RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 SLAIN2Q9P270 581 aa18.18■□□□□ 0.5
CDK5RAP3-203ENST00000577442 TIMELESSQ9UNS1 1208 aa18.18■□□□□ 0.5
CDK5RAP3-203ENST00000577442 TRAK1Q9UPV9 953 aa18.18■□□□□ 0.5
CDK5RAP3-203ENST00000577442 PLEKHH1Q9ULM0 1364 aa18.17■□□□□ 0.5
CDK5RAP3-203ENST00000577442 PRAM1Q96QH2 718 aa18.17■□□□□ 0.5
CDK5RAP3-203ENST00000577442 ROBO1Q9Y6N7 1651 aa18.17■□□□□ 0.5
CDK5RAP3-203ENST00000577442 ROCK2O75116 1388 aaKnown RBP18.17■□□□□ 0.5
CDK5RAP3-203ENST00000577442 MST1RQ04912 1400 aa18.16■□□□□ 0.5
CDK5RAP3-203ENST00000577442 NBPF1Q3BBV0 1214 aa18.15■□□□□ 0.5
CDK5RAP3-203ENST00000577442 RALGAPBQ86X10 1494 aa18.14■□□□□ 0.5
CDK5RAP3-203ENST00000577442 ADGRB2O60241 1585 aa18.14■□□□□ 0.49
CDK5RAP3-203ENST00000577442 NBPF8Q3BBV2 869 aa18.13■□□□□ 0.49
CDK5RAP3-203ENST00000577442 GPRASP1Q5JY77 1395 aa18.13■□□□□ 0.49
CDK5RAP3-203ENST00000577442 SAFB2Q14151 953 aaKnown RBP eCLIP18.12■□□□□ 0.49
CDK5RAP3-203ENST00000577442 FMN2Q9NZ56 1722 aa18.12■□□□□ 0.49
CDK5RAP3-203ENST00000577442 EIF3AQ14152 1382 aaKnown RBP18.11■□□□□ 0.49
CDK5RAP3-203ENST00000577442 C1orf167Q5SNV9 1468 aa18.11■□□□□ 0.49
CDK5RAP3-203ENST00000577442 HSPA1LP34931 641 aa18.1■□□□□ 0.49
CDK5RAP3-203ENST00000577442 CENPJQ9HC77 1338 aaPredicted RBP18.08■□□□□ 0.49
CDK5RAP3-203ENST00000577442 AHDC1Q5TGY3 1603 aaPredicted RBP18.08■□□□□ 0.48
CDK5RAP3-203ENST00000577442 MINK1Q8N4C8 1332 aaPredicted RBP18.07■□□□□ 0.48
CDK5RAP3-203ENST00000577442 BRINP3Q76B58 766 aa18.07■□□□□ 0.48
CDK5RAP3-203ENST00000577442 PHLPP1O60346 1717 aa18.06■□□□□ 0.48
CDK5RAP3-203ENST00000577442 CARD11Q9BXL7 1154 aa18.06■□□□□ 0.48
CDK5RAP3-203ENST00000577442 ANKARQ7Z5J8 1434 aa18.06■□□□□ 0.48
CDK5RAP3-203ENST00000577442 QRICH2Q9H0J4 1663 aa18.06■□□□□ 0.48
CDK5RAP3-203ENST00000577442 NHSL1Q5SYE7 1610 aa18.05■□□□□ 0.48
CDK5RAP3-203ENST00000577442 KIF1AQ12756 1690 aa18.04■□□□□ 0.48
CDK5RAP3-203ENST00000577442 HIRIP3Q9BW71 556 aaPredicted RBP18.04■□□□□ 0.48
CDK5RAP3-203ENST00000577442 TULP4Q9NRJ4 1543 aa18.03■□□□□ 0.48
CDK5RAP3-203ENST00000577442 WASLO00401 505 aaPredicted RBP18.03■□□□□ 0.48
CDK5RAP3-203ENST00000577442 COL16A1Q07092 1604 aaPredicted RBP18.01■□□□□ 0.47
CDK5RAP3-203ENST00000577442 NUTM2FA1L443 756 aa18.01■□□□□ 0.47
CDK5RAP3-203ENST00000577442 ESCO1Q5FWF5 840 aa18.01■□□□□ 0.47
CDK5RAP3-203ENST00000577442 ITSN1Q15811 1721 aa18.01■□□□□ 0.47
CDK5RAP3-203ENST00000577442 ORAI2Q96SN7 254 aa18■□□□□ 0.47
CDK5RAP3-203ENST00000577442 NPHP3Q7Z494 1330 aa17.99■□□□□ 0.47
CDK5RAP3-203ENST00000577442 RGPD8O14715 1765 aaPredicted RBP17.99■□□□□ 0.47
CDK5RAP3-203ENST00000577442 USP32Q8NFA0 1604 aa17.99■□□□□ 0.47
CDK5RAP3-203ENST00000577442 SBNO2Q9Y2G9 1366 aa17.99■□□□□ 0.47
CDK5RAP3-203ENST00000577442 ATP7BP35670 1465 aa17.97■□□□□ 0.47
CDK5RAP3-203ENST00000577442 JCADQ9P266 1359 aa17.97■□□□□ 0.47
CDK5RAP3-203ENST00000577442 CDK19Q9BWU1 502 aa17.96■□□□□ 0.47
CDK5RAP3-203ENST00000577442 PHF8Q9UPP1 1060 aa17.96■□□□□ 0.47
CDK5RAP3-203ENST00000577442 EVC2Q86UK5 1308 aa17.96■□□□□ 0.46
CDK5RAP3-203ENST00000577442 PRR36Q9H6K5 1346 aa17.95■□□□□ 0.46
CDK5RAP3-203ENST00000577442 USP47Q96K76 1375 aa17.94■□□□□ 0.46
CDK5RAP3-203ENST00000577442 SRPK2P78362 688 aaKnown RBP17.94■□□□□ 0.46
CDK5RAP3-203ENST00000577442 SOS2Q07890 1332 aaPredicted RBP17.94■□□□□ 0.46
CDK5RAP3-203ENST00000577442 SHPRHQ149N8 1683 aa17.93■□□□□ 0.46
CDK5RAP3-203ENST00000577442 TOPAZ1Q8N9V7 1692 aa17.93■□□□□ 0.46
CDK5RAP3-203ENST00000577442 SLC24A1O60721 1099 aa17.93■□□□□ 0.46
CDK5RAP3-203ENST00000577442 LRRC59Q96AG4 307 aaKnown RBP17.93■□□□□ 0.46
CDK5RAP3-203ENST00000577442 NUDT16Q96DE0 195 aaKnown RBP17.93■□□□□ 0.46
CDK5RAP3-203ENST00000577442 FOXO3O43524 673 aa17.92■□□□□ 0.46
CDK5RAP3-203ENST00000577442 DDX17Q92841 729 aaKnown RBP17.92■□□□□ 0.46
CDK5RAP3-203ENST00000577442 PXDNQ92626 1479 aa17.92■□□□□ 0.46
CDK5RAP3-203ENST00000577442 CCDC61Q9Y6R9 512 aa17.91■□□□□ 0.46
CDK5RAP3-203ENST00000577442 PSME1Q06323 249 aa17.89■□□□□ 0.45
CDK5RAP3-203ENST00000577442 PMFBP1Q8TBY8 1022 aa17.89■□□□□ 0.45
CDK5RAP3-203ENST00000577442 CABP2Q9NPB3 220 aa17.89■□□□□ 0.45
CDK5RAP3-203ENST00000577442 SPATA31A6Q5VVP1 1343 aa17.89■□□□□ 0.45
CDK5RAP3-203ENST00000577442 ATAD2Q6PL18 1390 aa17.89■□□□□ 0.45
CDK5RAP3-203ENST00000577442 MED1Q15648 1581 aaPredicted RBP17.88■□□□□ 0.45
CDK5RAP3-203ENST00000577442 ST20-MTHFSA0A0A6YYL1 179 aa17.88■□□□□ 0.45
CDK5RAP3-203ENST00000577442 NGDNQ8NEJ9 315 aaKnown RBP17.88■□□□□ 0.45
CDK5RAP3-203ENST00000577442 KRT28Q7Z3Y7 464 aa17.87■□□□□ 0.45
CDK5RAP3-203ENST00000577442 PNPLA6Q8IY17 1366 aa17.87■□□□□ 0.45
CDK5RAP3-203ENST00000577442 PPIP5K1Q6PFW1 1433 aa17.87■□□□□ 0.45
CDK5RAP3-203ENST00000577442 PLEKHG3A1L390 1219 aa17.86■□□□□ 0.45
CDK5RAP3-203ENST00000577442 XPCQ01831 940 aaPredicted RBP17.86■□□□□ 0.45
CDK5RAP3-203ENST00000577442 SBNO1A3KN83 1393 aa17.86■□□□□ 0.45
CDK5RAP3-203ENST00000577442 POLR3AO14802 1390 aaPredicted RBP17.85■□□□□ 0.45
CDK5RAP3-203ENST00000577442 TNS3Q68CZ2 1445 aa17.85■□□□□ 0.45
CDK5RAP3-203ENST00000577442 COL22A1Q8NFW1 1626 aaPredicted RBP17.84■□□□□ 0.45
CDK5RAP3-203ENST00000577442 PUS7Q96PZ0 661 aaKnown RBP17.84■□□□□ 0.45
CDK5RAP3-203ENST00000577442 TESK2Q96S53 571 aa17.84■□□□□ 0.45
CDK5RAP3-203ENST00000577442 ARHGEF10O15013 1369 aa17.83■□□□□ 0.45
CDK5RAP3-203ENST00000577442 SPATA31A3Q5VYP0 1347 aa17.83■□□□□ 0.44
CDK5RAP3-203ENST00000577442 TRPM3Q9HCF6 1732 aaPredicted RBP17.83■□□□□ 0.44
CDK5RAP3-203ENST00000577442 ACEP12821 1306 aa17.82■□□□□ 0.44
CDK5RAP3-203ENST00000577442 EIF4G2P78344 907 aaKnown RBP eCLIP17.82■□□□□ 0.44
CDK5RAP3-203ENST00000577442 TMF1P82094 1093 aa17.82■□□□□ 0.44
CDK5RAP3-203ENST00000577442 BRD4O60885 1362 aaPredicted RBP17.81■□□□□ 0.44
CDK5RAP3-203ENST00000577442 CDCA8Q53HL2 280 aa17.81■□□□□ 0.44
CDK5RAP3-203ENST00000577442 CABP1Q9NZU7 370 aa17.8■□□□□ 0.44
CDK5RAP3-203ENST00000577442 NINLQ9Y2I6 1382 aa17.79■□□□□ 0.44
CDK5RAP3-203ENST00000577442 ALS2Q96Q42 1657 aa17.79■□□□□ 0.44
CDK5RAP3-203ENST00000577442 LRP6O75581 1613 aa17.79■□□□□ 0.44
CDK5RAP3-203ENST00000577442 DISP3Q9P2K9 1392 aa17.79■□□□□ 0.44
CDK5RAP3-203ENST00000577442 MEX3CQ5U5Q3 659 aaKnown RBP17.78■□□□□ 0.44
CDK5RAP3-203ENST00000577442 PHF23Q9BUL5 403 aaPredicted RBP17.78■□□□□ 0.44
CDK5RAP3-203ENST00000577442 AKAP12Q02952 1782 aa17.77■□□□□ 0.44
CDK5RAP3-203ENST00000577442 NUTM2BA6NNL0 878 aaPredicted RBP17.77■□□□□ 0.44
CDK5RAP3-203ENST00000577442 NUTM2EB1AL46 878 aaPredicted RBP17.77■□□□□ 0.44
CDK5RAP3-203ENST00000577442 LMOD2Q6P5Q4 547 aa17.77■□□□□ 0.44
CDK5RAP3-203ENST00000577442 NUTM2AQ8IVF1 878 aaPredicted RBP17.77■□□□□ 0.44
CDK5RAP3-203ENST00000577442 USP6P35125 1406 aa17.76■□□□□ 0.43
CDK5RAP3-203ENST00000577442 PAK3O75914 559 aaPredicted RBP17.76■□□□□ 0.43
CDK5RAP3-203ENST00000577442 HSPA5P11021 654 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms