■□□□□ 0.34
NDEL1-204ENST00000578172 IPO8O15397 1037 aaKnown RBP17.16■□□□□ 0.34
NDEL1-204ENST00000578172 POLR1AO95602 1720 aaPredicted RBP17.16■□□□□ 0.34
NDEL1-204ENST00000578172 KRT24Q2M2I5 525 aa17.16■□□□□ 0.34
NDEL1-204ENST00000578172 DDX19BQ9UMR2 479 aa17.16■□□□□ 0.34
NDEL1-204ENST00000578172 WDR63Q8IWG1 891 aa17.15■□□□□ 0.34
NDEL1-204ENST00000578172 FAM69CQ0P6D2 419 aa17.15■□□□□ 0.34
NDEL1-204ENST00000578172 TSPYL6Q8N831 410 aa17.15■□□□□ 0.34
NDEL1-204ENST00000578172 ASXL2Q76L83 1435 aa17.15■□□□□ 0.34
NDEL1-204ENST00000578172 ERVK-7P63135 1459 aa17.15■□□□□ 0.34
NDEL1-204ENST00000578172 CHD1O14646 1710 aa17.15■□□□□ 0.34
NDEL1-204ENST00000578172 PHACTR3Q96KR7 559 aa17.15■□□□□ 0.34
NDEL1-204ENST00000578172 PIK3C2GO75747 1445 aa17.14■□□□□ 0.33
NDEL1-204ENST00000578172 STAC3Q96MF2 364 aa17.14■□□□□ 0.33
NDEL1-204ENST00000578172 CD109Q6YHK3 1445 aa17.14■□□□□ 0.33
NDEL1-204ENST00000578172 TRMT2AQ8IZ69 625 aaKnown RBP17.13■□□□□ 0.33
NDEL1-204ENST00000578172 ATAD2Q6PL18 1390 aa17.13■□□□□ 0.33
NDEL1-204ENST00000578172 ARID3AQ99856 593 aa17.13■□□□□ 0.33
NDEL1-204ENST00000578172 RBM42Q9BTD8 480 aaKnown RBP17.13■□□□□ 0.33
NDEL1-204ENST00000578172 MYO5CQ9NQX4 1742 aa17.11■□□□□ 0.33
NDEL1-204ENST00000578172 EIF2AK4Q9P2K8 1649 aaKnown RBP17.1■□□□□ 0.33
NDEL1-204ENST00000578172 PTPRTO14522 1441 aa17.1■□□□□ 0.33
NDEL1-204ENST00000578172 A0A1W2PP64 1363 aa17.1■□□□□ 0.33
NDEL1-204ENST00000578172 LMOD2Q6P5Q4 547 aa17.09■□□□□ 0.33
NDEL1-204ENST00000578172 TRIM35Q9UPQ4 493 aa17.09■□□□□ 0.33
NDEL1-204ENST00000578172 MCM10Q7L590 875 aa17.09■□□□□ 0.33
NDEL1-204ENST00000578172 SMARCA5O60264 1052 aaPredicted RBP17.09■□□□□ 0.33
NDEL1-204ENST00000578172 PANK2Q9BZ23 570 aa17.09■□□□□ 0.33
NDEL1-204ENST00000578172 TRIM44Q96DX7 344 aaPredicted RBP17.08■□□□□ 0.33
NDEL1-204ENST00000578172 GOLGA6L3A6NEY3 463 aa17.08■□□□□ 0.32
NDEL1-204ENST00000578172 RBM33Q96EV2 1170 aaKnown RBP17.08■□□□□ 0.32
NDEL1-204ENST00000578172 CLTCL1P53675 1640 aa17.08■□□□□ 0.32
NDEL1-204ENST00000578172 POLR3AO14802 1390 aaPredicted RBP17.08■□□□□ 0.32
NDEL1-204ENST00000578172 VSIG10Q8N0Z9 540 aa17.08■□□□□ 0.32
NDEL1-204ENST00000578172 COG3Q96JB2 828 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms