RNA–Protein interactions for RNA: ENST00000577101.5

NDE1-212, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-212ENST00000577101 FBXO41Q8TF61 875 aa14.08□□□□□ -0.16
NDE1-212ENST00000577101 DCCP43146 1447 aa14.07□□□□□ -0.16
NDE1-212ENST00000577101 ILDR1Q86SU0 546 aaPredicted RBP14.07□□□□□ -0.16
NDE1-212ENST00000577101 PRAM1Q96QH2 718 aa14.07□□□□□ -0.16
NDE1-212ENST00000577101 MSH6P52701 1360 aa14.07□□□□□ -0.16
NDE1-212ENST00000577101 UBAP1LF5GYI3 381 aa14.06□□□□□ -0.16
NDE1-212ENST00000577101 C19orf44Q9H6X5 657 aa14.06□□□□□ -0.16
NDE1-212ENST00000577101 ROCK2O75116 1388 aaKnown RBP14.05□□□□□ -0.16
NDE1-212ENST00000577101 SAFB2Q14151 953 aaKnown RBP eCLIP14.04□□□□□ -0.16
NDE1-212ENST00000577101 TIMELESSQ9UNS1 1208 aa14.04□□□□□ -0.16
NDE1-212ENST00000577101 C1orf167Q5SNV9 1468 aa14.03□□□□□ -0.16
NDE1-212ENST00000577101 TULP4Q9NRJ4 1543 aa14.03□□□□□ -0.16
NDE1-212ENST00000577101 NHSL1Q5SYE7 1610 aa14.03□□□□□ -0.16
NDE1-212ENST00000577101 TOPAZ1Q8N9V7 1692 aa14.01□□□□□ -0.17
NDE1-212ENST00000577101 TOM1O60784 492 aa14.01□□□□□ -0.17
NDE1-212ENST00000577101 PIP4K2BP78356 416 aa14.01□□□□□ -0.17
NDE1-212ENST00000577101 C14orf37Q86TY3 774 aa14.01□□□□□ -0.17
NDE1-212ENST00000577101 MINK1Q8N4C8 1332 aaPredicted RBP14□□□□□ -0.17
NDE1-212ENST00000577101 HIRIP3Q9BW71 556 aaPredicted RBP14□□□□□ -0.17
NDE1-212ENST00000577101 SLAIN2Q9P270 581 aa14□□□□□ -0.17
NDE1-212ENST00000577101 PRR36Q9H6K5 1346 aa13.99□□□□□ -0.17
NDE1-212ENST00000577101 CADPS2Q86UW7 1296 aa13.99□□□□□ -0.17
NDE1-212ENST00000577101 COL16A1Q07092 1604 aaPredicted RBP13.99□□□□□ -0.17
NDE1-212ENST00000577101 AHDC1Q5TGY3 1603 aaPredicted RBP13.99□□□□□ -0.17
NDE1-212ENST00000577101 PHLPP1O60346 1717 aa13.98□□□□□ -0.17
NDE1-212ENST00000577101 ATF3P18847 181 aa13.98□□□□□ -0.17
NDE1-212ENST00000577101 BRINP3Q76B58 766 aa13.98□□□□□ -0.17
NDE1-212ENST00000577101 CARD11Q9BXL7 1154 aa13.98□□□□□ -0.17
NDE1-212ENST00000577101 POGKQ9P215 609 aa13.98□□□□□ -0.17
NDE1-212ENST00000577101 CENPJQ9HC77 1338 aaPredicted RBP13.97□□□□□ -0.17
NDE1-212ENST00000577101 NUTM2FA1L443 756 aa13.97□□□□□ -0.17
NDE1-212ENST00000577101 ORAI2Q96SN7 254 aa13.97□□□□□ -0.17
NDE1-212ENST00000577101 ATP7BP35670 1465 aa13.97□□□□□ -0.17
NDE1-212ENST00000577101 DDX17Q92841 729 aaKnown RBP13.96□□□□□ -0.17
NDE1-212ENST00000577101 ITSN1Q15811 1721 aa13.95□□□□□ -0.18
NDE1-212ENST00000577101 WASLO00401 505 aaPredicted RBP13.95□□□□□ -0.18
NDE1-212ENST00000577101 HSPA1LP34931 641 aa13.95□□□□□ -0.18
NDE1-212ENST00000577101 KIF1AQ12756 1690 aa13.95□□□□□ -0.18
NDE1-212ENST00000577101 SCAF1Q9H7N4 1312 aaKnown RBP13.94□□□□□ -0.18
NDE1-212ENST00000577101 TESK2Q96S53 571 aa13.94□□□□□ -0.18
NDE1-212ENST00000577101 SBNO2Q9Y2G9 1366 aa13.94□□□□□ -0.18
NDE1-212ENST00000577101 ANKARQ7Z5J8 1434 aa13.93□□□□□ -0.18
NDE1-212ENST00000577101 USP47Q96K76 1375 aa13.93□□□□□ -0.18
NDE1-212ENST00000577101 TRPM3Q9HCF6 1732 aaPredicted RBP13.93□□□□□ -0.18
NDE1-212ENST00000577101 ST20-MTHFSA0A0A6YYL1 179 aa13.92□□□□□ -0.18
NDE1-212ENST00000577101 CDK19Q9BWU1 502 aa13.92□□□□□ -0.18
NDE1-212ENST00000577101 PXDNQ92626 1479 aa13.92□□□□□ -0.18
NDE1-212ENST00000577101 EIF3AQ14152 1382 aaKnown RBP13.9□□□□□ -0.18
NDE1-212ENST00000577101 AKAP12Q02952 1782 aa13.9□□□□□ -0.18
NDE1-212ENST00000577101 SHPRHQ149N8 1683 aa13.89□□□□□ -0.19
NDE1-212ENST00000577101 CABP2Q9NPB3 220 aa13.89□□□□□ -0.19
NDE1-212ENST00000577101 MYOM1P52179 1685 aa13.88□□□□□ -0.19
NDE1-212ENST00000577101 DISP3Q9P2K9 1392 aa13.88□□□□□ -0.19
NDE1-212ENST00000577101 ESCO1Q5FWF5 840 aa13.88□□□□□ -0.19
NDE1-212ENST00000577101 NUDT16Q96DE0 195 aaKnown RBP13.88□□□□□ -0.19
NDE1-212ENST00000577101 ALS2Q96Q42 1657 aa13.88□□□□□ -0.19
NDE1-212ENST00000577101 SOS2Q07890 1332 aaPredicted RBP13.87□□□□□ -0.19
NDE1-212ENST00000577101 PMFBP1Q8TBY8 1022 aa13.86□□□□□ -0.19
NDE1-212ENST00000577101 PHF8Q9UPP1 1060 aa13.86□□□□□ -0.19
NDE1-212ENST00000577101 NRKQ7Z2Y5 1582 aa13.86□□□□□ -0.19
NDE1-212ENST00000577101 CRYBG1Q9Y4K1 1723 aa13.86□□□□□ -0.19
NDE1-212ENST00000577101 CD163L1Q9NR16 1453 aa13.86□□□□□ -0.19
NDE1-212ENST00000577101 COL22A1Q8NFW1 1626 aaPredicted RBP13.86□□□□□ -0.19
NDE1-212ENST00000577101 MON2Q7Z3U7 1717 aa13.85□□□□□ -0.19
NDE1-212ENST00000577101 FOXO3O43524 673 aa13.85□□□□□ -0.19
NDE1-212ENST00000577101 HSPA5P11021 654 aaKnown RBP13.85□□□□□ -0.19
NDE1-212ENST00000577101 XPCQ01831 940 aaPredicted RBP13.85□□□□□ -0.19
NDE1-212ENST00000577101 ABCA3Q99758 1704 aa13.84□□□□□ -0.19
NDE1-212ENST00000577101 MARF1Q9Y4F3 1742 aaKnown RBP13.84□□□□□ -0.19
NDE1-212ENST00000577101 PPIP5K1Q6PFW1 1433 aa13.84□□□□□ -0.19
NDE1-212ENST00000577101 EVC2Q86UK5 1308 aa13.84□□□□□ -0.19
NDE1-212ENST00000577101 POLR3AO14802 1390 aaPredicted RBP13.83□□□□□ -0.19
NDE1-212ENST00000577101 SRPK2P78362 688 aaKnown RBP13.83□□□□□ -0.2
NDE1-212ENST00000577101 LRP6O75581 1613 aa13.82□□□□□ -0.2
NDE1-212ENST00000577101 PLEKHG3A1L390 1219 aa13.82□□□□□ -0.2
NDE1-212ENST00000577101 C11orf95C9JLR9 678 aaPredicted RBP13.82□□□□□ -0.2
NDE1-212ENST00000577101 CCDC61Q9Y6R9 512 aa13.82□□□□□ -0.2
NDE1-212ENST00000577101 PNPLA6Q8IY17 1366 aa13.82□□□□□ -0.2
NDE1-212ENST00000577101 ACEP12821 1306 aa13.81□□□□□ -0.2
NDE1-212ENST00000577101 NPHP3Q7Z494 1330 aa13.81□□□□□ -0.2
NDE1-212ENST00000577101 SSH2Q76I76 1423 aa13.81□□□□□ -0.2
NDE1-212ENST00000577101 MED1Q15648 1581 aaPredicted RBP13.8□□□□□ -0.2
NDE1-212ENST00000577101 KRT28Q7Z3Y7 464 aa13.8□□□□□ -0.2
NDE1-212ENST00000577101 CABP1Q9NZU7 370 aa13.8□□□□□ -0.2
NDE1-212ENST00000577101 CPSF1Q10570 1443 aaKnown RBP13.8□□□□□ -0.2
NDE1-212ENST00000577101 PIK3C2AO00443 1686 aa13.79□□□□□ -0.2
NDE1-212ENST00000577101 EIF4G2P78344 907 aaKnown RBP eCLIP13.79□□□□□ -0.2
NDE1-212ENST00000577101 SPATA31A3Q5VYP0 1347 aa13.78□□□□□ -0.2
NDE1-212ENST00000577101 SBNO1A3KN83 1393 aa13.78□□□□□ -0.2
NDE1-212ENST00000577101 ATAD2Q6PL18 1390 aa13.78□□□□□ -0.2
NDE1-212ENST00000577101 JCADQ9P266 1359 aa13.78□□□□□ -0.2
NDE1-212ENST00000577101 TNS3Q68CZ2 1445 aa13.78□□□□□ -0.2
NDE1-212ENST00000577101 PHRF1Q9P1Y6 1649 aaKnown RBP13.78□□□□□ -0.2
NDE1-212ENST00000577101 USP6P35125 1406 aa13.77□□□□□ -0.21
NDE1-212ENST00000577101 PUS7Q96PZ0 661 aaKnown RBP13.77□□□□□ -0.21
NDE1-212ENST00000577101 SLC12A5Q9H2X9 1139 aa13.77□□□□□ -0.21
NDE1-212ENST00000577101 USP54Q70EL1 1684 aa13.75□□□□□ -0.21
NDE1-212ENST00000577101 TMF1P82094 1093 aa13.75□□□□□ -0.21
NDE1-212ENST00000577101 NGDNQ8NEJ9 315 aaKnown RBP13.75□□□□□ -0.21
NDE1-212ENST00000577101 LRRC59Q96AG4 307 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms