RNA–Protein interactions for RNA: ENST00000575709.5

USP6-206, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 8,185 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-206ENST00000575709 FILIP1LQ4L180 1135 aa12.6□□□□□ -0.39
USP6-206ENST00000575709 SPAG9O60271 1321 aaKnown RBP12.6□□□□□ -0.39
USP6-206ENST00000575709 CCDC160A6NGH7 325 aa12.6□□□□□ -0.39
USP6-206ENST00000575709 NFXL1Q6ZNB6 911 aa12.6□□□□□ -0.39
USP6-206ENST00000575709 MAGEC2Q9UBF1 373 aaPredicted RBP12.6□□□□□ -0.39
USP6-206ENST00000575709 DHX16O60231 1041 aaKnown RBP12.6□□□□□ -0.39
USP6-206ENST00000575709 REC8O95072 547 aa12.6□□□□□ -0.39
USP6-206ENST00000575709 SRRTQ9BXP5 876 aaKnown RBP12.6□□□□□ -0.39
USP6-206ENST00000575709 CCDC113Q9H0I3 377 aa12.6□□□□□ -0.39
USP6-206ENST00000575709 SSR1P43307 286 aaKnown RBP12.6□□□□□ -0.39
USP6-206ENST00000575709 VGFO15240 615 aaPredicted RBP12.59□□□□□ -0.39
USP6-206ENST00000575709 ZKSCAN1P17029 563 aaPredicted RBP12.59□□□□□ -0.39
USP6-206ENST00000575709 CCDC27Q2M243 656 aa12.59□□□□□ -0.39
USP6-206ENST00000575709 TMCO5BA8MYB1 307 aa12.59□□□□□ -0.39
USP6-206ENST00000575709 TDO2P48775 406 aa12.59□□□□□ -0.39
USP6-206ENST00000575709 IQCEQ6IPM2 695 aa12.59□□□□□ -0.39
USP6-206ENST00000575709 DNAAF4Q8WXU2 420 aa12.59□□□□□ -0.39
USP6-206ENST00000575709 SUDS3Q9H7L9 328 aaPredicted RBP12.59□□□□□ -0.39
USP6-206ENST00000575709 GTF2F1P35269 517 aaKnown RBP eCLIP12.59□□□□□ -0.39
USP6-206ENST00000575709 WDR66Q8TBY9 1149 aa12.59□□□□□ -0.39
USP6-206ENST00000575709 CTDP1Q9Y5B0 961 aaPredicted RBP12.58□□□□□ -0.39
USP6-206ENST00000575709 BMS1Q14692 1282 aaKnown RBP12.58□□□□□ -0.4
USP6-206ENST00000575709 SERPINA10Q9UK55 444 aa12.58□□□□□ -0.4
USP6-206ENST00000575709 HDAC5Q9UQL6 1122 aa12.58□□□□□ -0.4
USP6-206ENST00000575709 FAM107BQ9H098 131 aa12.58□□□□□ -0.4
USP6-206ENST00000575709 ZNHIT6Q9NWK9 470 aaKnown RBP12.58□□□□□ -0.4
USP6-206ENST00000575709 PLIN1O60240 522 aa12.57□□□□□ -0.4
USP6-206ENST00000575709 TIGD1Q96MW7 591 aa12.57□□□□□ -0.4
USP6-206ENST00000575709 CRACR2AQ9BSW2 395 aa12.57□□□□□ -0.4
USP6-206ENST00000575709 CPSF2Q9P2I0 782 aaKnown RBP12.57□□□□□ -0.4
USP6-206ENST00000575709 SERPINC1P01008 464 aa12.57□□□□□ -0.4
USP6-206ENST00000575709 SOGA3Q5TF21 947 aa12.57□□□□□ -0.4
USP6-206ENST00000575709 ARID4AP29374 1257 aaPredicted RBP12.56□□□□□ -0.4
USP6-206ENST00000575709 UBE4AQ14139 1066 aa12.56□□□□□ -0.4
USP6-206ENST00000575709 SAFBQ15424 915 aaKnown RBP eCLIP12.56□□□□□ -0.4
USP6-206ENST00000575709 RUFY2Q8WXA3 655 aa12.56□□□□□ -0.4
USP6-206ENST00000575709 SAFB2Q14151 953 aaKnown RBP eCLIP12.56□□□□□ -0.4
USP6-206ENST00000575709 KINO60870 393 aaKnown RBP12.55□□□□□ -0.4
USP6-206ENST00000575709 KDM4AO75164 1064 aa12.55□□□□□ -0.4
USP6-206ENST00000575709 AMOTL1Q8IY63 956 aa12.55□□□□□ -0.4
USP6-206ENST00000575709 PDIA4P13667 645 aaKnown RBP12.55□□□□□ -0.4
USP6-206ENST00000575709 EEA1Q15075 1411 aa12.55□□□□□ -0.4
USP6-206ENST00000575709 PPFIBP1Q86W92 1011 aa12.55□□□□□ -0.4
USP6-206ENST00000575709 CRBNQ96SW2 442 aa12.54□□□□□ -0.4
USP6-206ENST00000575709 NAP1L3Q99457 506 aaPredicted RBP12.54□□□□□ -0.4
USP6-206ENST00000575709 PDCL3Q9H2J4 239 aa12.54□□□□□ -0.4
USP6-206ENST00000575709 ERICH2A1L162 156 aa12.54□□□□□ -0.4
USP6-206ENST00000575709 ZWINTO95229 277 aa12.54□□□□□ -0.4
USP6-206ENST00000575709 PRPF40AO75400 957 aaKnown RBP12.54□□□□□ -0.4
USP6-206ENST00000575709 SPDYE4A6NLX3 237 aa12.54□□□□□ -0.4
USP6-206ENST00000575709 TRDNQ13061 729 aa12.53□□□□□ -0.4
USP6-206ENST00000575709 DCAF11Q8TEB1 546 aa12.53□□□□□ -0.4
USP6-206ENST00000575709 NOL10Q9BSC4 688 aaKnown RBP12.53□□□□□ -0.4
USP6-206ENST00000575709 FAM184BQ9ULE4 1060 aa12.53□□□□□ -0.4
USP6-206ENST00000575709 GRPEL1Q9HAV7 217 aa12.53□□□□□ -0.4
USP6-206ENST00000575709 SARNPP82979 210 aaKnown RBP12.53□□□□□ -0.4
USP6-206ENST00000575709 PPP4R3BQ5MIZ7 849 aa12.53□□□□□ -0.4
USP6-206ENST00000575709 FAM114A1Q8IWE2 563 aa12.53□□□□□ -0.4
USP6-206ENST00000575709 UBXN4Q92575 508 aa12.53□□□□□ -0.4
USP6-206ENST00000575709 LUC7LQ9NQ29 371 aaKnown RBP12.53□□□□□ -0.4
USP6-206ENST00000575709 LUZP1Q86V48 1076 aa12.52□□□□□ -0.4
USP6-206ENST00000575709 KIAA1328Q86T90 577 aa12.52□□□□□ -0.41
USP6-206ENST00000575709 TXLNAP40222 546 aa12.52□□□□□ -0.41
USP6-206ENST00000575709 EXOC6Q8TAG9 804 aa12.51□□□□□ -0.41
USP6-206ENST00000575709 KIF3CO14782 793 aa12.51□□□□□ -0.41
USP6-206ENST00000575709 LRRFIP1Q32MZ4 808 aaKnown RBP12.51□□□□□ -0.41
USP6-206ENST00000575709 C22orf23Q9BZE7 217 aa12.51□□□□□ -0.41
USP6-206ENST00000575709 SETSIPP0DME0 302 aa12.51□□□□□ -0.41
USP6-206ENST00000575709 GOPCQ9HD26 462 aa12.51□□□□□ -0.41
USP6-206ENST00000575709 KIF3BO15066 747 aa12.51□□□□□ -0.41
USP6-206ENST00000575709 BCL2L13Q9BXK5 485 aa12.51□□□□□ -0.41
USP6-206ENST00000575709 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.51□□□□□ -0.41
USP6-206ENST00000575709 EIF3AQ14152 1382 aaKnown RBP12.51□□□□□ -0.41
USP6-206ENST00000575709 SMC1AQ14683 1233 aaKnown RBP12.51□□□□□ -0.41
USP6-206ENST00000575709 PAIP2Q9BPZ3 127 aaKnown RBP12.51□□□□□ -0.41
USP6-206ENST00000575709 BRMS1Q9HCU9 246 aa12.51□□□□□ -0.41
USP6-206ENST00000575709 BAZ1BQ9UIG0 1483 aaKnown RBP12.5□□□□□ -0.41
USP6-206ENST00000575709 ESPNB1AK53 854 aa12.5□□□□□ -0.41
USP6-206ENST00000575709 SAMD1Q6SPF0 538 aaPredicted RBP12.5□□□□□ -0.41
USP6-206ENST00000575709 PAK3O75914 559 aaPredicted RBP12.5□□□□□ -0.41
USP6-206ENST00000575709 HSPA5P11021 654 aaKnown RBP12.5□□□□□ -0.41
USP6-206ENST00000575709 CEBPZQ03701 1054 aaKnown RBP12.5□□□□□ -0.41
USP6-206ENST00000575709 TMEM132AQ24JP5 1023 aa12.5□□□□□ -0.41
USP6-206ENST00000575709 MAP9Q49MG5 647 aa12.5□□□□□ -0.41
USP6-206ENST00000575709 TXLNBQ8N3L3 684 aa12.49□□□□□ -0.41
USP6-206ENST00000575709 MBD3O95983 291 aa12.49□□□□□ -0.41
USP6-206ENST00000575709 LMAN1P49257 510 aa12.49□□□□□ -0.41
USP6-206ENST00000575709 CCDC148Q8NFR7 591 aa12.49□□□□□ -0.41
USP6-206ENST00000575709 DZIP1Q86YF9 867 aaKnown RBP12.49□□□□□ -0.41
USP6-206ENST00000575709 INTS3Q68E01 1043 aaKnown RBP12.49□□□□□ -0.41
USP6-206ENST00000575709 CCDC192P0DO97 292 aa12.49□□□□□ -0.41
USP6-206ENST00000575709 SWAP70Q9UH65 585 aa12.49□□□□□ -0.41
USP6-206ENST00000575709 IFFO1Q0D2I5 559 aa12.48□□□□□ -0.41
USP6-206ENST00000575709 CASQ1P31415 396 aa12.48□□□□□ -0.41
USP6-206ENST00000575709 FLIIQ13045 1269 aa12.48□□□□□ -0.41
USP6-206ENST00000575709 RRP1P56182 461 aaKnown RBP12.48□□□□□ -0.41
USP6-206ENST00000575709 KIF7Q2M1P5 1343 aa12.48□□□□□ -0.41
USP6-206ENST00000575709 DHX8Q14562 1220 aaKnown RBP12.47□□□□□ -0.41
USP6-206ENST00000575709 GBP3Q9H0R5 595 aa12.47□□□□□ -0.41
USP6-206ENST00000575709 CDK5RAP3Q96JB5 506 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms