RNA–Protein interactions for RNA: ENST00000575156.5

ERCC4-207, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC4, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-207ENST00000575156 CPS1P31327 1500 aa19.01■□□□□ 0.63
ERCC4-207ENST00000575156 MYOM1P52179 1685 aa19.01■□□□□ 0.63
ERCC4-207ENST00000575156 NPHP4O75161 1426 aaPredicted RBP19.01■□□□□ 0.63
ERCC4-207ENST00000575156 FAM135BQ49AJ0 1406 aa19■□□□□ 0.63
ERCC4-207ENST00000575156 PER1O15534 1290 aaPredicted RBP19■□□□□ 0.63
ERCC4-207ENST00000575156 SIRT1Q96EB6 747 aa19■□□□□ 0.63
ERCC4-207ENST00000575156 PRKRIP1Q9H875 184 aaPredicted RBP18.99■□□□□ 0.63
ERCC4-207ENST00000575156 SRPK2P78362 688 aaKnown RBP18.97■□□□□ 0.63
ERCC4-207ENST00000575156 CDK19Q9BWU1 502 aa18.97■□□□□ 0.63
ERCC4-207ENST00000575156 SLC12A5Q9H2X9 1139 aa18.97■□□□□ 0.63
ERCC4-207ENST00000575156 KCNA6P17658 529 aa18.97■□□□□ 0.63
ERCC4-207ENST00000575156 TMC1Q8TDI8 760 aa18.97■□□□□ 0.63
ERCC4-207ENST00000575156 LMTK3Q96Q04 1460 aa18.96■□□□□ 0.63
ERCC4-207ENST00000575156 PIK3R4Q99570 1358 aa18.94■□□□□ 0.62
ERCC4-207ENST00000575156 XRN1Q8IZH2 1706 aaKnown RBP18.94■□□□□ 0.62
ERCC4-207ENST00000575156 PUS7Q96PZ0 661 aaKnown RBP18.94■□□□□ 0.62
ERCC4-207ENST00000575156 PTCH1Q13635 1447 aa18.93■□□□□ 0.62
ERCC4-207ENST00000575156 CARD14Q9BXL6 1004 aa18.93■□□□□ 0.62
ERCC4-207ENST00000575156 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.93■□□□□ 0.62
ERCC4-207ENST00000575156 WASLO00401 505 aaPredicted RBP18.92■□□□□ 0.62
ERCC4-207ENST00000575156 CCDC184Q52MB2 194 aa18.91■□□□□ 0.62
ERCC4-207ENST00000575156 CC2D1BQ5T0F9 858 aaKnown RBP18.91■□□□□ 0.62
ERCC4-207ENST00000575156 CCER2I3L3R5 266 aa18.9■□□□□ 0.62
ERCC4-207ENST00000575156 RBM33Q96EV2 1170 aaKnown RBP18.9■□□□□ 0.62
ERCC4-207ENST00000575156 KNSTRNQ9Y448 316 aa18.89■□□□□ 0.62
ERCC4-207ENST00000575156 CHD2O14647 1828 aaKnown RBP18.89■□□□□ 0.61
ERCC4-207ENST00000575156 ATAD2Q6PL18 1390 aa18.89■□□□□ 0.61
ERCC4-207ENST00000575156 AMER1Q5JTC6 1135 aaPredicted RBP18.88■□□□□ 0.61
ERCC4-207ENST00000575156 YTHDC1Q96MU7 727 aaKnown RBP18.87■□□□□ 0.61
ERCC4-207ENST00000575156 CABP1Q9NZU7 370 aa18.87■□□□□ 0.61
ERCC4-207ENST00000575156 KTN1Q86UP2 1357 aaKnown RBP18.86■□□□□ 0.61
ERCC4-207ENST00000575156 NUTM2FA1L443 756 aa18.86■□□□□ 0.61
ERCC4-207ENST00000575156 PRR36Q9H6K5 1346 aa18.86■□□□□ 0.61
ERCC4-207ENST00000575156 ADGRB2O60241 1585 aa18.85■□□□□ 0.61
ERCC4-207ENST00000575156 NUDT16Q96DE0 195 aaKnown RBP18.85■□□□□ 0.61
ERCC4-207ENST00000575156 NSD3Q9BZ95 1437 aa18.85■□□□□ 0.61
ERCC4-207ENST00000575156 A0A1W2PP64 1363 aa18.84■□□□□ 0.61
ERCC4-207ENST00000575156 ANKRD36BQ8N2N9 1353 aa18.84■□□□□ 0.61
ERCC4-207ENST00000575156 PARD3Q8TEW0 1356 aa18.84■□□□□ 0.61
ERCC4-207ENST00000575156 CD163L1Q9NR16 1453 aa18.84■□□□□ 0.61
ERCC4-207ENST00000575156 NINLQ9Y2I6 1382 aa18.83■□□□□ 0.61
ERCC4-207ENST00000575156 STRCQ7RTU9 1775 aa18.82■□□□□ 0.6
ERCC4-207ENST00000575156 RALBP1Q15311 655 aa18.82■□□□□ 0.6
ERCC4-207ENST00000575156 ATP7BP35670 1465 aa18.82■□□□□ 0.6
ERCC4-207ENST00000575156 PPIP5K1Q6PFW1 1433 aa18.81■□□□□ 0.6
ERCC4-207ENST00000575156 CCDC61Q9Y6R9 512 aa18.8■□□□□ 0.6
ERCC4-207ENST00000575156 NWD1Q149M9 1564 aa18.8■□□□□ 0.6
ERCC4-207ENST00000575156 MYBBP1AQ9BQG0 1328 aaKnown RBP18.79■□□□□ 0.6
ERCC4-207ENST00000575156 MRS2Q9HD23 443 aa18.79■□□□□ 0.6
ERCC4-207ENST00000575156 TERF2IPQ9NYB0 399 aa18.79■□□□□ 0.6
ERCC4-207ENST00000575156 NPC1L1Q9UHC9 1359 aa18.78■□□□□ 0.6
ERCC4-207ENST00000575156 NALCNQ8IZF0 1738 aa18.77■□□□□ 0.6
ERCC4-207ENST00000575156 HDGFL2Q7Z4V5 671 aaPredicted RBP18.77■□□□□ 0.59
ERCC4-207ENST00000575156 PROSER2Q86WR7 435 aaPredicted RBP18.77■□□□□ 0.59
ERCC4-207ENST00000575156 USP32Q8NFA0 1604 aa18.76■□□□□ 0.59
ERCC4-207ENST00000575156 STRCP1A6NGW2 1772 aa18.75■□□□□ 0.59
ERCC4-207ENST00000575156 CGNL1Q0VF96 1302 aa18.74■□□□□ 0.59
ERCC4-207ENST00000575156 CPSF1Q10570 1443 aaKnown RBP18.74■□□□□ 0.59
ERCC4-207ENST00000575156 ADGRL3Q9HAR2 1447 aa18.74■□□□□ 0.59
ERCC4-207ENST00000575156 C14orf37Q86TY3 774 aa18.74■□□□□ 0.59
ERCC4-207ENST00000575156 NKTRP30414 1462 aaKnown RBP18.73■□□□□ 0.59
ERCC4-207ENST00000575156 TOPAZ1Q8N9V7 1692 aa18.72■□□□□ 0.59
ERCC4-207ENST00000575156 CDC42BPGQ6DT37 1551 aa18.72■□□□□ 0.59
ERCC4-207ENST00000575156 PPP2R1AP30153 589 aa18.72■□□□□ 0.59
ERCC4-207ENST00000575156 NLRP13Q86W25 1043 aa18.72■□□□□ 0.59
ERCC4-207ENST00000575156 PMFBP1Q8TBY8 1022 aa18.72■□□□□ 0.59
ERCC4-207ENST00000575156 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.72■□□□□ 0.59
ERCC4-207ENST00000575156 ACEP12821 1306 aa18.71■□□□□ 0.59
ERCC4-207ENST00000575156 PLEKHG3A1L390 1219 aa18.71■□□□□ 0.59
ERCC4-207ENST00000575156 GGNBP2Q9H3C7 697 aa18.71■□□□□ 0.59
ERCC4-207ENST00000575156 FYB1O15117 783 aa18.7■□□□□ 0.58
ERCC4-207ENST00000575156 FAM9BQ8IZU0 186 aa18.7■□□□□ 0.58
ERCC4-207ENST00000575156 FMN2Q9NZ56 1722 aa18.7■□□□□ 0.58
ERCC4-207ENST00000575156 ZNF335Q9H4Z2 1342 aaPredicted RBP18.7■□□□□ 0.58
ERCC4-207ENST00000575156 RGPD8O14715 1765 aaPredicted RBP18.7■□□□□ 0.58
ERCC4-207ENST00000575156 BRD4O60885 1362 aaPredicted RBP18.7■□□□□ 0.58
ERCC4-207ENST00000575156 TMEM94Q12767 1356 aa18.7■□□□□ 0.58
ERCC4-207ENST00000575156 TNNT2P45379 298 aaPredicted RBP18.7■□□□□ 0.58
ERCC4-207ENST00000575156 MORC1Q86VD1 984 aa18.7■□□□□ 0.58
ERCC4-207ENST00000575156 ANKARQ7Z5J8 1434 aa18.69■□□□□ 0.58
ERCC4-207ENST00000575156 PNISRQ8TF01 805 aaKnown RBP18.67■□□□□ 0.58
ERCC4-207ENST00000575156 EDC4Q6P2E9 1401 aaKnown RBP18.67■□□□□ 0.58
ERCC4-207ENST00000575156 NSD2O96028 1365 aa18.66■□□□□ 0.58
ERCC4-207ENST00000575156 NME9Q86XW9 330 aa18.65■□□□□ 0.58
ERCC4-207ENST00000575156 ZNF692Q9BU19 519 aaPredicted RBP18.65■□□□□ 0.58
ERCC4-207ENST00000575156 ZRANB1Q9UGI0 708 aa18.65■□□□□ 0.58
ERCC4-207ENST00000575156 AKAP12Q02952 1782 aa18.65■□□□□ 0.58
ERCC4-207ENST00000575156 C19orf44Q9H6X5 657 aa18.65■□□□□ 0.58
ERCC4-207ENST00000575156 ITSN1Q15811 1721 aa18.65■□□□□ 0.58
ERCC4-207ENST00000575156 MON2Q7Z3U7 1717 aa18.65■□□□□ 0.58
ERCC4-207ENST00000575156 NGDNQ8NEJ9 315 aaKnown RBP18.64■□□□□ 0.57
ERCC4-207ENST00000575156 USP6P35125 1406 aa18.64■□□□□ 0.57
ERCC4-207ENST00000575156 POLR3AO14802 1390 aaPredicted RBP18.64■□□□□ 0.57
ERCC4-207ENST00000575156 TTC21BQ7Z4L5 1316 aa18.62■□□□□ 0.57
ERCC4-207ENST00000575156 ESCO1Q5FWF5 840 aa18.62■□□□□ 0.57
ERCC4-207ENST00000575156 ORAI2Q96SN7 254 aa18.62■□□□□ 0.57
ERCC4-207ENST00000575156 PHF8Q9UPP1 1060 aa18.61■□□□□ 0.57
ERCC4-207ENST00000575156 LRRC7Q96NW7 1537 aa18.61■□□□□ 0.57
ERCC4-207ENST00000575156 SSH2Q76I76 1423 aa18.6■□□□□ 0.57
ERCC4-207ENST00000575156 KIF20BQ96Q89 1820 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms