RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 TRIM52Q96A61 297 aa16.88■□□□□ 0.29
SMARCE1-214ENST00000578112 SIRT1Q96EB6 747 aa16.88■□□□□ 0.29
SMARCE1-214ENST00000578112 NPHP3Q7Z494 1330 aa16.88■□□□□ 0.29
SMARCE1-214ENST00000578112 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.88■□□□□ 0.29
SMARCE1-214ENST00000578112 CCDC144AA2RUR9 1427 aa16.87■□□□□ 0.29
SMARCE1-214ENST00000578112 SPATA31E1Q6ZUB1 1445 aa16.87■□□□□ 0.29
SMARCE1-214ENST00000578112 FOXD1Q16676 465 aa16.87■□□□□ 0.29
SMARCE1-214ENST00000578112 MYOM2P54296 1465 aa16.87■□□□□ 0.29
SMARCE1-214ENST00000578112 ABCC11Q96J66 1382 aa16.87■□□□□ 0.29
SMARCE1-214ENST00000578112 PXDNQ92626 1479 aa16.86■□□□□ 0.29
SMARCE1-214ENST00000578112 FNBP4Q8N3X1 1017 aaPredicted RBP16.86■□□□□ 0.29
SMARCE1-214ENST00000578112 QTRT2Q9H974 415 aaKnown RBP16.86■□□□□ 0.29
SMARCE1-214ENST00000578112 ATRNO75882 1429 aa16.85■□□□□ 0.29
SMARCE1-214ENST00000578112 ATAD2Q6PL18 1390 aa16.85■□□□□ 0.29
SMARCE1-214ENST00000578112 FMN2Q9NZ56 1722 aa16.85■□□□□ 0.29
SMARCE1-214ENST00000578112 C8orf37Q96NL8 207 aa16.85■□□□□ 0.29
SMARCE1-214ENST00000578112 TRPC5Q9UL62 973 aaPredicted RBP16.85■□□□□ 0.29
SMARCE1-214ENST00000578112 PIK3C2GO75747 1445 aa16.84■□□□□ 0.29
SMARCE1-214ENST00000578112 NRXN1Q9ULB1 1477 aa16.81■□□□□ 0.28
SMARCE1-214ENST00000578112 ORAI2Q96SN7 254 aa16.8■□□□□ 0.28
SMARCE1-214ENST00000578112 CCDC125Q86Z20 511 aa16.8■□□□□ 0.28
SMARCE1-214ENST00000578112 USP21Q9UK80 565 aa16.8■□□□□ 0.28
SMARCE1-214ENST00000578112 DLC1Q96QB1 1528 aa16.79■□□□□ 0.28
SMARCE1-214ENST00000578112 DDX17Q92841 729 aaKnown RBP16.78■□□□□ 0.28
SMARCE1-214ENST00000578112 YTHDC2Q9H6S0 1430 aaKnown RBP16.77■□□□□ 0.28
SMARCE1-214ENST00000578112 PPARGC1BQ86YN6 1023 aaKnown RBP16.77■□□□□ 0.27
SMARCE1-214ENST00000578112 ADGRF5Q8IZF2 1346 aa16.76■□□□□ 0.27
SMARCE1-214ENST00000578112 MPHOSPH9Q99550 1183 aa16.75■□□□□ 0.27
SMARCE1-214ENST00000578112 ADGRB2O60241 1585 aa16.75■□□□□ 0.27
SMARCE1-214ENST00000578112 ADAMTS2O95450 1211 aa16.75■□□□□ 0.27
SMARCE1-214ENST00000578112 ESCO1Q5FWF5 840 aa16.75■□□□□ 0.27
SMARCE1-214ENST00000578112 BCL9LQ86UU0 1499 aa16.74■□□□□ 0.27
SMARCE1-214ENST00000578112 NWD2Q9ULI1 1742 aa16.74■□□□□ 0.27
SMARCE1-214ENST00000578112 ANKARQ7Z5J8 1434 aa16.74■□□□□ 0.27
SMARCE1-214ENST00000578112 SLIT2O94813 1529 aa16.74■□□□□ 0.27
SMARCE1-214ENST00000578112 SBNO1A3KN83 1393 aa16.74■□□□□ 0.27
SMARCE1-214ENST00000578112 USP32Q8NFA0 1604 aa16.73■□□□□ 0.27
SMARCE1-214ENST00000578112 DHX57Q6P158 1386 aaKnown RBP16.73■□□□□ 0.27
SMARCE1-214ENST00000578112 C14orf93Q9H972 538 aaKnown RBP16.73■□□□□ 0.27
SMARCE1-214ENST00000578112 SPATA31A3Q5VYP0 1347 aa16.73■□□□□ 0.27
SMARCE1-214ENST00000578112 EIF3AQ14152 1382 aaKnown RBP16.73■□□□□ 0.27
SMARCE1-214ENST00000578112 STAC3Q96MF2 364 aa16.72■□□□□ 0.27
SMARCE1-214ENST00000578112 PSME1Q06323 249 aa16.71■□□□□ 0.27
SMARCE1-214ENST00000578112 TNS3Q68CZ2 1445 aa16.71■□□□□ 0.26
SMARCE1-214ENST00000578112 ARHGEF10O15013 1369 aa16.7■□□□□ 0.26
SMARCE1-214ENST00000578112 ABCA3Q99758 1704 aa16.69■□□□□ 0.26
SMARCE1-214ENST00000578112 GJD4Q96KN9 370 aaPredicted RBP16.69■□□□□ 0.26
SMARCE1-214ENST00000578112 UNC5CLQ8IV45 518 aa16.68■□□□□ 0.26
SMARCE1-214ENST00000578112 PLEKHH1Q9ULM0 1364 aa16.67■□□□□ 0.26
SMARCE1-214ENST00000578112 GLI3P10071 1580 aa16.67■□□□□ 0.26
SMARCE1-214ENST00000578112 FOXO3O43524 673 aa16.67■□□□□ 0.26
SMARCE1-214ENST00000578112 WAPLQ7Z5K2 1190 aa16.66■□□□□ 0.26
SMARCE1-214ENST00000578112 PLCH1Q4KWH8 1693 aa16.66■□□□□ 0.26
SMARCE1-214ENST00000578112 RALGAPBQ86X10 1494 aa16.66■□□□□ 0.26
SMARCE1-214ENST00000578112 RGL3Q3MIN7 710 aa16.65■□□□□ 0.26
SMARCE1-214ENST00000578112 KRT28Q7Z3Y7 464 aa16.65■□□□□ 0.26
SMARCE1-214ENST00000578112 STK26Q9P289 416 aa16.65■□□□□ 0.26
SMARCE1-214ENST00000578112 BLMP54132 1417 aaPredicted RBP16.65■□□□□ 0.26
SMARCE1-214ENST00000578112 PHF8Q9UPP1 1060 aa16.65■□□□□ 0.26
SMARCE1-214ENST00000578112 ADGRB1O14514 1584 aa16.64■□□□□ 0.25
SMARCE1-214ENST00000578112 ZRANB1Q9UGI0 708 aa16.64■□□□□ 0.25
SMARCE1-214ENST00000578112 TRPM3Q9HCF6 1732 aaPredicted RBP16.63■□□□□ 0.25
SMARCE1-214ENST00000578112 VPS72Q15906 364 aa16.63■□□□□ 0.25
SMARCE1-214ENST00000578112 RGPD8O14715 1765 aaPredicted RBP16.62■□□□□ 0.25
SMARCE1-214ENST00000578112 HRCP23327 699 aa16.62■□□□□ 0.25
SMARCE1-214ENST00000578112 TMEM132EQ6IEE7 984 aa16.62■□□□□ 0.25
SMARCE1-214ENST00000578112 TULP4Q9NRJ4 1543 aa16.61■□□□□ 0.25
SMARCE1-214ENST00000578112 ONECUT3O60422 494 aaPredicted RBP16.61■□□□□ 0.25
SMARCE1-214ENST00000578112 COL14A1Q05707 1796 aaKnown RBP16.61■□□□□ 0.25
SMARCE1-214ENST00000578112 ALS2Q96Q42 1657 aa16.61■□□□□ 0.25
SMARCE1-214ENST00000578112 NRAPQ86VF7 1730 aa16.61■□□□□ 0.25
SMARCE1-214ENST00000578112 ITSN1Q15811 1721 aa16.6■□□□□ 0.25
SMARCE1-214ENST00000578112 BRWD3Q6RI45 1802 aa16.58■□□□□ 0.24
SMARCE1-214ENST00000578112 CFAP70Q5T0N1 1121 aa16.57■□□□□ 0.24
SMARCE1-214ENST00000578112 CRYBG1Q9Y4K1 1723 aa16.57■□□□□ 0.24
SMARCE1-214ENST00000578112 XPCQ01831 940 aaPredicted RBP16.57■□□□□ 0.24
SMARCE1-214ENST00000578112 PRAM1Q96QH2 718 aa16.57■□□□□ 0.24
SMARCE1-214ENST00000578112 GPRASP1Q5JY77 1395 aa16.56■□□□□ 0.24
SMARCE1-214ENST00000578112 KIAA1210Q9ULL0 1709 aa16.56■□□□□ 0.24
SMARCE1-214ENST00000578112 LRP5O75197 1615 aa16.56■□□□□ 0.24
SMARCE1-214ENST00000578112 HAP1P54257 671 aaPredicted RBP16.56■□□□□ 0.24
SMARCE1-214ENST00000578112 POGKQ9P215 609 aa16.56■□□□□ 0.24
SMARCE1-214ENST00000578112 RAB3GAP2Q9H2M9 1393 aa16.55■□□□□ 0.24
SMARCE1-214ENST00000578112 ATP7BP35670 1465 aa16.54■□□□□ 0.24
SMARCE1-214ENST00000578112 SF3B2Q13435 895 aaKnown RBP16.53■□□□□ 0.24
SMARCE1-214ENST00000578112 RGPD1P0DJD0 1748 aa16.53■□□□□ 0.24
SMARCE1-214ENST00000578112 NUTM2FA1L443 756 aa16.53■□□□□ 0.24
SMARCE1-214ENST00000578112 ARHGEF28Q8N1W1 1705 aaKnown RBP16.53■□□□□ 0.24
SMARCE1-214ENST00000578112 SEPT12Q8IYM1 358 aa16.51■□□□□ 0.23
SMARCE1-214ENST00000578112 THSD7AQ9UPZ6 1657 aa16.51■□□□□ 0.23
SMARCE1-214ENST00000578112 WASLO00401 505 aaPredicted RBP16.5■□□□□ 0.23
SMARCE1-214ENST00000578112 KRT27Q7Z3Y8 459 aa16.5■□□□□ 0.23
SMARCE1-214ENST00000578112 TOPAZ1Q8N9V7 1692 aa16.49■□□□□ 0.23
SMARCE1-214ENST00000578112 DISP2A7MBM2 1401 aa16.49■□□□□ 0.23
SMARCE1-214ENST00000578112 BRD4O60885 1362 aaPredicted RBP16.48■□□□□ 0.23
SMARCE1-214ENST00000578112 PHRF1Q9P1Y6 1649 aaKnown RBP16.47■□□□□ 0.23
SMARCE1-214ENST00000578112 FAM83GA6ND36 823 aa16.46■□□□□ 0.23
SMARCE1-214ENST00000578112 BAG6P46379 1132 aa16.45■□□□□ 0.22
SMARCE1-214ENST00000578112 PRR36Q9H6K5 1346 aa16.45■□□□□ 0.22
SMARCE1-214ENST00000578112 POLR3AO14802 1390 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms