RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 IL27Q8NEV9 243 aa10.9□□□□□ -0.66
CDC27-216ENST00000574304 S1PR4O95977 384 aa10.89□□□□□ -0.67
CDC27-216ENST00000574304 GGCXP38435 758 aa10.89□□□□□ -0.67
CDC27-216ENST00000574304 PPP1R18Q6NYC8 613 aa10.89□□□□□ -0.67
CDC27-216ENST00000574304 SYMPKQ92797 1274 aaKnown RBP10.89□□□□□ -0.67
CDC27-216ENST00000574304 SLC6A16Q9GZN6 736 aa10.89□□□□□ -0.67
CDC27-216ENST00000574304 C6orf229H3BNL8 230 aa10.88□□□□□ -0.67
CDC27-216ENST00000574304 CLK2P49760 499 aaKnown RBP10.88□□□□□ -0.67
CDC27-216ENST00000574304 SH3D19Q5HYK7 790 aa10.88□□□□□ -0.67
CDC27-216ENST00000574304 FAM160A2Q8N612 972 aaPredicted RBP10.88□□□□□ -0.67
CDC27-216ENST00000574304 USB1Q9BQ65 265 aaKnown RBP10.88□□□□□ -0.67
CDC27-216ENST00000574304 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.88□□□□□ -0.67
CDC27-216ENST00000574304 POLR3EQ9NVU0 708 aa10.88□□□□□ -0.67
CDC27-216ENST00000574304 LIMD1Q9UGP4 676 aa10.88□□□□□ -0.67
CDC27-216ENST00000574304 PCDHB15Q9Y5E8 787 aa10.88□□□□□ -0.67
CDC27-216ENST00000574304 MSS51Q4VC12 460 aa10.87□□□□□ -0.67
CDC27-216ENST00000574304 CSPP1Q1MSJ5 1256 aa10.86□□□□□ -0.67
CDC27-216ENST00000574304 MTMR2Q13614 643 aa10.85□□□□□ -0.67
CDC27-216ENST00000574304 SKIV2LQ15477 1246 aaKnown RBP10.85□□□□□ -0.67
CDC27-216ENST00000574304 TUSC1Q2TAM9 212 aa10.85□□□□□ -0.67
CDC27-216ENST00000574304 RETREG3Q86VR2 466 aa10.85□□□□□ -0.67
CDC27-216ENST00000574304 PRDM9Q9NQV7 894 aa10.85□□□□□ -0.67
CDC27-216ENST00000574304 RNF223E7ERA6 249 aa10.83□□□□□ -0.68
CDC27-216ENST00000574304 PRPF38BQ5VTL8 546 aaKnown RBP10.83□□□□□ -0.68
CDC27-216ENST00000574304 ZBTB3Q9H5J0 574 aa10.83□□□□□ -0.68
CDC27-216ENST00000574304 SPDYE5A6NIY4 337 aa10.82□□□□□ -0.68
CDC27-216ENST00000574304 HRCP23327 699 aa10.82□□□□□ -0.68
CDC27-216ENST00000574304 CABLES1Q8TDN4 633 aa10.82□□□□□ -0.68
CDC27-216ENST00000574304 PPEF1O14829 653 aaPredicted RBP10.81□□□□□ -0.68
CDC27-216ENST00000574304 QPCTQ16769 361 aa10.81□□□□□ -0.68
CDC27-216ENST00000574304 PROCA1Q8NCQ7 364 aaPredicted RBP10.81□□□□□ -0.68
CDC27-216ENST00000574304 ATP1B4Q9UN42 357 aaPredicted RBP10.81□□□□□ -0.68
CDC27-216ENST00000574304 LILRB3O75022 631 aa10.8□□□□□ -0.68
CDC27-216ENST00000574304 MMP16P51512 607 aa10.8□□□□□ -0.68
CDC27-216ENST00000574304 PRR7Q8TB68 274 aa10.8□□□□□ -0.68
CDC27-216ENST00000574304 GOPCQ9HD26 462 aa10.8□□□□□ -0.68
CDC27-216ENST00000574304 NUTM2BA6NNL0 878 aaPredicted RBP10.79□□□□□ -0.68
CDC27-216ENST00000574304 NUTM2EB1AL46 878 aaPredicted RBP10.79□□□□□ -0.68
CDC27-216ENST00000574304 DXOO77932 396 aaKnown RBP10.79□□□□□ -0.68
CDC27-216ENST00000574304 JUNDP17535 347 aa10.79□□□□□ -0.68
CDC27-216ENST00000574304 NUTM2DQ5VT03 806 aaPredicted RBP10.79□□□□□ -0.68
CDC27-216ENST00000574304 NUTM2AQ8IVF1 878 aaPredicted RBP10.79□□□□□ -0.68
CDC27-216ENST00000574304 ANKLE1Q8NAG6 615 aa10.79□□□□□ -0.68
CDC27-216ENST00000574304 PCMTD1Q96MG8 357 aaPredicted RBP10.78□□□□□ -0.68
CDC27-216ENST00000574304 CFAP99D6REC4 459 aa10.77□□□□□ -0.69
CDC27-216ENST00000574304 RGS20O76081 388 aa10.77□□□□□ -0.69
CDC27-216ENST00000574304 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.77□□□□□ -0.69
CDC27-216ENST00000574304 FCF1Q9Y324 198 aaKnown RBP10.77□□□□□ -0.69
CDC27-216ENST00000574304 RTL5Q5HYW3 569 aaPredicted RBP10.75□□□□□ -0.69
CDC27-216ENST00000574304 DESI1Q6ICB0 168 aa10.74□□□□□ -0.69
CDC27-216ENST00000574304 PLA2G2CQ5R387 149 aa10.73□□□□□ -0.69
CDC27-216ENST00000574304 FBXO31Q5XUX0 539 aaPredicted RBP10.73□□□□□ -0.69
CDC27-216ENST00000574304 PRKD2Q9BZL6 878 aa10.73□□□□□ -0.69
CDC27-216ENST00000574304 PPP2R2DQ66LE6 453 aa10.72□□□□□ -0.69
CDC27-216ENST00000574304 TSC1Q92574 1164 aa10.72□□□□□ -0.69
CDC27-216ENST00000574304 CCDC24Q8N4L8 307 aa10.71□□□□□ -0.69
CDC27-216ENST00000574304 SLC19A1P41440 591 aa10.7□□□□□ -0.7
CDC27-216ENST00000574304 PTPRNQ16849 979 aa10.7□□□□□ -0.7
CDC27-216ENST00000574304 EMID1Q96A84 441 aaPredicted RBP10.7□□□□□ -0.7
CDC27-216ENST00000574304 NUDT12Q9BQG2 462 aa10.7□□□□□ -0.7
CDC27-216ENST00000574304 V9GY48 417 aaPredicted RBP10.7□□□□□ -0.7
CDC27-216ENST00000574304 LIAT1Q6ZQX7 453 aa10.69□□□□□ -0.7
CDC27-216ENST00000574304 HELBQ8NG08 1087 aaPredicted RBP10.69□□□□□ -0.7
CDC27-216ENST00000574304 CCNYL3P0C7X3 344 aa10.68□□□□□ -0.7
CDC27-216ENST00000574304 LYPD8Q6UX82 237 aa10.68□□□□□ -0.7
CDC27-216ENST00000574304 ZBTB24O43167 697 aaPredicted RBP10.66□□□□□ -0.7
CDC27-216ENST00000574304 RFC5P40937 340 aa10.66□□□□□ -0.7
CDC27-216ENST00000574304 RPIAP49247 311 aa10.66□□□□□ -0.7
CDC27-216ENST00000574304 PER1O15534 1290 aaPredicted RBP10.65□□□□□ -0.7
CDC27-216ENST00000574304 EVA1BQ9NVM1 165 aa10.65□□□□□ -0.7
CDC27-216ENST00000574304 CTDSPL2Q05D32 466 aa10.64□□□□□ -0.71
CDC27-216ENST00000574304 SPRYD7Q5W111 196 aa10.64□□□□□ -0.71
CDC27-216ENST00000574304 AP1G2O75843 785 aa10.63□□□□□ -0.71
CDC27-216ENST00000574304 KCNH2Q12809 1159 aa10.63□□□□□ -0.71
CDC27-216ENST00000574304 PTCRAQ6ISU1 281 aaPredicted RBP10.63□□□□□ -0.71
CDC27-216ENST00000574304 CD2BP2O95400 341 aaKnown RBP10.62□□□□□ -0.71
CDC27-216ENST00000574304 CTHP32929 405 aa10.62□□□□□ -0.71
CDC27-216ENST00000574304 F12P00748 615 aaPredicted RBP10.61□□□□□ -0.71
CDC27-216ENST00000574304 TMEM259Q4ZIN3 620 aa10.61□□□□□ -0.71
CDC27-216ENST00000574304 TRIM32Q13049 653 aa10.6□□□□□ -0.71
CDC27-216ENST00000574304 ZNF598Q86UK7 904 aaKnown RBP10.6□□□□□ -0.71
CDC27-216ENST00000574304 UNC93B1Q9H1C4 597 aa10.6□□□□□ -0.71
CDC27-216ENST00000574304 MAP10Q9P2G4 905 aa10.6□□□□□ -0.71
CDC27-216ENST00000574304 TMEM132AQ24JP5 1023 aa10.59□□□□□ -0.71
CDC27-216ENST00000574304 ZNF697Q5TEC3 545 aa10.59□□□□□ -0.71
CDC27-216ENST00000574304 LRRN4Q8WUT4 740 aa10.58□□□□□ -0.72
CDC27-216ENST00000574304 USP17L8P0C7I0 530 aa10.57□□□□□ -0.72
CDC27-216ENST00000574304 WNT7BP56706 349 aa10.53□□□□□ -0.72
CDC27-216ENST00000574304 SKOR1P84550 965 aa10.53□□□□□ -0.72
CDC27-216ENST00000574304 BANK1Q8NDB2 785 aa10.53□□□□□ -0.72
CDC27-216ENST00000574304 BAP1Q92560 729 aa10.53□□□□□ -0.72
CDC27-216ENST00000574304 FOXC1Q12948 553 aa10.52□□□□□ -0.73
CDC27-216ENST00000574304 NR6A1Q15406 480 aa10.52□□□□□ -0.73
CDC27-216ENST00000574304 LINC01559Q495D7 138 aa10.52□□□□□ -0.73
CDC27-216ENST00000574304 TRIM67Q6ZTA4 783 aa10.52□□□□□ -0.73
CDC27-216ENST00000574304 IRX2Q9BZI1 471 aaPredicted RBP10.52□□□□□ -0.73
CDC27-216ENST00000574304 HMX1Q9NP08 348 aaPredicted RBP10.52□□□□□ -0.73
CDC27-216ENST00000574304 SH3BP2P78314 561 aa10.51□□□□□ -0.73
CDC27-216ENST00000574304 ZNF511Q8NB15 262 aa10.51□□□□□ -0.73
CDC27-216ENST00000574304 ARMC2Q8NEN0 867 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 764.1 ms