RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 UPF1Q92900 1129 aaKnown RBP eCLIP15.61■□□□□ 0.09
TVP23B-208ENST00000575261 ADGRF5Q8IZF2 1346 aa15.6■□□□□ 0.09
TVP23B-208ENST00000575261 RGS12O14924 1447 aa15.6■□□□□ 0.09
TVP23B-208ENST00000575261 PIK3C2GO75747 1445 aa15.6■□□□□ 0.09
TVP23B-208ENST00000575261 MPHOSPH9Q99550 1183 aa15.59■□□□□ 0.09
TVP23B-208ENST00000575261 NPHP3Q7Z494 1330 aa15.59■□□□□ 0.09
TVP23B-208ENST00000575261 ADAMTS2O95450 1211 aa15.58■□□□□ 0.08
TVP23B-208ENST00000575261 RBM6P78332 1123 aaKnown RBP15.58■□□□□ 0.08
TVP23B-208ENST00000575261 RGL3Q3MIN7 710 aa15.58■□□□□ 0.08
TVP23B-208ENST00000575261 LRPPRCP42704 1394 aaKnown RBP15.58■□□□□ 0.08
TVP23B-208ENST00000575261 NGLY1Q96IV0 654 aa15.57■□□□□ 0.08
TVP23B-208ENST00000575261 QTRT2Q9H974 415 aaKnown RBP15.57■□□□□ 0.08
TVP23B-208ENST00000575261 PXDNQ92626 1479 aa15.57■□□□□ 0.08
TVP23B-208ENST00000575261 ESCO1Q5FWF5 840 aa15.56■□□□□ 0.08
TVP23B-208ENST00000575261 ACIN1Q9UKV3 1341 aaKnown RBP15.56■□□□□ 0.08
TVP23B-208ENST00000575261 ABCC11Q96J66 1382 aa15.56■□□□□ 0.08
TVP23B-208ENST00000575261 MYOM2P54296 1465 aa15.56■□□□□ 0.08
TVP23B-208ENST00000575261 FMN2Q9NZ56 1722 aa15.55■□□□□ 0.08
TVP23B-208ENST00000575261 KIF1AQ12756 1690 aa15.55■□□□□ 0.08
TVP23B-208ENST00000575261 STK26Q9P289 416 aa15.55■□□□□ 0.08
TVP23B-208ENST00000575261 EP400Q96L91 3159 aa15.55■□□□□ 0.08
TVP23B-208ENST00000575261 YTHDC2Q9H6S0 1430 aaKnown RBP15.54■□□□□ 0.08
TVP23B-208ENST00000575261 MARF1Q9Y4F3 1742 aaKnown RBP15.54■□□□□ 0.08
TVP23B-208ENST00000575261 WAPLQ7Z5K2 1190 aa15.53■□□□□ 0.08
TVP23B-208ENST00000575261 USP21Q9UK80 565 aa15.53■□□□□ 0.08
TVP23B-208ENST00000575261 PLEKHH1Q9ULM0 1364 aa15.52■□□□□ 0.08
TVP23B-208ENST00000575261 TMEM132EQ6IEE7 984 aa15.52■□□□□ 0.08
TVP23B-208ENST00000575261 NRXN1Q9ULB1 1477 aa15.52■□□□□ 0.07
TVP23B-208ENST00000575261 FOXO3O43524 673 aa15.51■□□□□ 0.07
TVP23B-208ENST00000575261 FNBP4Q8N3X1 1017 aaPredicted RBP15.51■□□□□ 0.07
TVP23B-208ENST00000575261 TRPC5Q9UL62 973 aaPredicted RBP15.51■□□□□ 0.07
TVP23B-208ENST00000575261 ATRNO75882 1429 aa15.51■□□□□ 0.07
TVP23B-208ENST00000575261 NUTM2FA1L443 756 aa15.5■□□□□ 0.07
TVP23B-208ENST00000575261 SRCAPQ6ZRS2 3230 aa15.49■□□□□ 0.07
TVP23B-208ENST00000575261 XPCQ01831 940 aaPredicted RBP15.49■□□□□ 0.07
TVP23B-208ENST00000575261 ATAD2Q6PL18 1390 aa15.49■□□□□ 0.07
TVP23B-208ENST00000575261 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.48■□□□□ 0.07
TVP23B-208ENST00000575261 SIRT1Q96EB6 747 aa15.47■□□□□ 0.07
TVP23B-208ENST00000575261 C14orf93Q9H972 538 aaKnown RBP15.47■□□□□ 0.07
TVP23B-208ENST00000575261 DHX57Q6P158 1386 aaKnown RBP15.47■□□□□ 0.07
TVP23B-208ENST00000575261 USP32Q8NFA0 1604 aa15.46■□□□□ 0.07
TVP23B-208ENST00000575261 BCL9LQ86UU0 1499 aa15.46■□□□□ 0.07
TVP23B-208ENST00000575261 RAB3GAP2Q9H2M9 1393 aa15.46■□□□□ 0.07
TVP23B-208ENST00000575261 RGPD8O14715 1765 aaPredicted RBP15.45■□□□□ 0.06
TVP23B-208ENST00000575261 DLC1Q96QB1 1528 aa15.45■□□□□ 0.06
TVP23B-208ENST00000575261 SPATA31A3Q5VYP0 1347 aa15.44■□□□□ 0.06
TVP23B-208ENST00000575261 TNS3Q68CZ2 1445 aa15.44■□□□□ 0.06
TVP23B-208ENST00000575261 ADGRB2O60241 1585 aa15.44■□□□□ 0.06
TVP23B-208ENST00000575261 CFAP70Q5T0N1 1121 aa15.43■□□□□ 0.06
TVP23B-208ENST00000575261 SLIT2O94813 1529 aa15.43■□□□□ 0.06
TVP23B-208ENST00000575261 PHF8Q9UPP1 1060 aa15.42■□□□□ 0.06
TVP23B-208ENST00000575261 ABCA3Q99758 1704 aa15.42■□□□□ 0.06
TVP23B-208ENST00000575261 ADGRB1O14514 1584 aa15.41■□□□□ 0.06
TVP23B-208ENST00000575261 KRT28Q7Z3Y7 464 aa15.41■□□□□ 0.06
TVP23B-208ENST00000575261 PRAM1Q96QH2 718 aa15.41■□□□□ 0.06
TVP23B-208ENST00000575261 ANKARQ7Z5J8 1434 aa15.41■□□□□ 0.06
TVP23B-208ENST00000575261 GJD4Q96KN9 370 aaPredicted RBP15.4■□□□□ 0.06
TVP23B-208ENST00000575261 GLI3P10071 1580 aa15.4■□□□□ 0.06
TVP23B-208ENST00000575261 SBNO1A3KN83 1393 aa15.39■□□□□ 0.05
TVP23B-208ENST00000575261 PSME1Q06323 249 aa15.39■□□□□ 0.05
TVP23B-208ENST00000575261 SAFB2Q14151 953 aaKnown RBP eCLIP15.39■□□□□ 0.05
TVP23B-208ENST00000575261 UNC5CLQ8IV45 518 aa15.39■□□□□ 0.05
TVP23B-208ENST00000575261 POGKQ9P215 609 aa15.39■□□□□ 0.05
TVP23B-208ENST00000575261 NWD2Q9ULI1 1742 aa15.39■□□□□ 0.05
TVP23B-208ENST00000575261 RALGAPBQ86X10 1494 aa15.39■□□□□ 0.05
TVP23B-208ENST00000575261 PLCH1Q4KWH8 1693 aa15.38■□□□□ 0.05
TVP23B-208ENST00000575261 ARHGEF10O15013 1369 aa15.38■□□□□ 0.05
TVP23B-208ENST00000575261 HAP1P54257 671 aaPredicted RBP15.38■□□□□ 0.05
TVP23B-208ENST00000575261 EIF3AQ14152 1382 aaKnown RBP15.37■□□□□ 0.05
TVP23B-208ENST00000575261 TULP4Q9NRJ4 1543 aa15.36■□□□□ 0.05
TVP23B-208ENST00000575261 TRPM3Q9HCF6 1732 aaPredicted RBP15.35■□□□□ 0.05
TVP23B-208ENST00000575261 LMOD2Q6P5Q4 547 aa15.34■□□□□ 0.05
TVP23B-208ENST00000575261 CCDC125Q86Z20 511 aa15.34■□□□□ 0.05
TVP23B-208ENST00000575261 TRAK1Q9UPV9 953 aa15.34■□□□□ 0.05
TVP23B-208ENST00000575261 ALS2Q96Q42 1657 aa15.33■□□□□ 0.04
TVP23B-208ENST00000575261 PMFBP1Q8TBY8 1022 aa15.33■□□□□ 0.04
TVP23B-208ENST00000575261 CABLES1Q8TDN4 633 aa15.33■□□□□ 0.04
TVP23B-208ENST00000575261 STAC3Q96MF2 364 aa15.33■□□□□ 0.04
TVP23B-208ENST00000575261 ITSN1Q15811 1721 aa15.32■□□□□ 0.04
TVP23B-208ENST00000575261 ARHGEF28Q8N1W1 1705 aaKnown RBP15.32■□□□□ 0.04
TVP23B-208ENST00000575261 BRWD3Q6RI45 1802 aa15.32■□□□□ 0.04
TVP23B-208ENST00000575261 DCAF11Q8TEB1 546 aa15.32■□□□□ 0.04
TVP23B-208ENST00000575261 HIRIP3Q9BW71 556 aaPredicted RBP15.32■□□□□ 0.04
TVP23B-208ENST00000575261 NRAPQ86VF7 1730 aa15.31■□□□□ 0.04
TVP23B-208ENST00000575261 PLEKHG5O94827 1062 aa15.31■□□□□ 0.04
TVP23B-208ENST00000575261 VPS72Q15906 364 aa15.31■□□□□ 0.04
TVP23B-208ENST00000575261 KDM2AQ9Y2K7 1162 aa15.31■□□□□ 0.04
TVP23B-208ENST00000575261 MINK1Q8N4C8 1332 aaPredicted RBP15.31■□□□□ 0.04
TVP23B-208ENST00000575261 GPRASP1Q5JY77 1395 aa15.31■□□□□ 0.04
TVP23B-208ENST00000575261 BLMP54132 1417 aaPredicted RBP15.31■□□□□ 0.04
TVP23B-208ENST00000575261 COL14A1Q05707 1796 aaKnown RBP15.29■□□□□ 0.04
TVP23B-208ENST00000575261 PRR36Q9H6K5 1346 aa15.29■□□□□ 0.04
TVP23B-208ENST00000575261 WASLO00401 505 aaPredicted RBP15.29■□□□□ 0.04
TVP23B-208ENST00000575261 HRCP23327 699 aa15.29■□□□□ 0.04
TVP23B-208ENST00000575261 ZRANB1Q9UGI0 708 aa15.29■□□□□ 0.04
TVP23B-208ENST00000575261 CCDC9Q9Y3X0 531 aaKnown RBP15.29■□□□□ 0.04
TVP23B-208ENST00000575261 CRYBG1Q9Y4K1 1723 aa15.29■□□□□ 0.04
TVP23B-208ENST00000575261 ATP7BP35670 1465 aa15.27■□□□□ 0.04
TVP23B-208ENST00000575261 SEPT12Q8IYM1 358 aa15.27■□□□□ 0.04
TVP23B-208ENST00000575261 KIAA1210Q9ULL0 1709 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms