RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 CADPS2Q86UW7 1296 aa22.28■■□□□ 1.16
CCNE1-204ENST00000574121 TOM1O60784 492 aa22.27■■□□□ 1.16
CCNE1-204ENST00000574121 ATF3P18847 181 aa22.26■■□□□ 1.15
CCNE1-204ENST00000574121 CENPJQ9HC77 1338 aaPredicted RBP22.26■■□□□ 1.15
CCNE1-204ENST00000574121 NALCNQ8IZF0 1738 aa22.25■■□□□ 1.15
CCNE1-204ENST00000574121 CDC42BPGQ6DT37 1551 aa22.25■■□□□ 1.15
CCNE1-204ENST00000574121 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.23■■□□□ 1.15
CCNE1-204ENST00000574121 UBAP1LF5GYI3 381 aa22.23■■□□□ 1.15
CCNE1-204ENST00000574121 SAFB2Q14151 953 aaKnown RBP eCLIP22.23■■□□□ 1.15
CCNE1-204ENST00000574121 ADGRB2O60241 1585 aa22.22■■□□□ 1.15
CCNE1-204ENST00000574121 SBNO2Q9Y2G9 1366 aa22.21■■□□□ 1.15
CCNE1-204ENST00000574121 SLAIN2Q9P270 581 aa22.19■■□□□ 1.14
CCNE1-204ENST00000574121 MINK1Q8N4C8 1332 aaPredicted RBP22.19■■□□□ 1.14
CCNE1-204ENST00000574121 USP47Q96K76 1375 aa22.19■■□□□ 1.14
CCNE1-204ENST00000574121 SLC24A1O60721 1099 aa22.18■■□□□ 1.14
CCNE1-204ENST00000574121 ZEB1P37275 1124 aaPredicted RBP22.18■■□□□ 1.14
CCNE1-204ENST00000574121 MST1RQ04912 1400 aa22.17■■□□□ 1.14
CCNE1-204ENST00000574121 FBXO41Q8TF61 875 aa22.17■■□□□ 1.14
CCNE1-204ENST00000574121 WASLO00401 505 aaPredicted RBP22.16■■□□□ 1.14
CCNE1-204ENST00000574121 HIRIP3Q9BW71 556 aaPredicted RBP22.15■■□□□ 1.14
CCNE1-204ENST00000574121 QRICH2Q9H0J4 1663 aa22.14■■□□□ 1.14
CCNE1-204ENST00000574121 ANKARQ7Z5J8 1434 aa22.14■■□□□ 1.13
CCNE1-204ENST00000574121 ST20-MTHFSA0A0A6YYL1 179 aa22.13■■□□□ 1.13
CCNE1-204ENST00000574121 C1orf167Q5SNV9 1468 aa22.13■■□□□ 1.13
CCNE1-204ENST00000574121 EIF4G2P78344 907 aaKnown RBP eCLIP22.12■■□□□ 1.13
CCNE1-204ENST00000574121 FMN2Q9NZ56 1722 aa22.11■■□□□ 1.13
CCNE1-204ENST00000574121 EVC2Q86UK5 1308 aa22.11■■□□□ 1.13
CCNE1-204ENST00000574121 TULP4Q9NRJ4 1543 aa22.11■■□□□ 1.13
CCNE1-204ENST00000574121 PIP4K2BP78356 416 aa22.1■■□□□ 1.13
CCNE1-204ENST00000574121 TESK2Q96S53 571 aa22.1■■□□□ 1.13
CCNE1-204ENST00000574121 CDK19Q9BWU1 502 aa22.09■■□□□ 1.13
CCNE1-204ENST00000574121 SCAF1Q9H7N4 1312 aaKnown RBP22.07■■□□□ 1.12
CCNE1-204ENST00000574121 BRINP3Q76B58 766 aa22.07■■□□□ 1.12
CCNE1-204ENST00000574121 PUS7Q96PZ0 661 aaKnown RBP22.06■■□□□ 1.12
CCNE1-204ENST00000574121 SRPK2P78362 688 aaKnown RBP22.05■■□□□ 1.12
CCNE1-204ENST00000574121 ATP7BP35670 1465 aa22.04■■□□□ 1.12
CCNE1-204ENST00000574121 NUTM2FA1L443 756 aa22.04■■□□□ 1.12
CCNE1-204ENST00000574121 HSPA5P11021 654 aaKnown RBP22.04■■□□□ 1.12
CCNE1-204ENST00000574121 ESCO1Q5FWF5 840 aa22.04■■□□□ 1.12
CCNE1-204ENST00000574121 ROBO1Q9Y6N7 1651 aa22.04■■□□□ 1.12
CCNE1-204ENST00000574121 PRR36Q9H6K5 1346 aa22.04■■□□□ 1.12
CCNE1-204ENST00000574121 TMF1P82094 1093 aa22.03■■□□□ 1.12
CCNE1-204ENST00000574121 NUDT16Q96DE0 195 aaKnown RBP22.03■■□□□ 1.12
CCNE1-204ENST00000574121 ORAI2Q96SN7 254 aa22.03■■□□□ 1.12
CCNE1-204ENST00000574121 CCDC61Q9Y6R9 512 aa22.03■■□□□ 1.12
CCNE1-204ENST00000574121 ATAD2Q6PL18 1390 aa22.02■■□□□ 1.12
CCNE1-204ENST00000574121 USP32Q8NFA0 1604 aa22.02■■□□□ 1.11
CCNE1-204ENST00000574121 CDCA8Q53HL2 280 aa22.01■■□□□ 1.11
CCNE1-204ENST00000574121 CABP2Q9NPB3 220 aa22.01■■□□□ 1.11
CCNE1-204ENST00000574121 PHF8Q9UPP1 1060 aa22■■□□□ 1.11
CCNE1-204ENST00000574121 KIF1AQ12756 1690 aa21.99■■□□□ 1.11
CCNE1-204ENST00000574121 NPHP3Q7Z494 1330 aa21.98■■□□□ 1.11
CCNE1-204ENST00000574121 AHDC1Q5TGY3 1603 aaPredicted RBP21.98■■□□□ 1.11
CCNE1-204ENST00000574121 DISP3Q9P2K9 1392 aa21.97■■□□□ 1.11
CCNE1-204ENST00000574121 ITSN1Q15811 1721 aa21.97■■□□□ 1.11
CCNE1-204ENST00000574121 PLEKHG3A1L390 1219 aa21.96■■□□□ 1.11
CCNE1-204ENST00000574121 TOPAZ1Q8N9V7 1692 aa21.95■■□□□ 1.1
CCNE1-204ENST00000574121 PPIP5K1Q6PFW1 1433 aa21.95■■□□□ 1.1
CCNE1-204ENST00000574121 NINLQ9Y2I6 1382 aa21.94■■□□□ 1.1
CCNE1-204ENST00000574121 NHSL1Q5SYE7 1610 aa21.94■■□□□ 1.1
CCNE1-204ENST00000574121 POLR3AO14802 1390 aaPredicted RBP21.93■■□□□ 1.1
CCNE1-204ENST00000574121 FOXO3O43524 673 aa21.93■■□□□ 1.1
CCNE1-204ENST00000574121 RGPD8O14715 1765 aaPredicted RBP21.92■■□□□ 1.1
CCNE1-204ENST00000574121 SOS2Q07890 1332 aaPredicted RBP21.92■■□□□ 1.1
CCNE1-204ENST00000574121 HSPA1LP34931 641 aa21.92■■□□□ 1.1
CCNE1-204ENST00000574121 ILDR1Q86SU0 546 aaPredicted RBP21.92■■□□□ 1.1
CCNE1-204ENST00000574121 PMFBP1Q8TBY8 1022 aa21.92■■□□□ 1.1
CCNE1-204ENST00000574121 NGDNQ8NEJ9 315 aaKnown RBP21.91■■□□□ 1.1
CCNE1-204ENST00000574121 CABP1Q9NZU7 370 aa21.91■■□□□ 1.1
CCNE1-204ENST00000574121 ACEP12821 1306 aa21.89■■□□□ 1.1
CCNE1-204ENST00000574121 PSME1Q06323 249 aa21.89■■□□□ 1.09
CCNE1-204ENST00000574121 PXDNQ92626 1479 aa21.89■■□□□ 1.09
CCNE1-204ENST00000574121 PHLPP1O60346 1717 aa21.89■■□□□ 1.09
CCNE1-204ENST00000574121 DDX17Q92841 729 aaKnown RBP21.88■■□□□ 1.09
CCNE1-204ENST00000574121 LRRC59Q96AG4 307 aaKnown RBP21.88■■□□□ 1.09
CCNE1-204ENST00000574121 COL16A1Q07092 1604 aaPredicted RBP21.88■■□□□ 1.09
CCNE1-204ENST00000574121 BRD4O60885 1362 aaPredicted RBP21.87■■□□□ 1.09
CCNE1-204ENST00000574121 KRT28Q7Z3Y7 464 aa21.87■■□□□ 1.09
CCNE1-204ENST00000574121 ZNF692Q9BU19 519 aaPredicted RBP21.87■■□□□ 1.09
CCNE1-204ENST00000574121 SBNO1A3KN83 1393 aa21.86■■□□□ 1.09
CCNE1-204ENST00000574121 TMC1Q8TDI8 760 aa21.85■■□□□ 1.09
CCNE1-204ENST00000574121 CPSF1Q10570 1443 aaKnown RBP21.85■■□□□ 1.09
CCNE1-204ENST00000574121 TERF2IPQ9NYB0 399 aa21.84■■□□□ 1.09
CCNE1-204ENST00000574121 SLC12A5Q9H2X9 1139 aa21.83■■□□□ 1.09
CCNE1-204ENST00000574121 JCADQ9P266 1359 aa21.83■■□□□ 1.08
CCNE1-204ENST00000574121 USP6P35125 1406 aa21.82■■□□□ 1.08
CCNE1-204ENST00000574121 XPCQ01831 940 aaPredicted RBP21.82■■□□□ 1.08
CCNE1-204ENST00000574121 HDGFL2Q7Z4V5 671 aaPredicted RBP21.82■■□□□ 1.08
CCNE1-204ENST00000574121 SPATA31A3Q5VYP0 1347 aa21.81■■□□□ 1.08
CCNE1-204ENST00000574121 C11orf95C9JLR9 678 aaPredicted RBP21.81■■□□□ 1.08
CCNE1-204ENST00000574121 TNS3Q68CZ2 1445 aa21.8■■□□□ 1.08
CCNE1-204ENST00000574121 CD163L1Q9NR16 1453 aa21.8■■□□□ 1.08
CCNE1-204ENST00000574121 KIF7Q2M1P5 1343 aa21.8■■□□□ 1.08
CCNE1-204ENST00000574121 ARHGEF10O15013 1369 aa21.79■■□□□ 1.08
CCNE1-204ENST00000574121 ANKRD36BQ8N2N9 1353 aa21.79■■□□□ 1.08
CCNE1-204ENST00000574121 KTN1Q86UP2 1357 aaKnown RBP21.78■■□□□ 1.08
CCNE1-204ENST00000574121 SSH2Q76I76 1423 aa21.78■■□□□ 1.08
CCNE1-204ENST00000574121 TRPM3Q9HCF6 1732 aaPredicted RBP21.77■■□□□ 1.08
CCNE1-204ENST00000574121 A0A1W2PP64 1363 aa21.77■■□□□ 1.08
CCNE1-204ENST00000574121 PNPLA6Q8IY17 1366 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms