RNA–Protein interactions for RNA: ENST00000574217.1

PRPF8-210, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 310 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-210ENST00000574217 DLC1Q96QB1 1528 aa9.47□□□□□ -0.89
PRPF8-210ENST00000574217 ADGRL3Q9HAR2 1447 aa9.47□□□□□ -0.89
PRPF8-210ENST00000574217 TOM1O60784 492 aa9.46□□□□□ -0.9
PRPF8-210ENST00000574217 SIRT1Q96EB6 747 aa9.46□□□□□ -0.9
PRPF8-210ENST00000574217 C19orf44Q9H6X5 657 aa9.46□□□□□ -0.9
PRPF8-210ENST00000574217 FAM135BQ49AJ0 1406 aa9.46□□□□□ -0.9
PRPF8-210ENST00000574217 PIP4K2BP78356 416 aa9.45□□□□□ -0.9
PRPF8-210ENST00000574217 PRAM1Q96QH2 718 aa9.45□□□□□ -0.9
PRPF8-210ENST00000574217 EIF3AQ14152 1382 aaKnown RBP9.45□□□□□ -0.9
PRPF8-210ENST00000574217 USP47Q96K76 1375 aa9.45□□□□□ -0.9
PRPF8-210ENST00000574217 ATF3P18847 181 aa9.44□□□□□ -0.9
PRPF8-210ENST00000574217 EIF4G2P78344 907 aaKnown RBP eCLIP9.44□□□□□ -0.9
PRPF8-210ENST00000574217 SAFB2Q14151 953 aaKnown RBP eCLIP9.44□□□□□ -0.9
PRPF8-210ENST00000574217 POGKQ9P215 609 aa9.44□□□□□ -0.9
PRPF8-210ENST00000574217 SCAF1Q9H7N4 1312 aaKnown RBP9.44□□□□□ -0.9
PRPF8-210ENST00000574217 CDC42BPGQ6DT37 1551 aa9.43□□□□□ -0.9
PRPF8-210ENST00000574217 DCCP43146 1447 aa9.43□□□□□ -0.9
PRPF8-210ENST00000574217 CADPS2Q86UW7 1296 aa9.43□□□□□ -0.9
PRPF8-210ENST00000574217 ROBO1Q9Y6N7 1651 aa9.42□□□□□ -0.9
PRPF8-210ENST00000574217 MST1RQ04912 1400 aa9.42□□□□□ -0.9
PRPF8-210ENST00000574217 SLAIN2Q9P270 581 aa9.42□□□□□ -0.9
PRPF8-210ENST00000574217 FMN2Q9NZ56 1722 aa9.42□□□□□ -0.9
PRPF8-210ENST00000574217 QRICH2Q9H0J4 1663 aa9.42□□□□□ -0.9
PRPF8-210ENST00000574217 MINK1Q8N4C8 1332 aaPredicted RBP9.41□□□□□ -0.9
PRPF8-210ENST00000574217 HSPA5P11021 654 aaKnown RBP9.41□□□□□ -0.9
PRPF8-210ENST00000574217 RGPD8O14715 1765 aaPredicted RBP9.41□□□□□ -0.9
PRPF8-210ENST00000574217 ADGRB2O60241 1585 aa9.41□□□□□ -0.9
PRPF8-210ENST00000574217 CENPJQ9HC77 1338 aaPredicted RBP9.4□□□□□ -0.9
PRPF8-210ENST00000574217 ST20-MTHFSA0A0A6YYL1 179 aa9.4□□□□□ -0.9
PRPF8-210ENST00000574217 HIRIP3Q9BW71 556 aaPredicted RBP9.4□□□□□ -0.9
PRPF8-210ENST00000574217 C1orf167Q5SNV9 1468 aa9.4□□□□□ -0.91
PRPF8-210ENST00000574217 NUTM2FA1L443 756 aa9.39□□□□□ -0.91
PRPF8-210ENST00000574217 USP32Q8NFA0 1604 aa9.38□□□□□ -0.91
PRPF8-210ENST00000574217 BRINP3Q76B58 766 aa9.38□□□□□ -0.91
PRPF8-210ENST00000574217 SBNO2Q9Y2G9 1366 aa9.37□□□□□ -0.91
PRPF8-210ENST00000574217 PHLPP1O60346 1717 aa9.37□□□□□ -0.91
PRPF8-210ENST00000574217 WASLO00401 505 aaPredicted RBP9.37□□□□□ -0.91
PRPF8-210ENST00000574217 SLC24A1O60721 1099 aa9.37□□□□□ -0.91
PRPF8-210ENST00000574217 HSPA1LP34931 641 aa9.37□□□□□ -0.91
PRPF8-210ENST00000574217 ORAI2Q96SN7 254 aa9.37□□□□□ -0.91
PRPF8-210ENST00000574217 NHSL1Q5SYE7 1610 aa9.37□□□□□ -0.91
PRPF8-210ENST00000574217 TESK2Q96S53 571 aa9.36□□□□□ -0.91
PRPF8-210ENST00000574217 TULP4Q9NRJ4 1543 aa9.36□□□□□ -0.91
PRPF8-210ENST00000574217 PRR36Q9H6K5 1346 aa9.35□□□□□ -0.91
PRPF8-210ENST00000574217 AHDC1Q5TGY3 1603 aaPredicted RBP9.35□□□□□ -0.91
PRPF8-210ENST00000574217 MSH5O43196 834 aa9.35□□□□□ -0.91
PRPF8-210ENST00000574217 TMF1P82094 1093 aa9.35□□□□□ -0.91
PRPF8-210ENST00000574217 ESCO1Q5FWF5 840 aa9.35□□□□□ -0.91
PRPF8-210ENST00000574217 DDX17Q92841 729 aaKnown RBP9.35□□□□□ -0.91
PRPF8-210ENST00000574217 CDK19Q9BWU1 502 aa9.35□□□□□ -0.91
PRPF8-210ENST00000574217 COL16A1Q07092 1604 aaPredicted RBP9.34□□□□□ -0.91
PRPF8-210ENST00000574217 ITSN1Q15811 1721 aa9.34□□□□□ -0.91
PRPF8-210ENST00000574217 ANKARQ7Z5J8 1434 aa9.34□□□□□ -0.91
PRPF8-210ENST00000574217 ZNF316A6NFI3 1004 aaPredicted RBP9.34□□□□□ -0.91
PRPF8-210ENST00000574217 KIF1AQ12756 1690 aa9.34□□□□□ -0.91
PRPF8-210ENST00000574217 ATP7BP35670 1465 aa9.34□□□□□ -0.91
PRPF8-210ENST00000574217 EVC2Q86UK5 1308 aa9.33□□□□□ -0.92
PRPF8-210ENST00000574217 TOPAZ1Q8N9V7 1692 aa9.33□□□□□ -0.92
PRPF8-210ENST00000574217 CDCA8Q53HL2 280 aa9.33□□□□□ -0.92
PRPF8-210ENST00000574217 NUDT16Q96DE0 195 aaKnown RBP9.33□□□□□ -0.92
PRPF8-210ENST00000574217 CABP2Q9NPB3 220 aa9.33□□□□□ -0.92
PRPF8-210ENST00000574217 DISP3Q9P2K9 1392 aa9.33□□□□□ -0.92
PRPF8-210ENST00000574217 SRPK2P78362 688 aaKnown RBP9.32□□□□□ -0.92
PRPF8-210ENST00000574217 PMFBP1Q8TBY8 1022 aa9.32□□□□□ -0.92
PRPF8-210ENST00000574217 PHF8Q9UPP1 1060 aa9.32□□□□□ -0.92
PRPF8-210ENST00000574217 FOXO3O43524 673 aa9.31□□□□□ -0.92
PRPF8-210ENST00000574217 KIF7Q2M1P5 1343 aa9.31□□□□□ -0.92
PRPF8-210ENST00000574217 WASHC2AQ641Q2 1341 aa9.31□□□□□ -0.92
PRPF8-210ENST00000574217 PXDNQ92626 1479 aa9.3□□□□□ -0.92
PRPF8-210ENST00000574217 CCDC7Q96M83 1385 aa9.3□□□□□ -0.92
PRPF8-210ENST00000574217 C11orf95C9JLR9 678 aaPredicted RBP9.3□□□□□ -0.92
PRPF8-210ENST00000574217 XPCQ01831 940 aaPredicted RBP9.3□□□□□ -0.92
PRPF8-210ENST00000574217 POLR3GLQ9BT43 218 aa9.3□□□□□ -0.92
PRPF8-210ENST00000574217 SOS2Q07890 1332 aaPredicted RBP9.3□□□□□ -0.92
PRPF8-210ENST00000574217 NPHP3Q7Z494 1330 aa9.3□□□□□ -0.92
PRPF8-210ENST00000574217 ATAD2Q6PL18 1390 aa9.29□□□□□ -0.92
PRPF8-210ENST00000574217 KRT28Q7Z3Y7 464 aa9.29□□□□□ -0.92
PRPF8-210ENST00000574217 PUS7Q96PZ0 661 aaKnown RBP9.29□□□□□ -0.92
PRPF8-210ENST00000574217 CCDC61Q9Y6R9 512 aa9.29□□□□□ -0.92
PRPF8-210ENST00000574217 PPIP5K1Q6PFW1 1433 aa9.29□□□□□ -0.92
PRPF8-210ENST00000574217 SHPRHQ149N8 1683 aa9.29□□□□□ -0.92
PRPF8-210ENST00000574217 TRPM3Q9HCF6 1732 aaPredicted RBP9.28□□□□□ -0.92
PRPF8-210ENST00000574217 PLEKHG3A1L390 1219 aa9.28□□□□□ -0.92
PRPF8-210ENST00000574217 AKAP12Q02952 1782 aa9.27□□□□□ -0.92
PRPF8-210ENST00000574217 JCADQ9P266 1359 aa9.27□□□□□ -0.93
PRPF8-210ENST00000574217 PSME1Q06323 249 aa9.27□□□□□ -0.93
PRPF8-210ENST00000574217 NGDNQ8NEJ9 315 aaKnown RBP9.27□□□□□ -0.93
PRPF8-210ENST00000574217 LRRC59Q96AG4 307 aaKnown RBP9.27□□□□□ -0.93
PRPF8-210ENST00000574217 CABP1Q9NZU7 370 aa9.27□□□□□ -0.93
PRPF8-210ENST00000574217 ACEP12821 1306 aa9.27□□□□□ -0.93
PRPF8-210ENST00000574217 POLR3AO14802 1390 aaPredicted RBP9.26□□□□□ -0.93
PRPF8-210ENST00000574217 NINLQ9Y2I6 1382 aa9.26□□□□□ -0.93
PRPF8-210ENST00000574217 PNPLA6Q8IY17 1366 aa9.25□□□□□ -0.93
PRPF8-210ENST00000574217 COL22A1Q8NFW1 1626 aaPredicted RBP9.25□□□□□ -0.93
PRPF8-210ENST00000574217 TMC1Q8TDI8 760 aa9.25□□□□□ -0.93
PRPF8-210ENST00000574217 MYOM1P52179 1685 aa9.25□□□□□ -0.93
PRPF8-210ENST00000574217 ALS2Q96Q42 1657 aa9.25□□□□□ -0.93
PRPF8-210ENST00000574217 SPATA31A3Q5VYP0 1347 aa9.25□□□□□ -0.93
PRPF8-210ENST00000574217 SBNO1A3KN83 1393 aa9.24□□□□□ -0.93
PRPF8-210ENST00000574217 TNS3Q68CZ2 1445 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms