RNA–Protein interactions for RNA: ENST00000577940.6

DDX42-204, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 1,427 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-204ENST00000577940 XRN1Q8IZH2 1706 aaKnown RBP12.22□□□□□ -0.45
DDX42-204ENST00000577940 LRPPRCP42704 1394 aaKnown RBP12.22□□□□□ -0.45
DDX42-204ENST00000577940 ABCC11Q96J66 1382 aa12.22□□□□□ -0.45
DDX42-204ENST00000577940 RAB3GAP2Q9H2M9 1393 aa12.22□□□□□ -0.45
DDX42-204ENST00000577940 C1orf167Q5SNV9 1468 aa12.22□□□□□ -0.45
DDX42-204ENST00000577940 ASXL1Q8IXJ9 1541 aa12.22□□□□□ -0.45
DDX42-204ENST00000577940 ESCO1Q5FWF5 840 aa12.21□□□□□ -0.45
DDX42-204ENST00000577940 DDX17Q92841 729 aaKnown RBP12.21□□□□□ -0.45
DDX42-204ENST00000577940 PHLPP1O60346 1717 aa12.21□□□□□ -0.46
DDX42-204ENST00000577940 RXRBP28702 533 aa12.2□□□□□ -0.46
DDX42-204ENST00000577940 WAPLQ7Z5K2 1190 aa12.2□□□□□ -0.46
DDX42-204ENST00000577940 STAC3Q96MF2 364 aa12.2□□□□□ -0.46
DDX42-204ENST00000577940 KIF1BO60333 1816 aa12.2□□□□□ -0.46
DDX42-204ENST00000577940 COL16A1Q07092 1604 aaPredicted RBP12.19□□□□□ -0.46
DDX42-204ENST00000577940 SOS2Q07890 1332 aaPredicted RBP12.19□□□□□ -0.46
DDX42-204ENST00000577940 NPHP3Q7Z494 1330 aa12.19□□□□□ -0.46
DDX42-204ENST00000577940 DHX57Q6P158 1386 aaKnown RBP12.19□□□□□ -0.46
DDX42-204ENST00000577940 CFAP70Q5T0N1 1121 aa12.18□□□□□ -0.46
DDX42-204ENST00000577940 TECPR2O15040 1411 aa12.18□□□□□ -0.46
DDX42-204ENST00000577940 PIK3C2GO75747 1445 aa12.18□□□□□ -0.46
DDX42-204ENST00000577940 PNPLA6Q8IY17 1366 aa12.17□□□□□ -0.46
DDX42-204ENST00000577940 NGLY1Q96IV0 654 aa12.17□□□□□ -0.46
DDX42-204ENST00000577940 C8orf37Q96NL8 207 aa12.17□□□□□ -0.46
DDX42-204ENST00000577940 LRP6O75581 1613 aa12.17□□□□□ -0.46
DDX42-204ENST00000577940 AFF2P51816 1311 aa12.17□□□□□ -0.46
DDX42-204ENST00000577940 YTHDC2Q9H6S0 1430 aaKnown RBP12.16□□□□□ -0.46
DDX42-204ENST00000577940 FOXO3O43524 673 aa12.16□□□□□ -0.46
DDX42-204ENST00000577940 ADAMTS2O95450 1211 aa12.16□□□□□ -0.46
DDX42-204ENST00000577940 POGKQ9P215 609 aa12.16□□□□□ -0.46
DDX42-204ENST00000577940 QTRT2Q9H974 415 aaKnown RBP12.15□□□□□ -0.46
DDX42-204ENST00000577940 NUTM2FA1L443 756 aa12.14□□□□□ -0.47
DDX42-204ENST00000577940 DCAF11Q8TEB1 546 aa12.14□□□□□ -0.47
DDX42-204ENST00000577940 KDM2AQ9Y2K7 1162 aa12.14□□□□□ -0.47
DDX42-204ENST00000577940 RBM6P78332 1123 aaKnown RBP12.13□□□□□ -0.47
DDX42-204ENST00000577940 PRAM1Q96QH2 718 aa12.13□□□□□ -0.47
DDX42-204ENST00000577940 PLEKHH1Q9ULM0 1364 aa12.13□□□□□ -0.47
DDX42-204ENST00000577940 PSME1Q06323 249 aa12.12□□□□□ -0.47
DDX42-204ENST00000577940 MYOM2P54296 1465 aa12.12□□□□□ -0.47
DDX42-204ENST00000577940 NRXN1Q9ULB1 1477 aa12.11□□□□□ -0.47
DDX42-204ENST00000577940 SHPRHQ149N8 1683 aa12.11□□□□□ -0.47
DDX42-204ENST00000577940 XPCQ01831 940 aaPredicted RBP12.11□□□□□ -0.47
DDX42-204ENST00000577940 SAFB2Q14151 953 aaKnown RBP eCLIP12.11□□□□□ -0.47
DDX42-204ENST00000577940 KRT28Q7Z3Y7 464 aa12.11□□□□□ -0.47
DDX42-204ENST00000577940 FNBP4Q8N3X1 1017 aaPredicted RBP12.11□□□□□ -0.47
DDX42-204ENST00000577940 USP21Q9UK80 565 aa12.11□□□□□ -0.47
DDX42-204ENST00000577940 PHF8Q9UPP1 1060 aa12.11□□□□□ -0.47
DDX42-204ENST00000577940 PPLO60437 1756 aa12.1□□□□□ -0.47
DDX42-204ENST00000577940 TRPC5Q9UL62 973 aaPredicted RBP12.1□□□□□ -0.47
DDX42-204ENST00000577940 TRAK1Q9UPV9 953 aa12.1□□□□□ -0.47
DDX42-204ENST00000577940 NALCNQ8IZF0 1738 aa12.09□□□□□ -0.47
DDX42-204ENST00000577940 CDC42BPGQ6DT37 1551 aa12.09□□□□□ -0.47
DDX42-204ENST00000577940 SETD1AO15047 1707 aaKnown RBP12.08□□□□□ -0.48
DDX42-204ENST00000577940 NHSL1Q5SYE7 1610 aa12.08□□□□□ -0.48
DDX42-204ENST00000577940 CDK12Q9NYV4 1490 aaPredicted RBP12.08□□□□□ -0.48
DDX42-204ENST00000577940 SPATA31A3Q5VYP0 1347 aa12.08□□□□□ -0.48
DDX42-204ENST00000577940 HAP1P54257 671 aaPredicted RBP12.07□□□□□ -0.48
DDX42-204ENST00000577940 UPF1Q92900 1129 aaKnown RBP eCLIP12.07□□□□□ -0.48
DDX42-204ENST00000577940 EIF3AQ14152 1382 aaKnown RBP12.06□□□□□ -0.48
DDX42-204ENST00000577940 CCER1Q8TC90 406 aaPredicted RBP12.05□□□□□ -0.48
DDX42-204ENST00000577940 PXDNQ92626 1479 aa12.05□□□□□ -0.48
DDX42-204ENST00000577940 LAMC1P11047 1609 aa12.05□□□□□ -0.48
DDX42-204ENST00000577940 WASLO00401 505 aaPredicted RBP12.04□□□□□ -0.48
DDX42-204ENST00000577940 LMOD2Q6P5Q4 547 aa12.04□□□□□ -0.48
DDX42-204ENST00000577940 HIRIP3Q9BW71 556 aaPredicted RBP12.04□□□□□ -0.48
DDX42-204ENST00000577940 MINK1Q8N4C8 1332 aaPredicted RBP12.04□□□□□ -0.48
DDX42-204ENST00000577940 PMFBP1Q8TBY8 1022 aa12.03□□□□□ -0.48
DDX42-204ENST00000577940 ANKARQ7Z5J8 1434 aa12.03□□□□□ -0.48
DDX42-204ENST00000577940 SBNO1A3KN83 1393 aa12.03□□□□□ -0.48
DDX42-204ENST00000577940 GPRASP1Q5JY77 1395 aa12.03□□□□□ -0.48
DDX42-204ENST00000577940 DLC1Q96QB1 1528 aa12.03□□□□□ -0.48
DDX42-204ENST00000577940 UNC5CLQ8IV45 518 aa12.03□□□□□ -0.48
DDX42-204ENST00000577940 NGDNQ8NEJ9 315 aaKnown RBP12.03□□□□□ -0.48
DDX42-204ENST00000577940 ARHGEF10O15013 1369 aa12.02□□□□□ -0.48
DDX42-204ENST00000577940 GJD4Q96KN9 370 aaPredicted RBP12.02□□□□□ -0.49
DDX42-204ENST00000577940 ATRNO75882 1429 aa12□□□□□ -0.49
DDX42-204ENST00000577940 TNS3Q68CZ2 1445 aa12□□□□□ -0.49
DDX42-204ENST00000577940 IFT172Q9UG01 1749 aa12□□□□□ -0.49
DDX42-204ENST00000577940 ADGRB1O14514 1584 aa11.99□□□□□ -0.49
DDX42-204ENST00000577940 RGS12O14924 1447 aa11.99□□□□□ -0.49
DDX42-204ENST00000577940 CABLES1Q8TDN4 633 aa11.99□□□□□ -0.49
DDX42-204ENST00000577940 NUDT16Q96DE0 195 aaKnown RBP11.99□□□□□ -0.49
DDX42-204ENST00000577940 ATAD2Q6PL18 1390 aa11.99□□□□□ -0.49
DDX42-204ENST00000577940 BCL9LQ86UU0 1499 aa11.99□□□□□ -0.49
DDX42-204ENST00000577940 KNDC1Q76NI1 1749 aa11.98□□□□□ -0.49
DDX42-204ENST00000577940 PLEKHG5O94827 1062 aa11.98□□□□□ -0.49
DDX42-204ENST00000577940 ZEB1P37275 1124 aaPredicted RBP11.98□□□□□ -0.49
DDX42-204ENST00000577940 CDK19Q9BWU1 502 aa11.98□□□□□ -0.49
DDX42-204ENST00000577940 PAK3O75914 559 aaPredicted RBP11.97□□□□□ -0.49
DDX42-204ENST00000577940 CCDC125Q86Z20 511 aa11.97□□□□□ -0.49
DDX42-204ENST00000577940 CCDC61Q9Y6R9 512 aa11.97□□□□□ -0.49
DDX42-204ENST00000577940 PRR36Q9H6K5 1346 aa11.97□□□□□ -0.49
DDX42-204ENST00000577940 VPS72Q15906 364 aa11.96□□□□□ -0.49
DDX42-204ENST00000577940 CCDC9Q9Y3X0 531 aaKnown RBP11.96□□□□□ -0.49
DDX42-204ENST00000577940 COL22A1Q8NFW1 1626 aaPredicted RBP11.96□□□□□ -0.49
DDX42-204ENST00000577940 FAM83GA6ND36 823 aa11.95□□□□□ -0.5
DDX42-204ENST00000577940 NBPF1Q3BBV0 1214 aa11.95□□□□□ -0.5
DDX42-204ENST00000577940 KIF1AQ12756 1690 aa11.95□□□□□ -0.5
DDX42-204ENST00000577940 CLSPNQ9HAW4 1339 aa11.95□□□□□ -0.5
DDX42-204ENST00000577940 NCBP3Q53F19 620 aaKnown RBP11.94□□□□□ -0.5
DDX42-204ENST00000577940 L3MBTL2Q969R5 705 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 201.5 ms