RNA–Protein interactions for RNA: ENST00000574781.1

ERCC4-206, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-206ENST00000574781 SCUBE2Q9NQ36 999 aa12.16□□□□□ -0.46
ERCC4-206ENST00000574781 AMOTL2Q9Y2J4 779 aa12.16□□□□□ -0.46
ERCC4-206ENST00000574781 KDM5AP29375 1690 aaKnown RBP12.16□□□□□ -0.46
ERCC4-206ENST00000574781 ROBO1Q9Y6N7 1651 aa12.16□□□□□ -0.46
ERCC4-206ENST00000574781 ATF3P18847 181 aa12.15□□□□□ -0.46
ERCC4-206ENST00000574781 ZNF326Q5BKZ1 582 aaKnown RBP12.15□□□□□ -0.46
ERCC4-206ENST00000574781 C19orf44Q9H6X5 657 aa12.14□□□□□ -0.47
ERCC4-206ENST00000574781 NKTRP30414 1462 aaKnown RBP12.14□□□□□ -0.47
ERCC4-206ENST00000574781 TMEM131LA2VDJ0 1609 aa12.13□□□□□ -0.47
ERCC4-206ENST00000574781 POTEJP0CG39 1038 aa12.13□□□□□ -0.47
ERCC4-206ENST00000574781 MYO5BQ9ULV0 1848 aa12.13□□□□□ -0.47
ERCC4-206ENST00000574781 PLEKHG5O94827 1062 aa12.12□□□□□ -0.47
ERCC4-206ENST00000574781 MEX3CQ5U5Q3 659 aaKnown RBP12.12□□□□□ -0.47
ERCC4-206ENST00000574781 CADPS2Q86UW7 1296 aa12.12□□□□□ -0.47
ERCC4-206ENST00000574781 ROCK1Q13464 1354 aa12.12□□□□□ -0.47
ERCC4-206ENST00000574781 GCC2Q8IWJ2 1684 aa12.12□□□□□ -0.47
ERCC4-206ENST00000574781 ADAMTS13Q76LX8 1427 aa12.11□□□□□ -0.47
ERCC4-206ENST00000574781 JCADQ9P266 1359 aa12.11□□□□□ -0.47
ERCC4-206ENST00000574781 NUTM2BA6NNL0 878 aaPredicted RBP12.11□□□□□ -0.47
ERCC4-206ENST00000574781 NUTM2EB1AL46 878 aaPredicted RBP12.11□□□□□ -0.47
ERCC4-206ENST00000574781 NUTM2AQ8IVF1 878 aaPredicted RBP12.11□□□□□ -0.47
ERCC4-206ENST00000574781 NWD1Q149M9 1564 aa12.1□□□□□ -0.47
ERCC4-206ENST00000574781 CHD2O14647 1828 aaKnown RBP12.1□□□□□ -0.47
ERCC4-206ENST00000574781 E9PCH4 1651 aa12.1□□□□□ -0.47
ERCC4-206ENST00000574781 C7P10643 843 aa12.09□□□□□ -0.47
ERCC4-206ENST00000574781 MIER1Q8N108 512 aa12.09□□□□□ -0.47
ERCC4-206ENST00000574781 PTPRUQ92729 1446 aa12.09□□□□□ -0.47
ERCC4-206ENST00000574781 UNC13BO14795 1591 aa12.09□□□□□ -0.47
ERCC4-206ENST00000574781 PAK3O75914 559 aaPredicted RBP12.08□□□□□ -0.48
ERCC4-206ENST00000574781 BRINP3Q76B58 766 aa12.08□□□□□ -0.48
ERCC4-206ENST00000574781 SLC39A7Q92504 469 aa12.08□□□□□ -0.48
ERCC4-206ENST00000574781 DDX17Q92841 729 aaKnown RBP12.08□□□□□ -0.48
ERCC4-206ENST00000574781 TRIM52Q96A61 297 aa12.08□□□□□ -0.48
ERCC4-206ENST00000574781 PHLPP1O60346 1717 aa12.08□□□□□ -0.48
ERCC4-206ENST00000574781 NCOA3Q9Y6Q9 1424 aa12.07□□□□□ -0.48
ERCC4-206ENST00000574781 PIK3R4Q99570 1358 aa12.06□□□□□ -0.48
ERCC4-206ENST00000574781 METP08581 1390 aa12.05□□□□□ -0.48
ERCC4-206ENST00000574781 IQGAP3Q86VI3 1631 aa12.05□□□□□ -0.48
ERCC4-206ENST00000574781 PHF12Q96QT6 1004 aa12.05□□□□□ -0.48
ERCC4-206ENST00000574781 ZBTB47Q9UFB7 747 aaPredicted RBP12.05□□□□□ -0.48
ERCC4-206ENST00000574781 SPATA31A6Q5VVP1 1343 aa12.05□□□□□ -0.48
ERCC4-206ENST00000574781 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.04□□□□□ -0.48
ERCC4-206ENST00000574781 ZNF772Q68DY9 489 aaPredicted RBP12.04□□□□□ -0.48
ERCC4-206ENST00000574781 PLCD3Q8N3E9 789 aa12.03□□□□□ -0.48
ERCC4-206ENST00000574781 LRP6O75581 1613 aa12.03□□□□□ -0.48
ERCC4-206ENST00000574781 TRPM2O94759 1503 aa12.02□□□□□ -0.48
ERCC4-206ENST00000574781 COL16A1Q07092 1604 aaPredicted RBP12.02□□□□□ -0.49
ERCC4-206ENST00000574781 RXRBP28702 533 aa12.02□□□□□ -0.49
ERCC4-206ENST00000574781 MMRN1Q13201 1228 aa12.01□□□□□ -0.49
ERCC4-206ENST00000574781 LRRC59Q96AG4 307 aaKnown RBP12.01□□□□□ -0.49
ERCC4-206ENST00000574781 DIP2AQ14689 1571 aa12.01□□□□□ -0.49
ERCC4-206ENST00000574781 VASPP50552 380 aaPredicted RBP12□□□□□ -0.49
ERCC4-206ENST00000574781 C8orf37Q96NL8 207 aa12□□□□□ -0.49
ERCC4-206ENST00000574781 VGFO15240 615 aaPredicted RBP11.99□□□□□ -0.49
ERCC4-206ENST00000574781 ADAMTS2O95450 1211 aa11.99□□□□□ -0.49
ERCC4-206ENST00000574781 UPF1Q92900 1129 aaKnown RBP eCLIP11.99□□□□□ -0.49
ERCC4-206ENST00000574781 ORAI2Q96SN7 254 aa11.99□□□□□ -0.49
ERCC4-206ENST00000574781 AFF2P51816 1311 aa11.99□□□□□ -0.49
ERCC4-206ENST00000574781 MST1RQ04912 1400 aa11.98□□□□□ -0.49
ERCC4-206ENST00000574781 NAIPQ13075 1403 aa11.98□□□□□ -0.49
ERCC4-206ENST00000574781 QTRT2Q9H974 415 aaKnown RBP11.98□□□□□ -0.49
ERCC4-206ENST00000574781 SETD1AO15047 1707 aaKnown RBP11.97□□□□□ -0.49
ERCC4-206ENST00000574781 RGL3Q3MIN7 710 aa11.97□□□□□ -0.49
ERCC4-206ENST00000574781 NGLY1Q96IV0 654 aa11.97□□□□□ -0.49
ERCC4-206ENST00000574781 AHDC1Q5TGY3 1603 aaPredicted RBP11.97□□□□□ -0.49
ERCC4-206ENST00000574781 NRXN3Q9Y4C0 1643 aa11.97□□□□□ -0.49
ERCC4-206ENST00000574781 ASTLQ6HA08 431 aaPredicted RBP11.96□□□□□ -0.49
ERCC4-206ENST00000574781 SPHKAPQ2M3C7 1700 aa11.96□□□□□ -0.49
ERCC4-206ENST00000574781 SETBP1Q9Y6X0 1596 aa11.96□□□□□ -0.5
ERCC4-206ENST00000574781 ASXL1Q8IXJ9 1541 aa11.96□□□□□ -0.5
ERCC4-206ENST00000574781 ROBO2Q9HCK4 1378 aa11.95□□□□□ -0.5
ERCC4-206ENST00000574781 STK26Q9P289 416 aa11.95□□□□□ -0.5
ERCC4-206ENST00000574781 CLTCL1P53675 1640 aa11.95□□□□□ -0.5
ERCC4-206ENST00000574781 DCCP43146 1447 aa11.94□□□□□ -0.5
ERCC4-206ENST00000574781 SETD5Q9C0A6 1442 aa11.94□□□□□ -0.5
ERCC4-206ENST00000574781 NUTM2FA1L443 756 aa11.94□□□□□ -0.5
ERCC4-206ENST00000574781 NEXMIFQ5QGS0 1516 aa11.94□□□□□ -0.5
ERCC4-206ENST00000574781 ADGRL3Q9HAR2 1447 aa11.94□□□□□ -0.5
ERCC4-206ENST00000574781 RRBP1Q9P2E9 1410 aaKnown RBP11.94□□□□□ -0.5
ERCC4-206ENST00000574781 ATMINO43313 823 aaPredicted RBP11.93□□□□□ -0.5
ERCC4-206ENST00000574781 ESCO1Q5FWF5 840 aa11.93□□□□□ -0.5
ERCC4-206ENST00000574781 XRN1Q8IZH2 1706 aaKnown RBP11.93□□□□□ -0.5
ERCC4-206ENST00000574781 PNPLA6Q8IY17 1366 aa11.92□□□□□ -0.5
ERCC4-206ENST00000574781 RPGRIP1LQ68CZ1 1315 aa11.92□□□□□ -0.5
ERCC4-206ENST00000574781 SHPRHQ149N8 1683 aa11.92□□□□□ -0.5
ERCC4-206ENST00000574781 C1orf167Q5SNV9 1468 aa11.92□□□□□ -0.5
ERCC4-206ENST00000574781 XPCQ01831 940 aaPredicted RBP11.92□□□□□ -0.5
ERCC4-206ENST00000574781 WAPLQ7Z5K2 1190 aa11.92□□□□□ -0.5
ERCC4-206ENST00000574781 ADGRF5Q8IZF2 1346 aa11.91□□□□□ -0.5
ERCC4-206ENST00000574781 RBM6P78332 1123 aaKnown RBP11.91□□□□□ -0.5
ERCC4-206ENST00000574781 TMEM132EQ6IEE7 984 aa11.91□□□□□ -0.5
ERCC4-206ENST00000574781 FOXO3O43524 673 aa11.9□□□□□ -0.5
ERCC4-206ENST00000574781 SPNS2Q8IVW8 549 aa11.9□□□□□ -0.5
ERCC4-206ENST00000574781 USP21Q9UK80 565 aa11.9□□□□□ -0.5
ERCC4-206ENST00000574781 SOS2Q07890 1332 aaPredicted RBP11.89□□□□□ -0.51
ERCC4-206ENST00000574781 NUBP1P53384 320 aa11.89□□□□□ -0.51
ERCC4-206ENST00000574781 MPHOSPH9Q99550 1183 aa11.89□□□□□ -0.51
ERCC4-206ENST00000574781 KIF1BO60333 1816 aa11.88□□□□□ -0.51
ERCC4-206ENST00000574781 HFM1A2PYH4 1435 aa11.88□□□□□ -0.51
ERCC4-206ENST00000574781 NALCNQ8IZF0 1738 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms