RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 TRAK1Q9UPV9 953 aa17.23■□□□□ 0.35
TSEN54-204ENST00000577197 ZNF335Q9H4Z2 1342 aaPredicted RBP17.22■□□□□ 0.35
TSEN54-204ENST00000577197 NINLQ9Y2I6 1382 aa17.22■□□□□ 0.35
TSEN54-204ENST00000577197 ADGRB2O60241 1585 aa17.21■□□□□ 0.35
TSEN54-204ENST00000577197 EVC2Q86UK5 1308 aa17.21■□□□□ 0.34
TSEN54-204ENST00000577197 ROBO2Q9HCK4 1378 aa17.19■□□□□ 0.34
TSEN54-204ENST00000577197 KTN1Q86UP2 1357 aaKnown RBP17.18■□□□□ 0.34
TSEN54-204ENST00000577197 STRCP1A6NGW2 1772 aa17.18■□□□□ 0.34
TSEN54-204ENST00000577197 TULP4Q9NRJ4 1543 aa17.18■□□□□ 0.34
TSEN54-204ENST00000577197 MYOM1P52179 1685 aa17.18■□□□□ 0.34
TSEN54-204ENST00000577197 NCOA3Q9Y6Q9 1424 aa17.18■□□□□ 0.34
TSEN54-204ENST00000577197 LTBP4Q8N2S1 1624 aa17.18■□□□□ 0.34
TSEN54-204ENST00000577197 PROSER2Q86WR7 435 aaPredicted RBP17.17■□□□□ 0.34
TSEN54-204ENST00000577197 POGKQ9P215 609 aa17.17■□□□□ 0.34
TSEN54-204ENST00000577197 ATAD2Q6PL18 1390 aa17.16■□□□□ 0.34
TSEN54-204ENST00000577197 PRAM1Q96QH2 718 aa17.16■□□□□ 0.34
TSEN54-204ENST00000577197 LRRC7Q96NW7 1537 aa17.15■□□□□ 0.34
TSEN54-204ENST00000577197 WAPLQ7Z5K2 1190 aa17.14■□□□□ 0.33
TSEN54-204ENST00000577197 TMEM94Q12767 1356 aa17.14■□□□□ 0.33
TSEN54-204ENST00000577197 PLEKHH1Q9ULM0 1364 aa17.14■□□□□ 0.33
TSEN54-204ENST00000577197 ANP32CO43423 234 aa17.13■□□□□ 0.33
TSEN54-204ENST00000577197 NPC1L1Q9UHC9 1359 aa17.13■□□□□ 0.33
TSEN54-204ENST00000577197 CCER2I3L3R5 266 aa17.11■□□□□ 0.33
TSEN54-204ENST00000577197 ADGRL3Q9HAR2 1447 aa17.11■□□□□ 0.33
TSEN54-204ENST00000577197 USP32Q8NFA0 1604 aa17.1■□□□□ 0.33
TSEN54-204ENST00000577197 PER1O15534 1290 aaPredicted RBP17.09■□□□□ 0.33
TSEN54-204ENST00000577197 SAFB2Q14151 953 aaKnown RBP eCLIP17.09■□□□□ 0.33
TSEN54-204ENST00000577197 C14orf37Q86TY3 774 aa17.09■□□□□ 0.33
TSEN54-204ENST00000577197 MIER1Q8N108 512 aa17.09■□□□□ 0.33
TSEN54-204ENST00000577197 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.08■□□□□ 0.32
TSEN54-204ENST00000577197 IQSEC2Q5JU85 1478 aa17.08■□□□□ 0.32
TSEN54-204ENST00000577197 DCCP43146 1447 aa17.08■□□□□ 0.32
TSEN54-204ENST00000577197 C19orf44Q9H6X5 657 aa17.08■□□□□ 0.32
TSEN54-204ENST00000577197 MSH6P52701 1360 aa17.07■□□□□ 0.32
TSEN54-204ENST00000577197 RBM33Q96EV2 1170 aaKnown RBP17.07■□□□□ 0.32
TSEN54-204ENST00000577197 ATP7BP35670 1465 aa17.06■□□□□ 0.32
TSEN54-204ENST00000577197 ANKRD36BQ8N2N9 1353 aa17.06■□□□□ 0.32
TSEN54-204ENST00000577197 MINK1Q8N4C8 1332 aaPredicted RBP17.06■□□□□ 0.32
TSEN54-204ENST00000577197 WASLO00401 505 aaPredicted RBP17.06■□□□□ 0.32
TSEN54-204ENST00000577197 NALCNQ8IZF0 1738 aa17.06■□□□□ 0.32
TSEN54-204ENST00000577197 CDC42BPGQ6DT37 1551 aa17.06■□□□□ 0.32
TSEN54-204ENST00000577197 XIRP1Q702N8 1843 aaKnown RBP17.05■□□□□ 0.32
TSEN54-204ENST00000577197 PRKRIP1Q9H875 184 aaPredicted RBP17.05■□□□□ 0.32
TSEN54-204ENST00000577197 RALBP1Q15311 655 aa17.04■□□□□ 0.32
TSEN54-204ENST00000577197 POLR3GLQ9BT43 218 aa17.04■□□□□ 0.32
TSEN54-204ENST00000577197 PANK3Q9H999 370 aa17.04■□□□□ 0.32
TSEN54-204ENST00000577197 ANKARQ7Z5J8 1434 aa17.04■□□□□ 0.32
TSEN54-204ENST00000577197 CADPS2Q86UW7 1296 aa17.03■□□□□ 0.32
TSEN54-204ENST00000577197 CERKQ8TCT0 537 aa17.03■□□□□ 0.32
TSEN54-204ENST00000577197 CDK19Q9BWU1 502 aa17.03■□□□□ 0.32
TSEN54-204ENST00000577197 TOPAZ1Q8N9V7 1692 aa17.03■□□□□ 0.32
TSEN54-204ENST00000577197 NSD2O96028 1365 aa17.02■□□□□ 0.32
TSEN54-204ENST00000577197 ATF3P18847 181 aa17.02■□□□□ 0.32
TSEN54-204ENST00000577197 PARD3Q8TEW0 1356 aa17.02■□□□□ 0.31
TSEN54-204ENST00000577197 ITSN1Q15811 1721 aa17.01■□□□□ 0.31
TSEN54-204ENST00000577197 SRPK2P78362 688 aaKnown RBP17.01■□□□□ 0.31
TSEN54-204ENST00000577197 KNSTRNQ9Y448 316 aa17.01■□□□□ 0.31
TSEN54-204ENST00000577197 TERF2IPQ9NYB0 399 aa17■□□□□ 0.31
TSEN54-204ENST00000577197 FMN2Q9NZ56 1722 aa16.99■□□□□ 0.31
TSEN54-204ENST00000577197 AMER1Q5JTC6 1135 aaPredicted RBP16.98■□□□□ 0.31
TSEN54-204ENST00000577197 CABP2Q9NPB3 220 aa16.98■□□□□ 0.31
TSEN54-204ENST00000577197 CCDC61Q9Y6R9 512 aa16.98■□□□□ 0.31
TSEN54-204ENST00000577197 CD163L1Q9NR16 1453 aa16.98■□□□□ 0.31
TSEN54-204ENST00000577197 CPSF1Q10570 1443 aaKnown RBP16.97■□□□□ 0.31
TSEN54-204ENST00000577197 MST1RQ04912 1400 aa16.96■□□□□ 0.31
TSEN54-204ENST00000577197 AKAP12Q02952 1782 aa16.95■□□□□ 0.3
TSEN54-204ENST00000577197 A0A1W2PP64 1363 aa16.95■□□□□ 0.3
TSEN54-204ENST00000577197 TOM1O60784 492 aa16.95■□□□□ 0.3
TSEN54-204ENST00000577197 HDGFL2Q7Z4V5 671 aaPredicted RBP16.95■□□□□ 0.3
TSEN54-204ENST00000577197 SLC12A5Q9H2X9 1139 aa16.95■□□□□ 0.3
TSEN54-204ENST00000577197 PPIP5K1Q6PFW1 1433 aa16.95■□□□□ 0.3
TSEN54-204ENST00000577197 CGNL1Q0VF96 1302 aa16.95■□□□□ 0.3
TSEN54-204ENST00000577197 MYBBP1AQ9BQG0 1328 aaKnown RBP16.95■□□□□ 0.3
TSEN54-204ENST00000577197 BRD4O60885 1362 aaPredicted RBP16.94■□□□□ 0.3
TSEN54-204ENST00000577197 MON2Q7Z3U7 1717 aa16.94■□□□□ 0.3
TSEN54-204ENST00000577197 PLEKHG3A1L390 1219 aa16.94■□□□□ 0.3
TSEN54-204ENST00000577197 TMC1Q8TDI8 760 aa16.94■□□□□ 0.3
TSEN54-204ENST00000577197 NUDT16Q96DE0 195 aaKnown RBP16.94■□□□□ 0.3
TSEN54-204ENST00000577197 ZNF692Q9BU19 519 aaPredicted RBP16.94■□□□□ 0.3
TSEN54-204ENST00000577197 SLAIN2Q9P270 581 aa16.94■□□□□ 0.3
TSEN54-204ENST00000577197 NSD3Q9BZ95 1437 aa16.94■□□□□ 0.3
TSEN54-204ENST00000577197 C1orf167Q5SNV9 1468 aa16.93■□□□□ 0.3
TSEN54-204ENST00000577197 CARD14Q9BXL6 1004 aa16.93■□□□□ 0.3
TSEN54-204ENST00000577197 EDC4Q6P2E9 1401 aaKnown RBP16.93■□□□□ 0.3
TSEN54-204ENST00000577197 PRR36Q9H6K5 1346 aa16.93■□□□□ 0.3
TSEN54-204ENST00000577197 ANKRD26Q9UPS8 1709 aa16.93■□□□□ 0.3
TSEN54-204ENST00000577197 POLR3AO14802 1390 aaPredicted RBP16.91■□□□□ 0.3
TSEN54-204ENST00000577197 NUTM2FA1L443 756 aa16.91■□□□□ 0.3
TSEN54-204ENST00000577197 NLRP13Q86W25 1043 aa16.91■□□□□ 0.3
TSEN54-204ENST00000577197 CABP1Q9NZU7 370 aa16.9■□□□□ 0.3
TSEN54-204ENST00000577197 UBAP1LF5GYI3 381 aa16.89■□□□□ 0.29
TSEN54-204ENST00000577197 ESCO1Q5FWF5 840 aa16.89■□□□□ 0.29
TSEN54-204ENST00000577197 NRKQ7Z2Y5 1582 aa16.89■□□□□ 0.29
TSEN54-204ENST00000577197 INSRP06213 1382 aa16.89■□□□□ 0.29
TSEN54-204ENST00000577197 KIF20BQ96Q89 1820 aa16.88■□□□□ 0.29
TSEN54-204ENST00000577197 ORAI2Q96SN7 254 aa16.87■□□□□ 0.29
TSEN54-204ENST00000577197 PHF8Q9UPP1 1060 aa16.87■□□□□ 0.29
TSEN54-204ENST00000577197 KIF1AQ12756 1690 aa16.87■□□□□ 0.29
TSEN54-204ENST00000577197 BRINP3Q76B58 766 aa16.86■□□□□ 0.29
TSEN54-204ENST00000577197 SCAF1Q9H7N4 1312 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms