RNA–Protein interactions for RNA: ENST00000577940.6

DDX42-204, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 1,427 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-204ENST00000577940 XRN1Q8IZH2 1706 aaKnown RBP12.22□□□□□ -0.45
DDX42-204ENST00000577940 LRPPRCP42704 1394 aaKnown RBP12.22□□□□□ -0.45
DDX42-204ENST00000577940 ABCC11Q96J66 1382 aa12.22□□□□□ -0.45
DDX42-204ENST00000577940 RAB3GAP2Q9H2M9 1393 aa12.22□□□□□ -0.45
DDX42-204ENST00000577940 C1orf167Q5SNV9 1468 aa12.22□□□□□ -0.45
DDX42-204ENST00000577940 ASXL1Q8IXJ9 1541 aa12.22□□□□□ -0.45
DDX42-204ENST00000577940 ESCO1Q5FWF5 840 aa12.21□□□□□ -0.45
DDX42-204ENST00000577940 DDX17Q92841 729 aaKnown RBP12.21□□□□□ -0.45
DDX42-204ENST00000577940 PHLPP1O60346 1717 aa12.21□□□□□ -0.46
DDX42-204ENST00000577940 RXRBP28702 533 aa12.2□□□□□ -0.46
DDX42-204ENST00000577940 WAPLQ7Z5K2 1190 aa12.2□□□□□ -0.46
DDX42-204ENST00000577940 STAC3Q96MF2 364 aa12.2□□□□□ -0.46
DDX42-204ENST00000577940 KIF1BO60333 1816 aa12.2□□□□□ -0.46
DDX42-204ENST00000577940 COL16A1Q07092 1604 aaPredicted RBP12.19□□□□□ -0.46
DDX42-204ENST00000577940 SOS2Q07890 1332 aaPredicted RBP12.19□□□□□ -0.46
DDX42-204ENST00000577940 NPHP3Q7Z494 1330 aa12.19□□□□□ -0.46
DDX42-204ENST00000577940 DHX57Q6P158 1386 aaKnown RBP12.19□□□□□ -0.46
DDX42-204ENST00000577940 CFAP70Q5T0N1 1121 aa12.18□□□□□ -0.46
DDX42-204ENST00000577940 TECPR2O15040 1411 aa12.18□□□□□ -0.46
DDX42-204ENST00000577940 PIK3C2GO75747 1445 aa12.18□□□□□ -0.46
DDX42-204ENST00000577940 PNPLA6Q8IY17 1366 aa12.17□□□□□ -0.46
DDX42-204ENST00000577940 NGLY1Q96IV0 654 aa12.17□□□□□ -0.46
DDX42-204ENST00000577940 C8orf37Q96NL8 207 aa12.17□□□□□ -0.46
DDX42-204ENST00000577940 LRP6O75581 1613 aa12.17□□□□□ -0.46
DDX42-204ENST00000577940 AFF2P51816 1311 aa12.17□□□□□ -0.46
DDX42-204ENST00000577940 YTHDC2Q9H6S0 1430 aaKnown RBP12.16□□□□□ -0.46
DDX42-204ENST00000577940 FOXO3O43524 673 aa12.16□□□□□ -0.46
DDX42-204ENST00000577940 ADAMTS2O95450 1211 aa12.16□□□□□ -0.46
DDX42-204ENST00000577940 POGKQ9P215 609 aa12.16□□□□□ -0.46
DDX42-204ENST00000577940 QTRT2Q9H974 415 aaKnown RBP12.15□□□□□ -0.46
DDX42-204ENST00000577940 NUTM2FA1L443 756 aa12.14□□□□□ -0.47
DDX42-204ENST00000577940 DCAF11Q8TEB1 546 aa12.14□□□□□ -0.47
DDX42-204ENST00000577940 KDM2AQ9Y2K7 1162 aa12.14□□□□□ -0.47
DDX42-204ENST00000577940 RBM6P78332 1123 aaKnown RBP12.13□□□□□ -0.47
DDX42-204ENST00000577940 PRAM1Q96QH2 718 aa12.13□□□□□ -0.47
DDX42-204ENST00000577940 PLEKHH1Q9ULM0 1364 aa12.13□□□□□ -0.47
DDX42-204ENST00000577940 PSME1Q06323 249 aa12.12□□□□□ -0.47
DDX42-204ENST00000577940 MYOM2P54296 1465 aa12.12□□□□□ -0.47
DDX42-204ENST00000577940 NRXN1Q9ULB1 1477 aa12.11□□□□□ -0.47
DDX42-204ENST00000577940 SHPRHQ149N8 1683 aa12.11□□□□□ -0.47
DDX42-204ENST00000577940 XPCQ01831 940 aaPredicted RBP12.11□□□□□ -0.47
DDX42-204ENST00000577940 SAFB2Q14151 953 aaKnown RBP eCLIP12.11□□□□□ -0.47
DDX42-204ENST00000577940 KRT28Q7Z3Y7 464 aa12.11□□□□□ -0.47
DDX42-204ENST00000577940 FNBP4Q8N3X1 1017 aaPredicted RBP12.11□□□□□ -0.47
DDX42-204ENST00000577940 USP21Q9UK80 565 aa12.11□□□□□ -0.47
DDX42-204ENST00000577940 PHF8Q9UPP1 1060 aa12.11□□□□□ -0.47
DDX42-204ENST00000577940 PPLO60437 1756 aa12.1□□□□□ -0.47
DDX42-204ENST00000577940 TRPC5Q9UL62 973 aaPredicted RBP12.1□□□□□ -0.47
DDX42-204ENST00000577940 TRAK1Q9UPV9 953 aa12.1□□□□□ -0.47
DDX42-204ENST00000577940 NALCNQ8IZF0 1738 aa12.09□□□□□ -0.47
DDX42-204ENST00000577940 CDC42BPGQ6DT37 1551 aa12.09□□□□□ -0.47
DDX42-204ENST00000577940 SETD1AO15047 1707 aaKnown RBP12.08□□□□□ -0.48
DDX42-204ENST00000577940 NHSL1Q5SYE7 1610 aa12.08□□□□□ -0.48
DDX42-204ENST00000577940 CDK12Q9NYV4 1490 aaPredicted RBP12.08□□□□□ -0.48
DDX42-204ENST00000577940 SPATA31A3Q5VYP0 1347 aa12.08□□□□□ -0.48
DDX42-204ENST00000577940 HAP1P54257 671 aaPredicted RBP12.07□□□□□ -0.48
DDX42-204ENST00000577940 UPF1Q92900 1129 aaKnown RBP eCLIP12.07□□□□□ -0.48
DDX42-204ENST00000577940 EIF3AQ14152 1382 aaKnown RBP12.06□□□□□ -0.48
DDX42-204ENST00000577940 CCER1Q8TC90 406 aaPredicted RBP12.05□□□□□ -0.48
DDX42-204ENST00000577940 PXDNQ92626 1479 aa12.05□□□□□ -0.48
DDX42-204ENST00000577940 LAMC1P11047 1609 aa12.05□□□□□ -0.48
DDX42-204ENST00000577940 WASLO00401 505 aaPredicted RBP12.04□□□□□ -0.48
DDX42-204ENST00000577940 LMOD2Q6P5Q4 547 aa12.04□□□□□ -0.48
DDX42-204ENST00000577940 HIRIP3Q9BW71 556 aaPredicted RBP12.04□□□□□ -0.48
DDX42-204ENST00000577940 MINK1Q8N4C8 1332 aaPredicted RBP12.04□□□□□ -0.48
DDX42-204ENST00000577940 PMFBP1Q8TBY8 1022 aa12.03□□□□□ -0.48
DDX42-204ENST00000577940 ANKARQ7Z5J8 1434 aa12.03□□□□□ -0.48
DDX42-204ENST00000577940 SBNO1A3KN83 1393 aa12.03□□□□□ -0.48
DDX42-204ENST00000577940 GPRASP1Q5JY77 1395 aa12.03□□□□□ -0.48
DDX42-204ENST00000577940 DLC1Q96QB1 1528 aa12.03□□□□□ -0.48
DDX42-204ENST00000577940 UNC5CLQ8IV45 518 aa12.03□□□□□ -0.48
DDX42-204ENST00000577940 NGDNQ8NEJ9 315 aaKnown RBP12.03□□□□□ -0.48
DDX42-204ENST00000577940 ARHGEF10O15013 1369 aa12.02□□□□□ -0.48
DDX42-204ENST00000577940 GJD4Q96KN9 370 aaPredicted RBP12.02□□□□□ -0.49
DDX42-204ENST00000577940 ATRNO75882 1429 aa12□□□□□ -0.49
DDX42-204ENST00000577940 TNS3Q68CZ2 1445 aa12□□□□□ -0.49
DDX42-204ENST00000577940 IFT172Q9UG01 1749 aa12□□□□□ -0.49
DDX42-204ENST00000577940 ADGRB1O14514 1584 aa11.99□□□□□ -0.49
DDX42-204ENST00000577940 RGS12O14924 1447 aa11.99□□□□□ -0.49
DDX42-204ENST00000577940 CABLES1Q8TDN4 633 aa11.99□□□□□ -0.49
DDX42-204ENST00000577940 NUDT16Q96DE0 195 aaKnown RBP11.99□□□□□ -0.49
DDX42-204ENST00000577940 ATAD2Q6PL18 1390 aa11.99□□□□□ -0.49
DDX42-204ENST00000577940 BCL9LQ86UU0 1499 aa11.99□□□□□ -0.49
DDX42-204ENST00000577940 KNDC1Q76NI1 1749 aa11.98□□□□□ -0.49
DDX42-204ENST00000577940 PLEKHG5O94827 1062 aa11.98□□□□□ -0.49
DDX42-204ENST00000577940 ZEB1P37275 1124 aaPredicted RBP11.98□□□□□ -0.49
DDX42-204ENST00000577940 CDK19Q9BWU1 502 aa11.98□□□□□ -0.49
DDX42-204ENST00000577940 PAK3O75914 559 aaPredicted RBP11.97□□□□□ -0.49
DDX42-204ENST00000577940 CCDC125Q86Z20 511 aa11.97□□□□□ -0.49
DDX42-204ENST00000577940 CCDC61Q9Y6R9 512 aa11.97□□□□□ -0.49
DDX42-204ENST00000577940 PRR36Q9H6K5 1346 aa11.97□□□□□ -0.49
DDX42-204ENST00000577940 VPS72Q15906 364 aa11.96□□□□□ -0.49
DDX42-204ENST00000577940 CCDC9Q9Y3X0 531 aaKnown RBP11.96□□□□□ -0.49
DDX42-204ENST00000577940 COL22A1Q8NFW1 1626 aaPredicted RBP11.96□□□□□ -0.49
DDX42-204ENST00000577940 FAM83GA6ND36 823 aa11.95□□□□□ -0.5
DDX42-204ENST00000577940 NBPF1Q3BBV0 1214 aa11.95□□□□□ -0.5
DDX42-204ENST00000577940 KIF1AQ12756 1690 aa11.95□□□□□ -0.5
DDX42-204ENST00000577940 CLSPNQ9HAW4 1339 aa11.95□□□□□ -0.5
DDX42-204ENST00000577940 NCBP3Q53F19 620 aaKnown RBP11.94□□□□□ -0.5
DDX42-204ENST00000577940 L3MBTL2Q969R5 705 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms